RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 CARD10Q9BWT7 1032 aa19.09■□□□□ 0.65
LRIF1-202ENST00000485275 OVOS2A0A0G2JMS6 1433 aa19.09■□□□□ 0.65
LRIF1-202ENST00000485275 BCL9LQ86UU0 1499 aa19.09■□□□□ 0.65
LRIF1-202ENST00000485275 SLFN5Q08AF3 891 aa19.09■□□□□ 0.65
LRIF1-202ENST00000485275 EVA1CP58658 441 aa19.08■□□□□ 0.64
LRIF1-202ENST00000485275 DUSP27Q5VZP5 1158 aa19.08■□□□□ 0.64
LRIF1-202ENST00000485275 TRMT2AQ8IZ69 625 aaKnown RBP19.08■□□□□ 0.64
LRIF1-202ENST00000485275 WDR63Q8IWG1 891 aa19.07■□□□□ 0.64
LRIF1-202ENST00000485275 GAS2L2Q8NHY3 880 aa19.07■□□□□ 0.64
LRIF1-202ENST00000485275 C8orf37Q96NL8 207 aa19.07■□□□□ 0.64
LRIF1-202ENST00000485275 ADAMTS7Q9UKP4 1686 aa19.07■□□□□ 0.64
LRIF1-202ENST00000485275 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.07■□□□□ 0.64
LRIF1-202ENST00000485275 MAP3K5Q99683 1374 aa19.06■□□□□ 0.64
LRIF1-202ENST00000485275 DISP2A7MBM2 1401 aa19.06■□□□□ 0.64
LRIF1-202ENST00000485275 MCM10Q7L590 875 aa19.06■□□□□ 0.64
LRIF1-202ENST00000485275 USP35Q9P2H5 1018 aa19.06■□□□□ 0.64
LRIF1-202ENST00000485275 RAPGEF4Q8WZA2 1011 aa19.05■□□□□ 0.64
LRIF1-202ENST00000485275 PLEKHG2Q9H7P9 1386 aa19.04■□□□□ 0.64
LRIF1-202ENST00000485275 E9PSI1 815 aa19.04■□□□□ 0.64
LRIF1-202ENST00000485275 TATP17735 454 aaPredicted RBP19.03■□□□□ 0.64
LRIF1-202ENST00000485275 PLEKHO1Q53GL0 409 aaPredicted RBP19.03■□□□□ 0.64
LRIF1-202ENST00000485275 ZNF530Q6P9A1 599 aaPredicted RBP19.03■□□□□ 0.64
LRIF1-202ENST00000485275 FNBP4Q8N3X1 1017 aaPredicted RBP19.03■□□□□ 0.64
LRIF1-202ENST00000485275 LMOD3Q0VAK6 560 aa19.02■□□□□ 0.64
LRIF1-202ENST00000485275 AMOTQ4VCS5 1084 aa19.02■□□□□ 0.64
LRIF1-202ENST00000485275 IL16Q14005 1332 aa19.02■□□□□ 0.63
LRIF1-202ENST00000485275 SPATA31A1Q5TZJ5 1347 aa19.02■□□□□ 0.63
LRIF1-202ENST00000485275 GNAT3A8MTJ3 354 aa19.01■□□□□ 0.63
LRIF1-202ENST00000485275 IL17REQ8NFR9 667 aa19.01■□□□□ 0.63
LRIF1-202ENST00000485275 TSR2Q969E8 191 aaKnown RBP19.01■□□□□ 0.63
LRIF1-202ENST00000485275 NGLY1Q96IV0 654 aa19.01■□□□□ 0.63
LRIF1-202ENST00000485275 CEMIPQ8WUJ3 1361 aa19.01■□□□□ 0.63
LRIF1-202ENST00000485275 SCN11AQ9UI33 1791 aa19.01■□□□□ 0.63
LRIF1-202ENST00000485275 FANCIQ9NVI1 1328 aa19.01■□□□□ 0.63
LRIF1-202ENST00000485275 IL2RBP14784 551 aa19.01■□□□□ 0.63
LRIF1-202ENST00000485275 UNC5CLQ8IV45 518 aa19.01■□□□□ 0.63
LRIF1-202ENST00000485275 KDM6AO15550 1401 aaPredicted RBP19■□□□□ 0.63
LRIF1-202ENST00000485275 SIPA1L3O60292 1781 aaPredicted RBP19■□□□□ 0.63
LRIF1-202ENST00000485275 SPATA31A5Q5VU36 1347 aa19■□□□□ 0.63
LRIF1-202ENST00000485275 SPATA31A7Q8IWB4 1347 aa19■□□□□ 0.63
LRIF1-202ENST00000485275 CYP27B1O15528 508 aa19■□□□□ 0.63
LRIF1-202ENST00000485275 ZNF853P0CG23 659 aa18.99■□□□□ 0.63
LRIF1-202ENST00000485275 AKAP4Q5JQC9 854 aa18.99■□□□□ 0.63
LRIF1-202ENST00000485275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.99■□□□□ 0.636e-7■■■■□ 20.8
LRIF1-202ENST00000485275 LGR6Q9HBX8 967 aa18.98■□□□□ 0.63
LRIF1-202ENST00000485275 HTATSF1O43719 755 aaKnown RBP18.98■□□□□ 0.63
LRIF1-202ENST00000485275 PHKG2P15735 406 aa18.98■□□□□ 0.63
LRIF1-202ENST00000485275 TOGARAM1Q9Y4F4 1720 aa18.98■□□□□ 0.63
LRIF1-202ENST00000485275 MPRIPQ6WCQ1 1025 aa18.97■□□□□ 0.63
LRIF1-202ENST00000485275 RTF1Q92541 710 aaKnown RBP18.97■□□□□ 0.63
LRIF1-202ENST00000485275 GLI3P10071 1580 aa18.97■□□□□ 0.63
LRIF1-202ENST00000485275 MEX3CQ5U5Q3 659 aaKnown RBP18.96■□□□□ 0.63
LRIF1-202ENST00000485275 FBXO41Q8TF61 875 aa18.96■□□□□ 0.63
LRIF1-202ENST00000485275 IFT57Q9NWB7 429 aa18.96■□□□□ 0.63
LRIF1-202ENST00000485275 SPG7Q9UQ90 795 aa18.96■□□□□ 0.63
LRIF1-202ENST00000485275 AFF2P51816 1311 aa18.96■□□□□ 0.63
LRIF1-202ENST00000485275 MBIPQ9NS73 344 aa18.96■□□□□ 0.63
LRIF1-202ENST00000485275 USP21Q9UK80 565 aa18.96■□□□□ 0.63
LRIF1-202ENST00000485275 LAS1LQ9Y4W2 734 aaKnown RBP18.96■□□□□ 0.63
LRIF1-202ENST00000485275 KDM3BQ7LBC6 1761 aa18.95■□□□□ 0.62
LRIF1-202ENST00000485275 MRC1P22897 1456 aa18.95■□□□□ 0.62
LRIF1-202ENST00000485275 VPS72Q15906 364 aa18.95■□□□□ 0.62
LRIF1-202ENST00000485275 C1orf141Q5JVX7 400 aa18.95■□□□□ 0.62
LRIF1-202ENST00000485275 ZCRB1Q8TBF4 217 aaKnown RBP18.95■□□□□ 0.62
LRIF1-202ENST00000485275 CFAP44Q96MT7 982 aa18.95■□□□□ 0.62
LRIF1-202ENST00000485275 MYH16Q9H6N6 1097 aa18.95■□□□□ 0.62
LRIF1-202ENST00000485275 TNS2Q63HR2 1409 aa18.95■□□□□ 0.62
LRIF1-202ENST00000485275 PCDH11XQ9BZA7 1347 aa18.94■□□□□ 0.62
LRIF1-202ENST00000485275 PCDH11YQ9BZA8 1340 aa18.94■□□□□ 0.62
LRIF1-202ENST00000485275 THSD7AQ9UPZ6 1657 aa18.93■□□□□ 0.62
LRIF1-202ENST00000485275 RNMTO43148 476 aaKnown RBP18.93■□□□□ 0.62
LRIF1-202ENST00000485275 CHL1O00533 1208 aa18.93■□□□□ 0.62
LRIF1-202ENST00000485275 ATRNO75882 1429 aa18.93■□□□□ 0.62
LRIF1-202ENST00000485275 GNAI1P63096 354 aa18.93■□□□□ 0.62
LRIF1-202ENST00000485275 CALD1Q05682 793 aaKnown RBP18.93■□□□□ 0.62
LRIF1-202ENST00000485275 IFNL2Q8IZJ0 200 aa18.93■□□□□ 0.62
LRIF1-202ENST00000485275 MIS18AQ9NYP9 233 aa18.93■□□□□ 0.62
LRIF1-202ENST00000485275 EXOSC9Q06265 439 aaKnown RBP18.92■□□□□ 0.62
LRIF1-202ENST00000485275 THRAP3Q9Y2W1 955 aaKnown RBP18.92■□□□□ 0.62
LRIF1-202ENST00000485275 CCDC9Q9Y3X0 531 aaKnown RBP18.92■□□□□ 0.62
LRIF1-202ENST00000485275 SUPT16HQ9Y5B9 1047 aaKnown RBP18.91■□□□□ 0.62
LRIF1-202ENST00000485275 BARGINQ6ZT62 677 aa18.91■□□□□ 0.62
LRIF1-202ENST00000485275 RCAN3Q9UKA8 241 aa18.91■□□□□ 0.62
LRIF1-202ENST00000485275 KRT24Q2M2I5 525 aa18.9■□□□□ 0.62
LRIF1-202ENST00000485275 DDX54Q8TDD1 881 aaKnown RBP18.89■□□□□ 0.61
LRIF1-202ENST00000485275 FAM98CQ17RN3 349 aaKnown RBP18.88■□□□□ 0.61
LRIF1-202ENST00000485275 TSPYL6Q8N831 410 aa18.88■□□□□ 0.61
LRIF1-202ENST00000485275 NKX1-1Q15270 411 aaPredicted RBP18.88■□□□□ 0.61
LRIF1-202ENST00000485275 C8orf58Q8NAV2 365 aa18.87■□□□□ 0.61
LRIF1-202ENST00000485275 DCAF5Q96JK2 942 aa18.87■□□□□ 0.61
LRIF1-202ENST00000485275 TSPYL4Q9UJ04 414 aa18.87■□□□□ 0.61
LRIF1-202ENST00000485275 RNF123Q5XPI4 1314 aa18.87■□□□□ 0.61
LRIF1-202ENST00000485275 DOT1LQ8TEK3 1739 aa18.87■□□□□ 0.61
LRIF1-202ENST00000485275 PAPPAQ13219 1627 aa18.86■□□□□ 0.61
LRIF1-202ENST00000485275 TAF7Q15545 349 aaPredicted RBP18.86■□□□□ 0.61
LRIF1-202ENST00000485275 ITGB4P16144 1822 aa18.86■□□□□ 0.61
LRIF1-202ENST00000485275 KCNQ3O43525 872 aa18.86■□□□□ 0.61
LRIF1-202ENST00000485275 CDCA7Q9BWT1 371 aaPredicted RBP18.86■□□□□ 0.61
LRIF1-202ENST00000485275 SLC52A2Q9HAB3 445 aa18.86■□□□□ 0.61
LRIF1-202ENST00000485275 TEFQ10587 303 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms