RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 G2E3Q7L622 706 aa15.42■□□□□ 0.06
VPS52-218ENST00000482399 ARHGAP45Q92619 1136 aa15.42■□□□□ 0.06
VPS52-218ENST00000482399 NPATQ14207 1427 aa15.42■□□□□ 0.06
VPS52-218ENST00000482399 TTC12Q9H892 705 aaPredicted RBP15.42■□□□□ 0.06
VPS52-218ENST00000482399 MBD3O95983 291 aa15.41■□□□□ 0.06
VPS52-218ENST00000482399 AMPHP49418 695 aa15.41■□□□□ 0.06
VPS52-218ENST00000482399 ZMYM3Q14202 1370 aa15.41■□□□□ 0.06
VPS52-218ENST00000482399 ATP7AQ04656 1500 aa15.41■□□□□ 0.06
VPS52-218ENST00000482399 DDIT3P35638 169 aa15.41■□□□□ 0.06
VPS52-218ENST00000482399 JARID2Q92833 1246 aaPredicted RBP15.41■□□□□ 0.06
VPS52-218ENST00000482399 IQGAP1P46940 1657 aa15.41■□□□□ 0.06
VPS52-218ENST00000482399 SURF6O75683 361 aaKnown RBP15.4■□□□□ 0.06
VPS52-218ENST00000482399 LRSAM1Q6UWE0 723 aa15.4■□□□□ 0.06
VPS52-218ENST00000482399 PDE1AP54750 535 aa15.4■□□□□ 0.06
VPS52-218ENST00000482399 PPP1R9BQ96SB3 815 aa15.4■□□□□ 0.06
VPS52-218ENST00000482399 PLXNC1O60486 1568 aa15.4■□□□□ 0.06
VPS52-218ENST00000482399 GOLGA6L4A6NEF3 574 aa15.4■□□□□ 0.06
VPS52-218ENST00000482399 GNAI2P04899 355 aa15.4■□□□□ 0.06
VPS52-218ENST00000482399 HSP90AB2PQ58FF8 381 aa15.4■□□□□ 0.06
VPS52-218ENST00000482399 LRRCC1Q9C099 1032 aa15.4■□□□□ 0.06
VPS52-218ENST00000482399 ZKSCAN5Q9Y2L8 839 aa15.4■□□□□ 0.06
VPS52-218ENST00000482399 ABCC1P33527 1531 aa15.4■□□□□ 0.06
VPS52-218ENST00000482399 AK9Q5TCS8 1911 aa15.39■□□□□ 0.05
VPS52-218ENST00000482399 GADD45BO75293 160 aaPredicted RBP15.39■□□□□ 0.05
VPS52-218ENST00000482399 HCLS1P14317 486 aaPredicted RBP15.39■□□□□ 0.05
VPS52-218ENST00000482399 CSPP1Q1MSJ5 1256 aa15.39■□□□□ 0.05
VPS52-218ENST00000482399 PALD1Q9ULE6 856 aa15.39■□□□□ 0.05
VPS52-218ENST00000482399 ABCA6Q8N139 1617 aa15.39■□□□□ 0.05
VPS52-218ENST00000482399 NUDT16Q96DE0 195 aaKnown RBP15.39■□□□□ 0.05
VPS52-218ENST00000482399 IQSEC2Q5JU85 1478 aa15.39■□□□□ 0.05
VPS52-218ENST00000482399 ZHX1Q9UKY1 873 aaPredicted RBP15.38■□□□□ 0.05
VPS52-218ENST00000482399 PHF14O94880 888 aa15.38■□□□□ 0.05
VPS52-218ENST00000482399 ZNF445P59923 1031 aa15.38■□□□□ 0.05
VPS52-218ENST00000482399 SLC52A1Q9NWF4 448 aa15.38■□□□□ 0.05
VPS52-218ENST00000482399 RNF17Q9BXT8 1623 aaKnown RBP15.38■□□□□ 0.05
VPS52-218ENST00000482399 MSH6P52701 1360 aa15.38■□□□□ 0.05
VPS52-218ENST00000482399 MX1P20591 662 aa15.38■□□□□ 0.05
VPS52-218ENST00000482399 CPA1P15085 419 aa15.37■□□□□ 0.05
VPS52-218ENST00000482399 NAP1L2Q9ULW6 460 aaPredicted RBP15.37■□□□□ 0.05
VPS52-218ENST00000482399 NOL7Q9UMY1 257 aaKnown RBP15.37■□□□□ 0.05
VPS52-218ENST00000482399 SMC3Q9UQE7 1217 aa15.37■□□□□ 0.05
VPS52-218ENST00000482399 CWC27Q6UX04 472 aaKnown RBP15.37■□□□□ 0.05
VPS52-218ENST00000482399 FERMT3Q86UX7 667 aa15.37■□□□□ 0.05
VPS52-218ENST00000482399 CCDC9Q9Y3X0 531 aaKnown RBP15.37■□□□□ 0.05
VPS52-218ENST00000482399 ABCC4O15439 1325 aa15.37■□□□□ 0.05
VPS52-218ENST00000482399 MAP3K4Q9Y6R4 1608 aa15.37■□□□□ 0.05
VPS52-218ENST00000482399 IL13P35225 146 aa15.37■□□□□ 0.05
VPS52-218ENST00000482399 CHAF1AQ13111 956 aaPredicted RBP15.36■□□□□ 0.05
VPS52-218ENST00000482399 SPG7Q9UQ90 795 aa15.36■□□□□ 0.05
VPS52-218ENST00000482399 USP48Q86UV5 1035 aa15.36■□□□□ 0.05
VPS52-218ENST00000482399 CNPY2Q9Y2B0 182 aa15.36■□□□□ 0.05
VPS52-218ENST00000482399 LRRFIP2Q9Y608 721 aaKnown RBP15.36■□□□□ 0.05
VPS52-218ENST00000482399 CBX1P83916 185 aa15.35■□□□□ 0.05
VPS52-218ENST00000482399 NGDNQ8NEJ9 315 aaKnown RBP15.35■□□□□ 0.05
VPS52-218ENST00000482399 ZDHHC9Q9Y397 364 aa15.35■□□□□ 0.05
VPS52-218ENST00000482399 SPHKAPQ2M3C7 1700 aa15.35■□□□□ 0.05
VPS52-218ENST00000482399 MYOM1P52179 1685 aa15.35■□□□□ 0.05
VPS52-218ENST00000482399 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.35■□□□□ 0.054e-11■■□□□ 12.7
VPS52-218ENST00000482399 CEP152O94986 1710 aa15.35■□□□□ 0.05
VPS52-218ENST00000482399 ZFYVE16Q7Z3T8 1539 aa15.35■□□□□ 0.05
VPS52-218ENST00000482399 UBTFL1P0CB47 393 aaPredicted RBP15.35■□□□□ 0.05
VPS52-218ENST00000482399 FOSBP53539 338 aa15.35■□□□□ 0.05
VPS52-218ENST00000482399 GIMAP6Q6P9H5 292 aa15.35■□□□□ 0.05
VPS52-218ENST00000482399 MYOM2P54296 1465 aa15.34■□□□□ 0.05
VPS52-218ENST00000482399 FBXW7Q969H0 707 aa15.34■□□□□ 0.05
VPS52-218ENST00000482399 ESYT1Q9BSJ8 1104 aa15.34■□□□□ 0.05
VPS52-218ENST00000482399 CAMK4Q16566 473 aa15.33■□□□□ 0.05
VPS52-218ENST00000482399 CCDC61Q9Y6R9 512 aa15.33■□□□□ 0.05
VPS52-218ENST00000482399 ADCY5O95622 1261 aa15.33■□□□□ 0.04
VPS52-218ENST00000482399 EIF4A2Q14240 407 aaKnown RBP15.33■□□□□ 0.04
VPS52-218ENST00000482399 LMOD2Q6P5Q4 547 aa15.33■□□□□ 0.04
VPS52-218ENST00000482399 ZNF592Q92610 1267 aa15.33■□□□□ 0.04
VPS52-218ENST00000482399 DIAPH3Q9NSV4 1193 aa15.33■□□□□ 0.04
VPS52-218ENST00000482399 CCDC83Q8IWF9 413 aa15.33■□□□□ 0.04
VPS52-218ENST00000482399 PNMA6EA0A0J9YXQ4 647 aa15.32■□□□□ 0.04
VPS52-218ENST00000482399 IGSF3O75054 1194 aa15.32■□□□□ 0.04
VPS52-218ENST00000482399 FGD1P98174 961 aa15.32■□□□□ 0.04
VPS52-218ENST00000482399 ANXA1P04083 346 aa15.32■□□□□ 0.04
VPS52-218ENST00000482399 SASS6Q6UVJ0 657 aa15.32■□□□□ 0.04
VPS52-218ENST00000482399 ASXL2Q76L83 1435 aa15.32■□□□□ 0.04
VPS52-218ENST00000482399 WDR33Q9C0J8 1336 aaKnown RBP15.32■□□□□ 0.04
VPS52-218ENST00000482399 SPDYE4A6NLX3 237 aa15.32■□□□□ 0.04
VPS52-218ENST00000482399 WASLO00401 505 aaPredicted RBP15.32■□□□□ 0.04
VPS52-218ENST00000482399 UNC5CLQ8IV45 518 aa15.31■□□□□ 0.04
VPS52-218ENST00000482399 TCEANC2Q96MN5 208 aa15.31■□□□□ 0.04
VPS52-218ENST00000482399 SRGAP3O43295 1099 aa15.31■□□□□ 0.04
VPS52-218ENST00000482399 MCM2P49736 904 aa15.31■□□□□ 0.04
VPS52-218ENST00000482399 CCT4P50991 539 aaKnown RBP15.3■□□□□ 0.04
VPS52-218ENST00000482399 NCOA3Q9Y6Q9 1424 aa15.3■□□□□ 0.04
VPS52-218ENST00000482399 GNAI3P08754 354 aa15.3■□□□□ 0.04
VPS52-218ENST00000482399 STK3Q13188 491 aa15.3■□□□□ 0.04
VPS52-218ENST00000482399 CASTP20810 708 aaKnown RBP15.3■□□□□ 0.04
VPS52-218ENST00000482399 FLIIQ13045 1269 aa15.29■□□□□ 0.04
VPS52-218ENST00000482399 PUS7Q96PZ0 661 aaKnown RBP15.29■□□□□ 0.04
VPS52-218ENST00000482399 YTHDC2Q9H6S0 1430 aaKnown RBP15.29■□□□□ 0.04
VPS52-218ENST00000482399 USHBP1Q8N6Y0 703 aa15.29■□□□□ 0.04
VPS52-218ENST00000482399 MAP7D2Q96T17 732 aa15.29■□□□□ 0.04
VPS52-218ENST00000482399 RIMS2Q9UQ26 1411 aa15.29■□□□□ 0.04
VPS52-218ENST00000482399 RTL1A6NKG5 1358 aa15.29■□□□□ 0.04
VPS52-218ENST00000482399 CHMLP26374 656 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms