RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 ZCRB1Q8TBF4 217 aaKnown RBP18.16■□□□□ 0.5
SSR1-208ENST00000483409 BCL9O00512 1426 aa18.15■□□□□ 0.5
SSR1-208ENST00000483409 DDX10Q13206 875 aaKnown RBP18.15■□□□□ 0.5
SSR1-208ENST00000483409 DOT1LQ8TEK3 1739 aa18.15■□□□□ 0.5
SSR1-208ENST00000483409 EN1Q05925 392 aaPredicted RBP18.14■□□□□ 0.49
SSR1-208ENST00000483409 IGSF1Q8N6C5 1336 aa18.14■□□□□ 0.49
SSR1-208ENST00000483409 APBA3O96018 575 aa18.13■□□□□ 0.49
SSR1-208ENST00000483409 PTF1AQ7RTS3 328 aa18.13■□□□□ 0.49
SSR1-208ENST00000483409 BTAF1O14981 1849 aa18.12■□□□□ 0.49
SSR1-208ENST00000483409 ACSBG1Q96GR2 724 aa18.12■□□□□ 0.49
SSR1-208ENST00000483409 IL13P35225 146 aa18.11■□□□□ 0.49
SSR1-208ENST00000483409 RREB1Q92766 1687 aa18.1■□□□□ 0.49
SSR1-208ENST00000483409 COL3A1P02461 1466 aaPredicted RBP18.1■□□□□ 0.49
SSR1-208ENST00000483409 KCNQ2O43526 872 aa18.1■□□□□ 0.49
SSR1-208ENST00000483409 BCL11BQ9C0K0 894 aaPredicted RBP18.1■□□□□ 0.49
SSR1-208ENST00000483409 RGPD3A6NKT7 1758 aaPredicted RBP18.09■□□□□ 0.49
SSR1-208ENST00000483409 RGPD4Q7Z3J3 1758 aa18.09■□□□□ 0.49
SSR1-208ENST00000483409 PCDH11XQ9BZA7 1347 aa18.09■□□□□ 0.49
SSR1-208ENST00000483409 PCDH11YQ9BZA8 1340 aa18.09■□□□□ 0.49
SSR1-208ENST00000483409 EZH2Q15910 746 aaKnown RBP18.09■□□□□ 0.49
SSR1-208ENST00000483409 AEBP1Q8IUX7 1158 aa18.09■□□□□ 0.49
SSR1-208ENST00000483409 DIAPH1O60610 1272 aaKnown RBP18.08■□□□□ 0.48
SSR1-208ENST00000483409 PPP2R1AP30153 589 aa18.08■□□□□ 0.48
SSR1-208ENST00000483409 SULT6B1Q6IMI4 303 aa18.08■□□□□ 0.48
SSR1-208ENST00000483409 NUP188Q5SRE5 1749 aa18.08■□□□□ 0.48
SSR1-208ENST00000483409 TOGARAM1Q9Y4F4 1720 aa18.07■□□□□ 0.48
SSR1-208ENST00000483409 CAMKK2Q96RR4 588 aa18.07■□□□□ 0.48
SSR1-208ENST00000483409 ITGB4P16144 1822 aa18.07■□□□□ 0.48
SSR1-208ENST00000483409 PARD3Q8TEW0 1356 aa18.06■□□□□ 0.48
SSR1-208ENST00000483409 CYP27B1O15528 508 aa18.06■□□□□ 0.48
SSR1-208ENST00000483409 SPG7Q9UQ90 795 aa18.06■□□□□ 0.48
SSR1-208ENST00000483409 SYTL4Q96C24 671 aaPredicted RBP18.05■□□□□ 0.48
SSR1-208ENST00000483409 KDRP35968 1356 aa18.04■□□□□ 0.48
SSR1-208ENST00000483409 HMOX1P09601 288 aa18.04■□□□□ 0.48
SSR1-208ENST00000483409 CFAP53Q96M91 514 aa18.04■□□□□ 0.48
SSR1-208ENST00000483409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.04■□□□□ 0.481e-14■■■□□ 15.7
SSR1-208ENST00000483409 U2SURPO15042 1029 aaKnown RBP18.03■□□□□ 0.48
SSR1-208ENST00000483409 PRIM1P49642 420 aaKnown RBP18.03■□□□□ 0.48
SSR1-208ENST00000483409 PLEKHG2Q9H7P9 1386 aa18.03■□□□□ 0.48
SSR1-208ENST00000483409 ZNF316A6NFI3 1004 aaPredicted RBP18.02■□□□□ 0.48
SSR1-208ENST00000483409 PLSCR1O15162 318 aa18.02■□□□□ 0.48
SSR1-208ENST00000483409 VIRMAQ69YN4 1812 aaKnown RBP18.02■□□□□ 0.47
SSR1-208ENST00000483409 PHKG2P15735 406 aa18.01■□□□□ 0.47
SSR1-208ENST00000483409 PLEKHO1Q53GL0 409 aaPredicted RBP18.01■□□□□ 0.47
SSR1-208ENST00000483409 IFNL2Q8IZJ0 200 aa18■□□□□ 0.47
SSR1-208ENST00000483409 LY75O60449 1722 aa17.99■□□□□ 0.47
SSR1-208ENST00000483409 AMOTQ4VCS5 1084 aa17.99■□□□□ 0.47
SSR1-208ENST00000483409 ZNF530Q6P9A1 599 aaPredicted RBP17.99■□□□□ 0.47
SSR1-208ENST00000483409 NKX1-1Q15270 411 aaPredicted RBP17.98■□□□□ 0.47
SSR1-208ENST00000483409 RALBP1Q15311 655 aa17.98■□□□□ 0.47
SSR1-208ENST00000483409 PROM2Q8N271 834 aa17.97■□□□□ 0.47
SSR1-208ENST00000483409 SCN11AQ9UI33 1791 aa17.96■□□□□ 0.47
SSR1-208ENST00000483409 PSDA5PKW4 1024 aaPredicted RBP17.96■□□□□ 0.47
SSR1-208ENST00000483409 TXNRD1Q16881 649 aa17.96■□□□□ 0.47
SSR1-208ENST00000483409 MPRIPQ6WCQ1 1025 aa17.96■□□□□ 0.47
SSR1-208ENST00000483409 NUDCQ9Y266 331 aa17.96■□□□□ 0.47
SSR1-208ENST00000483409 C1orf141Q5JVX7 400 aa17.95■□□□□ 0.46
SSR1-208ENST00000483409 U2AF1L5P0DN76 240 aaPredicted RBP17.94■□□□□ 0.46
SSR1-208ENST00000483409 U2AF1Q01081 240 aaKnown RBP eCLIP17.94■□□□□ 0.46
SSR1-208ENST00000483409 R3HDM1Q15032 1099 aaKnown RBP17.94■□□□□ 0.46
SSR1-208ENST00000483409 KDM6AO15550 1401 aaPredicted RBP17.94■□□□□ 0.46
SSR1-208ENST00000483409 HSP90AB1P08238 724 aaKnown RBP17.93■□□□□ 0.46
SSR1-208ENST00000483409 MYBBP1AQ9BQG0 1328 aaKnown RBP17.93■□□□□ 0.46
SSR1-208ENST00000483409 PAPPAQ13219 1627 aa17.92■□□□□ 0.46
SSR1-208ENST00000483409 MTHFSDQ2M296 383 aaKnown RBP17.92■□□□□ 0.46
SSR1-208ENST00000483409 NBPF14Q5TI25 921 aa17.92■□□□□ 0.46
SSR1-208ENST00000483409 PIGBQ92521 554 aa17.92■□□□□ 0.46
SSR1-208ENST00000483409 DCAF5Q96JK2 942 aa17.92■□□□□ 0.46
SSR1-208ENST00000483409 RSPH6AQ9H0K4 717 aa17.92■□□□□ 0.46
SSR1-208ENST00000483409 ANO8Q9HCE9 1232 aaPredicted RBP17.92■□□□□ 0.46
SSR1-208ENST00000483409 TMOD3Q9NYL9 352 aa17.92■□□□□ 0.46
SSR1-208ENST00000483409 PRKAR2BP31323 418 aa17.91■□□□□ 0.46
SSR1-208ENST00000483409 PRKRIP1Q9H875 184 aaPredicted RBP17.91■□□□□ 0.46
SSR1-208ENST00000483409 KCNQ4P56696 695 aa17.9■□□□□ 0.46
SSR1-208ENST00000483409 AKAP4Q5JQC9 854 aa17.9■□□□□ 0.46
SSR1-208ENST00000483409 LRRC4BQ9NT99 713 aa17.9■□□□□ 0.46
SSR1-208ENST00000483409 TAF1LQ8IZX4 1826 aa17.9■□□□□ 0.46
SSR1-208ENST00000483409 PALLDQ8WX93 1383 aa17.9■□□□□ 0.46
SSR1-208ENST00000483409 C5P01031 1676 aa17.89■□□□□ 0.45
SSR1-208ENST00000483409 ERVV-2B6SEH9 535 aa17.88■□□□□ 0.45
SSR1-208ENST00000483409 SLC27A3Q5K4L6 730 aa17.88■□□□□ 0.45
SSR1-208ENST00000483409 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
SSR1-208ENST00000483409 TUBGCP6Q96RT7 1819 aa17.88■□□□□ 0.45
SSR1-208ENST00000483409 ADAMTS7Q9UKP4 1686 aa17.87■□□□□ 0.45
SSR1-208ENST00000483409 FCHSD2O94868 740 aa17.87■□□□□ 0.45
SSR1-208ENST00000483409 CABP4P57796 275 aa17.87■□□□□ 0.45
SSR1-208ENST00000483409 CCNL1Q9UK58 526 aaPredicted RBP17.87■□□□□ 0.45
SSR1-208ENST00000483409 ASAP1Q9ULH1 1129 aa17.87■□□□□ 0.45
SSR1-208ENST00000483409 DLG5Q8TDM6 1919 aa17.87■□□□□ 0.45
SSR1-208ENST00000483409 GAS2L2Q8NHY3 880 aa17.86■□□□□ 0.45
SSR1-208ENST00000483409 SMARCC1Q92922 1105 aaPredicted RBP17.86■□□□□ 0.45
SSR1-208ENST00000483409 STK32BQ9NY57 414 aa17.86■□□□□ 0.45
SSR1-208ENST00000483409 CASZ1Q86V15 1759 aa17.85■□□□□ 0.45
SSR1-208ENST00000483409 MAP3K5Q99683 1374 aa17.85■□□□□ 0.45
SSR1-208ENST00000483409 LGR6Q9HBX8 967 aa17.85■□□□□ 0.45
SSR1-208ENST00000483409 MRC1P22897 1456 aa17.84■□□□□ 0.45
SSR1-208ENST00000483409 RNMTO43148 476 aaKnown RBP17.84■□□□□ 0.45
SSR1-208ENST00000483409 SLC15A2Q16348 729 aa17.84■□□□□ 0.45
SSR1-208ENST00000483409 NFATC2IPQ8NCF5 419 aa17.84■□□□□ 0.45
SSR1-208ENST00000483409 ATG3Q9NT62 314 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms