RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 CC2D1BQ5T0F9 858 aaKnown RBP13.14□□□□□ -0.31
HMG20B-210ENST00000483417 EMILIN1Q9Y6C2 1016 aa13.14□□□□□ -0.31
HMG20B-210ENST00000483417 NHSQ6T4R5 1651 aa13.14□□□□□ -0.31
HMG20B-210ENST00000483417 FLT4P35916 1363 aa13.13□□□□□ -0.31
HMG20B-210ENST00000483417 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
HMG20B-210ENST00000483417 ZCRB1Q8TBF4 217 aaKnown RBP13.13□□□□□ -0.31
HMG20B-210ENST00000483417 MEGF6O75095 1541 aa13.13□□□□□ -0.31
HMG20B-210ENST00000483417 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
HMG20B-210ENST00000483417 PDGFDQ9GZP0 370 aaPredicted RBP13.12□□□□□ -0.31
HMG20B-210ENST00000483417 POLKQ9UBT6 870 aa13.12□□□□□ -0.31
HMG20B-210ENST00000483417 USHBP1Q8N6Y0 703 aa13.11□□□□□ -0.31
HMG20B-210ENST00000483417 PRIM1P49642 420 aaKnown RBP13.1□□□□□ -0.31
HMG20B-210ENST00000483417 SLC15A2Q16348 729 aa13.1□□□□□ -0.31
HMG20B-210ENST00000483417 LRRC4BQ9NT99 713 aa13.1□□□□□ -0.31
HMG20B-210ENST00000483417 NCAPD2Q15021 1401 aa13.1□□□□□ -0.31
HMG20B-210ENST00000483417 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
HMG20B-210ENST00000483417 MORC1Q86VD1 984 aa13.09□□□□□ -0.31
HMG20B-210ENST00000483417 BTAF1O14981 1849 aa13.09□□□□□ -0.31
HMG20B-210ENST00000483417 NSD2O96028 1365 aa13.08□□□□□ -0.31
HMG20B-210ENST00000483417 ANKRD26Q9UPS8 1709 aa13.08□□□□□ -0.32
HMG20B-210ENST00000483417 SMG6Q86US8 1419 aaKnown RBP13.08□□□□□ -0.32
HMG20B-210ENST00000483417 TATP17735 454 aaPredicted RBP13.08□□□□□ -0.32
HMG20B-210ENST00000483417 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.32
HMG20B-210ENST00000483417 SPON1Q9HCB6 807 aa13.08□□□□□ -0.32
HMG20B-210ENST00000483417 CASZ1Q86V15 1759 aa13.07□□□□□ -0.32
HMG20B-210ENST00000483417 PPM1GO15355 546 aaPredicted RBP13.07□□□□□ -0.32
HMG20B-210ENST00000483417 EYA1Q99502 592 aa13.07□□□□□ -0.32
HMG20B-210ENST00000483417 STK32BQ9NY57 414 aa13.07□□□□□ -0.32
HMG20B-210ENST00000483417 MAP2P11137 1827 aaKnown RBP13.06□□□□□ -0.32
HMG20B-210ENST00000483417 CYP27B1O15528 508 aa13.06□□□□□ -0.32
HMG20B-210ENST00000483417 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
HMG20B-210ENST00000483417 PTGER2P43116 358 aa13.05□□□□□ -0.32
HMG20B-210ENST00000483417 SLC27A3Q5K4L6 730 aa13.05□□□□□ -0.32
HMG20B-210ENST00000483417 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
HMG20B-210ENST00000483417 EIF4A2Q14240 407 aaKnown RBP13.04□□□□□ -0.32
HMG20B-210ENST00000483417 NKX1-1Q15270 411 aaPredicted RBP13.04□□□□□ -0.32
HMG20B-210ENST00000483417 ZNF827Q17R98 1081 aa13.04□□□□□ -0.32
HMG20B-210ENST00000483417 SYTL4Q96C24 671 aaPredicted RBP13.04□□□□□ -0.32
HMG20B-210ENST00000483417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■■□□□ 11.9
HMG20B-210ENST00000483417 ZBTB7AO95365 584 aa13.03□□□□□ -0.32
HMG20B-210ENST00000483417 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
HMG20B-210ENST00000483417 PCDH11XQ9BZA7 1347 aa13.03□□□□□ -0.32
HMG20B-210ENST00000483417 PCDH11YQ9BZA8 1340 aa13.03□□□□□ -0.32
HMG20B-210ENST00000483417 DOT1LQ8TEK3 1739 aa13.02□□□□□ -0.32
HMG20B-210ENST00000483417 MTHFSP49914 203 aa13.02□□□□□ -0.33
HMG20B-210ENST00000483417 KCNQ4P56696 695 aa13.02□□□□□ -0.33
HMG20B-210ENST00000483417 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
HMG20B-210ENST00000483417 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
HMG20B-210ENST00000483417 PPP2R1AP30153 589 aa13.01□□□□□ -0.33
HMG20B-210ENST00000483417 MTFR1LQ9H019 292 aa13.01□□□□□ -0.33
HMG20B-210ENST00000483417 LY75O60449 1722 aa13.01□□□□□ -0.33
HMG20B-210ENST00000483417 PKD1L3Q7Z443 1732 aa13.01□□□□□ -0.33
HMG20B-210ENST00000483417 KAT6BQ8WYB5 2073 aa13.01□□□□□ -0.33
HMG20B-210ENST00000483417 IGSF1Q8N6C5 1336 aa13□□□□□ -0.33
HMG20B-210ENST00000483417 SPG7Q9UQ90 795 aa13□□□□□ -0.33
HMG20B-210ENST00000483417 PLEKHG2Q9H7P9 1386 aa12.98□□□□□ -0.33
HMG20B-210ENST00000483417 PNPLA7Q6ZV29 1317 aa12.98□□□□□ -0.33
HMG20B-210ENST00000483417 PHKG2P15735 406 aa12.98□□□□□ -0.33
HMG20B-210ENST00000483417 CCDC184Q52MB2 194 aa12.98□□□□□ -0.33
HMG20B-210ENST00000483417 MPRIPQ6WCQ1 1025 aa12.98□□□□□ -0.33
HMG20B-210ENST00000483417 PIGBQ92521 554 aa12.98□□□□□ -0.33
HMG20B-210ENST00000483417 PRKRIP1Q9H875 184 aaPredicted RBP12.98□□□□□ -0.33
HMG20B-210ENST00000483417 PPP1R1BQ9UD71 204 aaPredicted RBP12.98□□□□□ -0.33
HMG20B-210ENST00000483417 CCNL1Q9UK58 526 aaPredicted RBP12.98□□□□□ -0.33
HMG20B-210ENST00000483417 TOGARAM1Q9Y4F4 1720 aa12.97□□□□□ -0.33
HMG20B-210ENST00000483417 IFNL2Q8IZJ0 200 aa12.97□□□□□ -0.33
HMG20B-210ENST00000483417 SLC16A10Q8TF71 515 aa12.97□□□□□ -0.33
HMG20B-210ENST00000483417 IL13P35225 146 aa12.96□□□□□ -0.33
HMG20B-210ENST00000483417 QSER1Q2KHR3 1735 aa12.96□□□□□ -0.34
HMG20B-210ENST00000483417 ITGB4P16144 1822 aa12.95□□□□□ -0.34
HMG20B-210ENST00000483417 RALBP1Q15311 655 aa12.95□□□□□ -0.34
HMG20B-210ENST00000483417 AEBP1Q8IUX7 1158 aa12.95□□□□□ -0.34
HMG20B-210ENST00000483417 TFCP2L1Q9NZI6 479 aa12.95□□□□□ -0.34
HMG20B-210ENST00000483417 PALLDQ8WX93 1383 aa12.94□□□□□ -0.34
HMG20B-210ENST00000483417 COL24A1Q17RW2 1714 aa12.94□□□□□ -0.34
HMG20B-210ENST00000483417 COL23A1Q86Y22 540 aaPredicted RBP12.94□□□□□ -0.34
HMG20B-210ENST00000483417 SMARCC1Q92922 1105 aaPredicted RBP12.94□□□□□ -0.34
HMG20B-210ENST00000483417 SYT17Q9BSW7 474 aa12.94□□□□□ -0.34
HMG20B-210ENST00000483417 FHDC1Q9C0D6 1143 aaPredicted RBP12.94□□□□□ -0.34
HMG20B-210ENST00000483417 PLEKHO1Q53GL0 409 aaPredicted RBP12.93□□□□□ -0.34
HMG20B-210ENST00000483417 DIEXFQ68CQ4 756 aaKnown RBP12.93□□□□□ -0.34
HMG20B-210ENST00000483417 ARXQ96QS3 562 aa12.93□□□□□ -0.34
HMG20B-210ENST00000483417 ATG3Q9NT62 314 aa12.93□□□□□ -0.34
HMG20B-210ENST00000483417 ASAP1Q9ULH1 1129 aa12.93□□□□□ -0.34
HMG20B-210ENST00000483417 KDRP35968 1356 aa12.93□□□□□ -0.34
HMG20B-210ENST00000483417 AMOTQ4VCS5 1084 aa12.92□□□□□ -0.34
HMG20B-210ENST00000483417 SULT6B1Q6IMI4 303 aa12.92□□□□□ -0.34
HMG20B-210ENST00000483417 TUBGCP6Q96RT7 1819 aa12.92□□□□□ -0.34
HMG20B-210ENST00000483417 ERVV-2B6SEH9 535 aa12.91□□□□□ -0.34
HMG20B-210ENST00000483417 ANP32CO43423 234 aa12.91□□□□□ -0.34
HMG20B-210ENST00000483417 HMGB2P26583 209 aaKnown RBP12.91□□□□□ -0.34
HMG20B-210ENST00000483417 AMIGO3Q86WK7 504 aa12.91□□□□□ -0.34
HMG20B-210ENST00000483417 DCAF5Q96JK2 942 aa12.91□□□□□ -0.34
HMG20B-210ENST00000483417 TMOD3Q9NYL9 352 aa12.91□□□□□ -0.34
HMG20B-210ENST00000483417 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
HMG20B-210ENST00000483417 LOC102724428A0A0B4J2F2 783 aa12.9□□□□□ -0.34
HMG20B-210ENST00000483417 SIK1P57059 783 aa12.9□□□□□ -0.34
HMG20B-210ENST00000483417 ITPK1Q13572 414 aa12.9□□□□□ -0.34
HMG20B-210ENST00000483417 MIER1Q8N108 512 aa12.9□□□□□ -0.34
HMG20B-210ENST00000483417 TAF1LQ8IZX4 1826 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms