RNA–Protein interactions for RNA: ENST00000484588.1

PPM1F-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 5

Gene PPM1F, Length 348 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-206ENST00000484588 CABP1Q9NZU7 370 aa13.45□□□□□ -0.26
PPM1F-206ENST00000484588 LY75O60449 1722 aa13.44□□□□□ -0.26
PPM1F-206ENST00000484588 NFAT5O94916 1531 aa13.44□□□□□ -0.26
PPM1F-206ENST00000484588 SLC24A1O60721 1099 aa13.44□□□□□ -0.26
PPM1F-206ENST00000484588 IL2RBP14784 551 aa13.44□□□□□ -0.26
PPM1F-206ENST00000484588 COL23A1Q86Y22 540 aaPredicted RBP13.43□□□□□ -0.26
PPM1F-206ENST00000484588 PCDH10Q9P2E7 1040 aa13.43□□□□□ -0.26
PPM1F-206ENST00000484588 ERBB3P21860 1342 aa13.42□□□□□ -0.26
PPM1F-206ENST00000484588 ST20-MTHFSA0A0A6YYL1 179 aa13.42□□□□□ -0.26
PPM1F-206ENST00000484588 RBM46Q8TBY0 533 aaKnown RBP13.42□□□□□ -0.26
PPM1F-206ENST00000484588 KAT6BQ8WYB5 2073 aa13.41□□□□□ -0.26
PPM1F-206ENST00000484588 HMGB2P26583 209 aaKnown RBP13.41□□□□□ -0.26
PPM1F-206ENST00000484588 FSTL1Q12841 308 aa13.4□□□□□ -0.26
PPM1F-206ENST00000484588 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
PPM1F-206ENST00000484588 ANKRD36BQ8N2N9 1353 aa13.4□□□□□ -0.26
PPM1F-206ENST00000484588 IGSF1Q8N6C5 1336 aa13.39□□□□□ -0.27
PPM1F-206ENST00000484588 FLAD1Q8NFF5 587 aa13.39□□□□□ -0.27
PPM1F-206ENST00000484588 PUS7Q96PZ0 661 aaKnown RBP13.39□□□□□ -0.27
PPM1F-206ENST00000484588 TESK2Q96S53 571 aa13.39□□□□□ -0.27
PPM1F-206ENST00000484588 WWC3Q9ULE0 1092 aa13.39□□□□□ -0.27
PPM1F-206ENST00000484588 NSD2O96028 1365 aa13.39□□□□□ -0.27
PPM1F-206ENST00000484588 USP47Q96K76 1375 aa13.39□□□□□ -0.27
PPM1F-206ENST00000484588 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
PPM1F-206ENST00000484588 MSH5O43196 834 aa13.38□□□□□ -0.27
PPM1F-206ENST00000484588 KCNQ4P56696 695 aa13.38□□□□□ -0.27
PPM1F-206ENST00000484588 MSL1Q68DK7 614 aa13.38□□□□□ -0.27
PPM1F-206ENST00000484588 CCNL1Q9UK58 526 aaPredicted RBP13.38□□□□□ -0.27
PPM1F-206ENST00000484588 TMC1Q8TDI8 760 aa13.37□□□□□ -0.27
PPM1F-206ENST00000484588 NLRP2Q9NX02 1062 aa13.37□□□□□ -0.27
PPM1F-206ENST00000484588 TTC21BQ7Z4L5 1316 aa13.37□□□□□ -0.27
PPM1F-206ENST00000484588 TMF1P82094 1093 aa13.36□□□□□ -0.27
PPM1F-206ENST00000484588 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
PPM1F-206ENST00000484588 NMRK2Q9NPI5 230 aa13.35□□□□□ -0.27
PPM1F-206ENST00000484588 USP54Q70EL1 1684 aa13.34□□□□□ -0.27
PPM1F-206ENST00000484588 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
PPM1F-206ENST00000484588 DOT1LQ8TEK3 1739 aa13.34□□□□□ -0.27
PPM1F-206ENST00000484588 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
PPM1F-206ENST00000484588 HTRA3P83110 453 aa13.34□□□□□ -0.27
PPM1F-206ENST00000484588 SLC12A5Q9H2X9 1139 aa13.34□□□□□ -0.27
PPM1F-206ENST00000484588 TERF2IPQ9NYB0 399 aa13.34□□□□□ -0.27
PPM1F-206ENST00000484588 C5P01031 1676 aa13.34□□□□□ -0.27
PPM1F-206ENST00000484588 PLEKHG2Q9H7P9 1386 aa13.33□□□□□ -0.27
PPM1F-206ENST00000484588 SOX12O15370 315 aa13.33□□□□□ -0.28
PPM1F-206ENST00000484588 CDCA8Q53HL2 280 aa13.33□□□□□ -0.28
PPM1F-206ENST00000484588 HDGFL2Q7Z4V5 671 aaPredicted RBP13.33□□□□□ -0.28
PPM1F-206ENST00000484588 C16orf71Q8IYS4 520 aaPredicted RBP13.33□□□□□ -0.28
PPM1F-206ENST00000484588 SYTL4Q96C24 671 aaPredicted RBP13.33□□□□□ -0.28
PPM1F-206ENST00000484588 HSPA1AP0DMV8 641 aaKnown RBP13.32□□□□□ -0.28
PPM1F-206ENST00000484588 HSPA1BP0DMV9 641 aaKnown RBP13.32□□□□□ -0.28
PPM1F-206ENST00000484588 USP31Q70CQ4 1352 aa13.32□□□□□ -0.28
PPM1F-206ENST00000484588 NSD3Q9BZ95 1437 aa13.31□□□□□ -0.28
PPM1F-206ENST00000484588 FAM208AQ9UK61 1670 aaKnown RBP13.31□□□□□ -0.28
PPM1F-206ENST00000484588 DDX54Q8TDD1 881 aaKnown RBP13.31□□□□□ -0.28
PPM1F-206ENST00000484588 ANKRD24Q8TF21 1146 aa13.31□□□□□ -0.28
PPM1F-206ENST00000484588 EIF4G2P78344 907 aaKnown RBP eCLIP13.3□□□□□ -0.28
PPM1F-206ENST00000484588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
PPM1F-206ENST00000484588 LTN1O94822 1766 aa13.29□□□□□ -0.28
PPM1F-206ENST00000484588 PXDNLA1KZ92 1463 aa13.29□□□□□ -0.28
PPM1F-206ENST00000484588 CD163L1Q9NR16 1453 aa13.29□□□□□ -0.28
PPM1F-206ENST00000484588 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
PPM1F-206ENST00000484588 A0A1W2PP64 1363 aa13.28□□□□□ -0.28
PPM1F-206ENST00000484588 KIF13BQ9NQT8 1826 aa13.27□□□□□ -0.28
PPM1F-206ENST00000484588 SMC1BQ8NDV3 1235 aa13.27□□□□□ -0.29
PPM1F-206ENST00000484588 KDM2BQ8NHM5 1336 aa13.27□□□□□ -0.29
PPM1F-206ENST00000484588 C4BP0C0L5 1744 aa13.27□□□□□ -0.29
PPM1F-206ENST00000484588 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.29
PPM1F-206ENST00000484588 HSPA5P11021 654 aaKnown RBP13.26□□□□□ -0.29
PPM1F-206ENST00000484588 TGFB2P61812 414 aa13.26□□□□□ -0.29
PPM1F-206ENST00000484588 EDC4Q6P2E9 1401 aaKnown RBP13.26□□□□□ -0.29
PPM1F-206ENST00000484588 TNRC6CQ9HCJ0 1690 aaKnown RBP13.26□□□□□ -0.29
PPM1F-206ENST00000484588 KIAA1551Q9HCM1 1747 aa13.26□□□□□ -0.29
PPM1F-206ENST00000484588 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
PPM1F-206ENST00000484588 NME9Q86XW9 330 aa13.25□□□□□ -0.29
PPM1F-206ENST00000484588 MON2Q7Z3U7 1717 aa13.25□□□□□ -0.29
PPM1F-206ENST00000484588 PALLDQ8WX93 1383 aa13.24□□□□□ -0.29
PPM1F-206ENST00000484588 SSFA2P28290 1259 aa13.24□□□□□ -0.29
PPM1F-206ENST00000484588 ZCRB1Q8TBF4 217 aaKnown RBP13.24□□□□□ -0.29
PPM1F-206ENST00000484588 AK7Q96M32 723 aa13.24□□□□□ -0.29
PPM1F-206ENST00000484588 PKD1L3Q7Z443 1732 aa13.24□□□□□ -0.29
PPM1F-206ENST00000484588 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
PPM1F-206ENST00000484588 BCS1LQ9Y276 419 aa13.23□□□□□ -0.29
PPM1F-206ENST00000484588 CGNL1Q0VF96 1302 aa13.22□□□□□ -0.29
PPM1F-206ENST00000484588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.22□□□□□ -0.29
PPM1F-206ENST00000484588 C9orf131Q5VYM1 1079 aa13.22□□□□□ -0.29
PPM1F-206ENST00000484588 ARHGAP27Q6ZUM4 889 aa13.22□□□□□ -0.29
PPM1F-206ENST00000484588 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
PPM1F-206ENST00000484588 IP6K1Q92551 441 aa13.21□□□□□ -0.29
PPM1F-206ENST00000484588 POLR3GLQ9BT43 218 aa13.21□□□□□ -0.29
PPM1F-206ENST00000484588 MEGF6O75095 1541 aa13.21□□□□□ -0.29
PPM1F-206ENST00000484588 BRCA1P38398 1863 aaKnown RBP13.21□□□□□ -0.3
PPM1F-206ENST00000484588 ZC3H4Q9UPT8 1303 aaKnown RBP13.2□□□□□ -0.3
PPM1F-206ENST00000484588 COG3Q96JB2 828 aa13.2□□□□□ -0.3
PPM1F-206ENST00000484588 PRDM10Q9NQV6 1147 aa13.2□□□□□ -0.3
PPM1F-206ENST00000484588 ARFGEF1Q9Y6D6 1849 aa13.2□□□□□ -0.3
PPM1F-206ENST00000484588 SMARCC1Q92922 1105 aaPredicted RBP13.19□□□□□ -0.3
PPM1F-206ENST00000484588 RRAGCQ9HB90 399 aa13.19□□□□□ -0.3
PPM1F-206ENST00000484588 N4BP2Q86UW6 1770 aaPredicted RBP13.19□□□□□ -0.3
PPM1F-206ENST00000484588 FYB1O15117 783 aa13.18□□□□□ -0.3
PPM1F-206ENST00000484588 FCHSD2O94868 740 aa13.18□□□□□ -0.3
PPM1F-206ENST00000484588 PHF14O94880 888 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms