RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 ZBTB7CA1YPR0 619 aa18.11■□□□□ 0.49
CLK3-204ENST00000483723 ZC3H6P61129 1189 aaKnown RBP18.11■□□□□ 0.49
CLK3-204ENST00000483723 MCM10Q7L590 875 aa18.1■□□□□ 0.49
CLK3-204ENST00000483723 USHBP1Q8N6Y0 703 aa18.1■□□□□ 0.49
CLK3-204ENST00000483723 SSH1Q8WYL5 1049 aa18.1■□□□□ 0.49
CLK3-204ENST00000483723 LRRC59Q96AG4 307 aaKnown RBP18.09■□□□□ 0.49
CLK3-204ENST00000483723 LRRC37A3O60309 1634 aa18.09■□□□□ 0.49
CLK3-204ENST00000483723 ERBB3P21860 1342 aa18.09■□□□□ 0.49
CLK3-204ENST00000483723 GNAT3A8MTJ3 354 aa18.09■□□□□ 0.49
CLK3-204ENST00000483723 CABLES1Q8TDN4 633 aa18.09■□□□□ 0.49
CLK3-204ENST00000483723 RTF1Q92541 710 aaKnown RBP18.09■□□□□ 0.49
CLK3-204ENST00000483723 PLEKHG5O94827 1062 aa18.08■□□□□ 0.48
CLK3-204ENST00000483723 TSPYL6Q8N831 410 aa18.07■□□□□ 0.48
CLK3-204ENST00000483723 BCL2L13Q9BXK5 485 aa18.07■□□□□ 0.48
CLK3-204ENST00000483723 KIAA0232Q92628 1395 aa18.07■□□□□ 0.48
CLK3-204ENST00000483723 MAP3K5Q99683 1374 aa18.07■□□□□ 0.48
CLK3-204ENST00000483723 ZKSCAN2Q63HK3 967 aa18.06■□□□□ 0.48
CLK3-204ENST00000483723 C8orf58Q8NAV2 365 aa18.06■□□□□ 0.48
CLK3-204ENST00000483723 FRAT1Q92837 279 aaPredicted RBP18.06■□□□□ 0.48
CLK3-204ENST00000483723 SMC4Q9NTJ3 1288 aa18.06■□□□□ 0.48
CLK3-204ENST00000483723 MS4A1P11836 297 aa18.05■□□□□ 0.48
CLK3-204ENST00000483723 CANXP27824 592 aaKnown RBP18.05■□□□□ 0.48
CLK3-204ENST00000483723 IL17REQ8NFR9 667 aa18.05■□□□□ 0.48
CLK3-204ENST00000483723 PANK1Q8TE04 598 aa18.05■□□□□ 0.48
CLK3-204ENST00000483723 BABAM1Q9NWV8 329 aa18.05■□□□□ 0.48
CLK3-204ENST00000483723 FAM208AQ9UK61 1670 aaKnown RBP18.05■□□□□ 0.48
CLK3-204ENST00000483723 AAMPQ13685 434 aa18.04■□□□□ 0.48
CLK3-204ENST00000483723 TWISTNBQ3B726 338 aaPredicted RBP18.04■□□□□ 0.48
CLK3-204ENST00000483723 AMOTQ4VCS5 1084 aa18.04■□□□□ 0.48
CLK3-204ENST00000483723 PLEKHO1Q53GL0 409 aaPredicted RBP18.04■□□□□ 0.48
CLK3-204ENST00000483723 ABCA3Q99758 1704 aa18.03■□□□□ 0.48
CLK3-204ENST00000483723 CEMIPQ8WUJ3 1361 aa18.03■□□□□ 0.48
CLK3-204ENST00000483723 RLBP1P12271 317 aa18.03■□□□□ 0.48
CLK3-204ENST00000483723 MRPL50Q8N5N7 158 aaKnown RBP18.03■□□□□ 0.48
CLK3-204ENST00000483723 TNNQ9UQP3 1299 aa18.03■□□□□ 0.48
CLK3-204ENST00000483723 PLEKHG2Q9H7P9 1386 aa18.03■□□□□ 0.48
CLK3-204ENST00000483723 KIF16BQ96L93 1317 aa18.02■□□□□ 0.48
CLK3-204ENST00000483723 ATF7IPQ6VMQ6 1270 aa18.02■□□□□ 0.48
CLK3-204ENST00000483723 NOB1Q9ULX3 412 aaKnown RBP18.02■□□□□ 0.48
CLK3-204ENST00000483723 IPO8O15397 1037 aaKnown RBP18.01■□□□□ 0.47
CLK3-204ENST00000483723 HAP1P54257 671 aaPredicted RBP18.01■□□□□ 0.47
CLK3-204ENST00000483723 AKAP4Q5JQC9 854 aa18.01■□□□□ 0.47
CLK3-204ENST00000483723 DZIP1LQ8IYY4 767 aaKnown RBP18.01■□□□□ 0.47
CLK3-204ENST00000483723 ARHGAP45Q92619 1136 aa18.01■□□□□ 0.47
CLK3-204ENST00000483723 COG6Q9Y2V7 657 aa18.01■□□□□ 0.47
CLK3-204ENST00000483723 TRIM27P14373 513 aa18.01■□□□□ 0.47
CLK3-204ENST00000483723 AHDC1Q5TGY3 1603 aaPredicted RBP18■□□□□ 0.47
CLK3-204ENST00000483723 TAF7Q15545 349 aaPredicted RBP18■□□□□ 0.47
CLK3-204ENST00000483723 CHRNA2Q15822 529 aa18■□□□□ 0.47
CLK3-204ENST00000483723 ROBO1Q9Y6N7 1651 aa17.99■□□□□ 0.47
CLK3-204ENST00000483723 ELL2O00472 640 aaPredicted RBP17.99■□□□□ 0.47
CLK3-204ENST00000483723 KDM2BQ8NHM5 1336 aa17.99■□□□□ 0.47
CLK3-204ENST00000483723 MVPQ14764 893 aaKnown RBP17.98■□□□□ 0.47
CLK3-204ENST00000483723 TSPYL4Q9UJ04 414 aa17.98■□□□□ 0.47
CLK3-204ENST00000483723 ADAMTS7Q9UKP4 1686 aa17.98■□□□□ 0.47
CLK3-204ENST00000483723 ZNF530Q6P9A1 599 aaPredicted RBP17.98■□□□□ 0.47
CLK3-204ENST00000483723 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.98■□□□□ 0.47
CLK3-204ENST00000483723 MIS18AQ9NYP9 233 aa17.98■□□□□ 0.47
CLK3-204ENST00000483723 OVOS2A0A0G2JMS6 1433 aa17.97■□□□□ 0.47
CLK3-204ENST00000483723 UBAP1LF5GYI3 381 aa17.97■□□□□ 0.47
CLK3-204ENST00000483723 CLUAP1Q96AJ1 413 aa17.97■□□□□ 0.47
CLK3-204ENST00000483723 NLRP2Q9NX02 1062 aa17.97■□□□□ 0.47
CLK3-204ENST00000483723 SOS1Q07889 1333 aaPredicted RBP17.97■□□□□ 0.47
CLK3-204ENST00000483723 VIRMAQ69YN4 1812 aaKnown RBP17.96■□□□□ 0.47
CLK3-204ENST00000483723 KRT24Q2M2I5 525 aa17.96■□□□□ 0.47
CLK3-204ENST00000483723 LGR6Q9HBX8 967 aa17.96■□□□□ 0.47
CLK3-204ENST00000483723 PRDM11Q9NQV5 511 aa17.96■□□□□ 0.47
CLK3-204ENST00000483723 TSHZ2Q9NRE2 1034 aa17.96■□□□□ 0.47
CLK3-204ENST00000483723 CENPQQ7L2Z9 268 aaPredicted RBP17.95■□□□□ 0.46
CLK3-204ENST00000483723 RAPGEF4Q8WZA2 1011 aa17.95■□□□□ 0.46
CLK3-204ENST00000483723 RNMTO43148 476 aaKnown RBP17.94■□□□□ 0.46
CLK3-204ENST00000483723 CSB-PGBD3P0DP91 1061 aa17.94■□□□□ 0.46
CLK3-204ENST00000483723 TATP17735 454 aaPredicted RBP17.94■□□□□ 0.46
CLK3-204ENST00000483723 FTSJ3Q8IY81 847 aaKnown RBP17.94■□□□□ 0.46
CLK3-204ENST00000483723 WDR17Q8IZU2 1322 aa17.94■□□□□ 0.46
CLK3-204ENST00000483723 COL22A1Q8NFW1 1626 aaPredicted RBP17.94■□□□□ 0.46
CLK3-204ENST00000483723 C1orf141Q5JVX7 400 aa17.93■□□□□ 0.46
CLK3-204ENST00000483723 KDM3BQ7LBC6 1761 aa17.93■□□□□ 0.46
CLK3-204ENST00000483723 COL5A2P05997 1499 aaPredicted RBP17.93■□□□□ 0.46
CLK3-204ENST00000483723 MEGF6O75095 1541 aa17.93■□□□□ 0.46
CLK3-204ENST00000483723 PKD1L3Q7Z443 1732 aa17.92■□□□□ 0.46
CLK3-204ENST00000483723 DDX19BQ9UMR2 479 aa17.92■□□□□ 0.46
CLK3-204ENST00000483723 SIPA1L3O60292 1781 aaPredicted RBP17.92■□□□□ 0.46
CLK3-204ENST00000483723 TMEM57Q8N5G2 664 aa17.92■□□□□ 0.46
CLK3-204ENST00000483723 TOM1O60784 492 aa17.91■□□□□ 0.46
CLK3-204ENST00000483723 MPRIPQ6WCQ1 1025 aa17.91■□□□□ 0.46
CLK3-204ENST00000483723 API5Q9BZZ5 524 aaKnown RBP17.91■□□□□ 0.46
CLK3-204ENST00000483723 SPG7Q9UQ90 795 aa17.91■□□□□ 0.46
CLK3-204ENST00000483723 ABCC4O15439 1325 aa17.9■□□□□ 0.46
CLK3-204ENST00000483723 TCERG1O14776 1098 aaKnown RBP17.9■□□□□ 0.46
CLK3-204ENST00000483723 CACNA1FO60840 1977 aa17.9■□□□□ 0.46
CLK3-204ENST00000483723 SCN11AQ9UI33 1791 aa17.9■□□□□ 0.46
CLK3-204ENST00000483723 CARD10Q9BWT7 1032 aa17.89■□□□□ 0.46
CLK3-204ENST00000483723 PCDHB15Q9Y5E8 787 aa17.89■□□□□ 0.46
CLK3-204ENST00000483723 IGHDP01880 384 aa17.89■□□□□ 0.45
CLK3-204ENST00000483723 TEFQ10587 303 aa17.89■□□□□ 0.45
CLK3-204ENST00000483723 PHKG2P15735 406 aa17.88■□□□□ 0.45
CLK3-204ENST00000483723 EIF4A1P60842 406 aaKnown RBP17.88■□□□□ 0.45
CLK3-204ENST00000483723 ZBTB40Q9NUA8 1239 aa17.88■□□□□ 0.45
CLK3-204ENST00000483723 PTPRCP08575 1304 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms