RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 IRX6P78412 446 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-226ENST00000483656 CALD1Q05682 793 aaKnown RBP13.14□□□□□ -0.31
HDAC6-226ENST00000483656 EXOSC9Q06265 439 aaKnown RBP13.14□□□□□ -0.31
HDAC6-226ENST00000483656 PLEKHO1Q53GL0 409 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-226ENST00000483656 IL17REQ8NFR9 667 aa13.14□□□□□ -0.31
HDAC6-226ENST00000483656 MAP3K5Q99683 1374 aa13.14□□□□□ -0.31
HDAC6-226ENST00000483656 COL14A1Q05707 1796 aaKnown RBP13.14□□□□□ -0.31
HDAC6-226ENST00000483656 MEGF6O75095 1541 aa13.13□□□□□ -0.31
HDAC6-226ENST00000483656 GNAT3A8MTJ3 354 aa13.13□□□□□ -0.31
HDAC6-226ENST00000483656 HSPA1LP34931 641 aa13.13□□□□□ -0.31
HDAC6-226ENST00000483656 RRP1P56182 461 aaKnown RBP13.13□□□□□ -0.31
HDAC6-226ENST00000483656 GNAI1P63096 354 aa13.13□□□□□ -0.31
HDAC6-226ENST00000483656 AMOTQ4VCS5 1084 aa13.13□□□□□ -0.31
HDAC6-226ENST00000483656 LARP1Q6PKG0 1096 aaKnown RBP13.13□□□□□ -0.31
HDAC6-226ENST00000483656 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
HDAC6-226ENST00000483656 MBIPQ9NS73 344 aa13.13□□□□□ -0.31
HDAC6-226ENST00000483656 CHL1O00533 1208 aa13.12□□□□□ -0.31
HDAC6-226ENST00000483656 NEFLP07196 543 aa13.12□□□□□ -0.31
HDAC6-226ENST00000483656 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-226ENST00000483656 CARD10Q9BWT7 1032 aa13.12□□□□□ -0.31
HDAC6-226ENST00000483656 BTG4Q9NY30 223 aa13.12□□□□□ -0.31
HDAC6-226ENST00000483656 LAS1LQ9Y4W2 734 aaKnown RBP13.12□□□□□ -0.31
HDAC6-226ENST00000483656 LRRC37A3O60309 1634 aa13.12□□□□□ -0.31
HDAC6-226ENST00000483656 TATP17735 454 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-226ENST00000483656 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
HDAC6-226ENST00000483656 TOM1L2Q6ZVM7 507 aa13.11□□□□□ -0.31
HDAC6-226ENST00000483656 RAPGEF4Q8WZA2 1011 aa13.11□□□□□ -0.31
HDAC6-226ENST00000483656 RTF1Q92541 710 aaKnown RBP13.11□□□□□ -0.31
HDAC6-226ENST00000483656 STRN4Q9NRL3 753 aa13.11□□□□□ -0.31
HDAC6-226ENST00000483656 CEMIPQ8WUJ3 1361 aa13.1□□□□□ -0.31
HDAC6-226ENST00000483656 PLEKHG2Q9H7P9 1386 aa13.1□□□□□ -0.31
HDAC6-226ENST00000483656 JCADQ9P266 1359 aa13.1□□□□□ -0.31
HDAC6-226ENST00000483656 BCAR3O75815 825 aa13.1□□□□□ -0.31
HDAC6-226ENST00000483656 ADAMTS2O95450 1211 aa13.1□□□□□ -0.31
HDAC6-226ENST00000483656 RARSP54136 660 aaKnown RBP13.1□□□□□ -0.31
HDAC6-226ENST00000483656 EVA1CP58658 441 aa13.1□□□□□ -0.31
HDAC6-226ENST00000483656 LGR6Q9HBX8 967 aa13.1□□□□□ -0.31
HDAC6-226ENST00000483656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.1□□□□□ -0.311e-11■■□□□ 11.5
HDAC6-226ENST00000483656 OVOS2A0A0G2JMS6 1433 aa13.09□□□□□ -0.31
HDAC6-226ENST00000483656 NUTM2BA6NNL0 878 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-226ENST00000483656 NUTM2EB1AL46 878 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-226ENST00000483656 PLIN1O60240 522 aa13.09□□□□□ -0.31
HDAC6-226ENST00000483656 CT47B1P0C2W7 299 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-226ENST00000483656 NUTM2AQ8IVF1 878 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-226ENST00000483656 TSPYL6Q8N831 410 aa13.08□□□□□ -0.32
HDAC6-226ENST00000483656 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.32
HDAC6-226ENST00000483656 MIS18AQ9NYP9 233 aa13.08□□□□□ -0.32
HDAC6-226ENST00000483656 PKD1L3Q7Z443 1732 aa13.08□□□□□ -0.32
HDAC6-226ENST00000483656 CYP27B1O15528 508 aa13.07□□□□□ -0.32
HDAC6-226ENST00000483656 RNMTO43148 476 aaKnown RBP13.07□□□□□ -0.32
HDAC6-226ENST00000483656 VAMP4O75379 141 aa13.07□□□□□ -0.32
HDAC6-226ENST00000483656 PHKG2P15735 406 aa13.07□□□□□ -0.32
HDAC6-226ENST00000483656 MPRIPQ6WCQ1 1025 aa13.07□□□□□ -0.32
HDAC6-226ENST00000483656 SPG7Q9UQ90 795 aa13.07□□□□□ -0.32
HDAC6-226ENST00000483656 PLCH1Q4KWH8 1693 aa13.07□□□□□ -0.32
HDAC6-226ENST00000483656 ADAMTS7Q9UKP4 1686 aa13.07□□□□□ -0.32
HDAC6-226ENST00000483656 NRAPQ86VF7 1730 aa13.06□□□□□ -0.32
HDAC6-226ENST00000483656 TAF7Q15545 349 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-226ENST00000483656 KRT24Q2M2I5 525 aa13.06□□□□□ -0.32
HDAC6-226ENST00000483656 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
HDAC6-226ENST00000483656 SLIT2O94813 1529 aa13.06□□□□□ -0.32
HDAC6-226ENST00000483656 IL2RBP14784 551 aa13.05□□□□□ -0.32
HDAC6-226ENST00000483656 C20orf194Q5TEA3 1177 aa13.05□□□□□ -0.32
HDAC6-226ENST00000483656 ERICH6BQ5W0A0 696 aa13.05□□□□□ -0.32
HDAC6-226ENST00000483656 SSH1Q8WYL5 1049 aa13.05□□□□□ -0.32
HDAC6-226ENST00000483656 BABAM1Q9NWV8 329 aa13.05□□□□□ -0.32
HDAC6-226ENST00000483656 TSPYL4Q9UJ04 414 aa13.05□□□□□ -0.32
HDAC6-226ENST00000483656 PARP4Q9UKK3 1724 aaKnown RBP13.05□□□□□ -0.32
HDAC6-226ENST00000483656 DISP2A7MBM2 1401 aa13.05□□□□□ -0.32
HDAC6-226ENST00000483656 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-226ENST00000483656 LRP6O75581 1613 aa13.04□□□□□ -0.32
HDAC6-226ENST00000483656 ELL2O00472 640 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-226ENST00000483656 IFNL2Q8IZJ0 200 aa13.04□□□□□ -0.32
HDAC6-226ENST00000483656 ZCRB1Q8TBF4 217 aaKnown RBP13.04□□□□□ -0.32
HDAC6-226ENST00000483656 BCL2L13Q9BXK5 485 aa13.04□□□□□ -0.32
HDAC6-226ENST00000483656 TWISTNBQ3B726 338 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-226ENST00000483656 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
HDAC6-226ENST00000483656 SPATA31A6Q5VVP1 1343 aa13.03□□□□□ -0.32
HDAC6-226ENST00000483656 SHANK3Q9BYB0 1731 aa13.02□□□□□ -0.32
HDAC6-226ENST00000483656 NWD2Q9ULI1 1742 aa13.02□□□□□ -0.32
HDAC6-226ENST00000483656 ALDH1L2Q3SY69 923 aa13.02□□□□□ -0.33
HDAC6-226ENST00000483656 ZNF428Q96B54 188 aa13.02□□□□□ -0.33
HDAC6-226ENST00000483656 TNNQ9UQP3 1299 aa13.02□□□□□ -0.33
HDAC6-226ENST00000483656 VIRMAQ69YN4 1812 aaKnown RBP13.02□□□□□ -0.33
HDAC6-226ENST00000483656 KCNQ3O43525 872 aa13.01□□□□□ -0.33
HDAC6-226ENST00000483656 TEFQ10587 303 aa13.01□□□□□ -0.33
HDAC6-226ENST00000483656 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-226ENST00000483656 MRPL50Q8N5N7 158 aaKnown RBP13.01□□□□□ -0.33
HDAC6-226ENST00000483656 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-226ENST00000483656 EXOC6Q8TAG9 804 aa13.01□□□□□ -0.33
HDAC6-226ENST00000483656 CRBNQ96SW2 442 aa13.01□□□□□ -0.33
HDAC6-226ENST00000483656 SMC4Q9NTJ3 1288 aa13.01□□□□□ -0.33
HDAC6-226ENST00000483656 SPATA31A1Q5TZJ5 1347 aa13.01□□□□□ -0.33
HDAC6-226ENST00000483656 SIPA1L3O60292 1781 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-226ENST00000483656 SCN11AQ9UI33 1791 aa13.01□□□□□ -0.33
HDAC6-226ENST00000483656 KDM3BQ7LBC6 1761 aa13□□□□□ -0.33
HDAC6-226ENST00000483656 BCL9LQ86UU0 1499 aa13□□□□□ -0.33
HDAC6-226ENST00000483656 SPATA31A5Q5VU36 1347 aa13□□□□□ -0.33
HDAC6-226ENST00000483656 SPATA31A7Q8IWB4 1347 aa13□□□□□ -0.33
HDAC6-226ENST00000483656 PCDH11XQ9BZA7 1347 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms