RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 NUTM2GQ5VZR2 741 aa13.02□□□□□ -0.33
HLA-B-253ENST00000481849 HS6ST3Q8IZP7 471 aa13.02□□□□□ -0.33
HLA-B-253ENST00000481849 TNS4Q8IZW8 715 aa13.02□□□□□ -0.33
HLA-B-253ENST00000481849 KHSRPQ92945 711 aaKnown RBP eCLIP13.01□□□□□ -0.33
HLA-B-253ENST00000481849 TNKS1BP1Q9C0C2 1729 aaKnown RBP13□□□□□ -0.33
HLA-B-253ENST00000481849 FAM98CQ17RN3 349 aaKnown RBP13□□□□□ -0.33
HLA-B-253ENST00000481849 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
HLA-B-253ENST00000481849 ZNF687Q8N1G0 1237 aa13□□□□□ -0.33
HLA-B-253ENST00000481849 PRDM11Q9NQV5 511 aa13□□□□□ -0.33
HLA-B-253ENST00000481849 ATP7BP35670 1465 aa12.99□□□□□ -0.33
HLA-B-253ENST00000481849 PLCH1Q4KWH8 1693 aa12.99□□□□□ -0.33
HLA-B-253ENST00000481849 ACEP12821 1306 aa12.98□□□□□ -0.33
HLA-B-253ENST00000481849 SRPK2P78362 688 aaKnown RBP12.98□□□□□ -0.33
HLA-B-253ENST00000481849 CHRNA2Q15822 529 aa12.98□□□□□ -0.33
HLA-B-253ENST00000481849 ABCA3Q99758 1704 aa12.98□□□□□ -0.33
HLA-B-253ENST00000481849 TRPM3Q9HCF6 1732 aaPredicted RBP12.98□□□□□ -0.33
HLA-B-253ENST00000481849 ONECUT3O60422 494 aaPredicted RBP12.97□□□□□ -0.33
HLA-B-253ENST00000481849 ZC3H6P61129 1189 aaKnown RBP12.97□□□□□ -0.33
HLA-B-253ENST00000481849 FAM182BQ5T319 152 aa12.97□□□□□ -0.33
HLA-B-253ENST00000481849 STRN4Q9NRL3 753 aa12.97□□□□□ -0.33
HLA-B-253ENST00000481849 ARHGEF28Q8N1W1 1705 aaKnown RBP12.96□□□□□ -0.33
HLA-B-253ENST00000481849 KIAA0232Q92628 1395 aa12.96□□□□□ -0.33
HLA-B-253ENST00000481849 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.33
HLA-B-253ENST00000481849 NBPF8Q3BBV2 869 aa12.96□□□□□ -0.33
HLA-B-253ENST00000481849 SIN3AQ96ST3 1273 aa12.96□□□□□ -0.33
HLA-B-253ENST00000481849 CENPJQ9HC77 1338 aaPredicted RBP12.95□□□□□ -0.34
HLA-B-253ENST00000481849 HSPA6P17066 643 aa12.95□□□□□ -0.34
HLA-B-253ENST00000481849 NEUROD1Q13562 356 aa12.95□□□□□ -0.34
HLA-B-253ENST00000481849 L3MBTL2Q969R5 705 aa12.95□□□□□ -0.34
HLA-B-253ENST00000481849 ALS2Q96Q42 1657 aa12.95□□□□□ -0.34
HLA-B-253ENST00000481849 SPATA31A5Q5VU36 1347 aa12.94□□□□□ -0.34
HLA-B-253ENST00000481849 SPATA31A7Q8IWB4 1347 aa12.94□□□□□ -0.34
HLA-B-253ENST00000481849 PLEKHG3A1L390 1219 aa12.94□□□□□ -0.34
HLA-B-253ENST00000481849 ABTB2Q8N961 1025 aa12.94□□□□□ -0.34
HLA-B-253ENST00000481849 USP35Q9P2H5 1018 aa12.94□□□□□ -0.34
HLA-B-253ENST00000481849 PPP1R1BQ9UD71 204 aaPredicted RBP12.94□□□□□ -0.34
HLA-B-253ENST00000481849 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
HLA-B-253ENST00000481849 NWD2Q9ULI1 1742 aa12.93□□□□□ -0.34
HLA-B-253ENST00000481849 NUDT7P0C024 238 aa12.93□□□□□ -0.34
HLA-B-253ENST00000481849 COL14A1Q05707 1796 aaKnown RBP12.93□□□□□ -0.34
HLA-B-253ENST00000481849 BRWD3Q6RI45 1802 aa12.92□□□□□ -0.34
HLA-B-253ENST00000481849 PCNTO95613 3336 aa12.92□□□□□ -0.34
HLA-B-253ENST00000481849 ZBTB7CA1YPR0 619 aa12.92□□□□□ -0.34
HLA-B-253ENST00000481849 BAG6P46379 1132 aa12.92□□□□□ -0.34
HLA-B-253ENST00000481849 EVA1CP58658 441 aa12.92□□□□□ -0.34
HLA-B-253ENST00000481849 PPIP5K1Q6PFW1 1433 aa12.92□□□□□ -0.34
HLA-B-253ENST00000481849 NRAPQ86VF7 1730 aa12.92□□□□□ -0.34
HLA-B-253ENST00000481849 PCDHGA4Q9Y5G9 962 aa12.92□□□□□ -0.34
HLA-B-253ENST00000481849 SPATA31A1Q5TZJ5 1347 aa12.9□□□□□ -0.34
HLA-B-253ENST00000481849 CABP1Q9NZU7 370 aa12.9□□□□□ -0.34
HLA-B-253ENST00000481849 ITSN1Q15811 1721 aa12.89□□□□□ -0.35
HLA-B-253ENST00000481849 KIAA1210Q9ULL0 1709 aa12.88□□□□□ -0.35
HLA-B-253ENST00000481849 CRYBG1Q9Y4K1 1723 aa12.88□□□□□ -0.35
HLA-B-253ENST00000481849 EN1Q05925 392 aaPredicted RBP12.88□□□□□ -0.35
HLA-B-253ENST00000481849 LARP1Q6PKG0 1096 aaKnown RBP12.88□□□□□ -0.35
HLA-B-253ENST00000481849 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
HLA-B-253ENST00000481849 RNF166Q96A37 237 aaPredicted RBP12.88□□□□□ -0.35
HLA-B-253ENST00000481849 TOPAZ1Q8N9V7 1692 aa12.87□□□□□ -0.35
HLA-B-253ENST00000481849 ROCK2O75116 1388 aaKnown RBP12.87□□□□□ -0.35
HLA-B-253ENST00000481849 GCP02774 474 aa12.87□□□□□ -0.35
HLA-B-253ENST00000481849 ANKRD13DQ6ZTN6 518 aa12.87□□□□□ -0.35
HLA-B-253ENST00000481849 RYDENQ9NUL5 291 aaKnown RBP12.87□□□□□ -0.35
HLA-B-253ENST00000481849 PHRF1Q9P1Y6 1649 aaKnown RBP12.87□□□□□ -0.35
HLA-B-253ENST00000481849 USP19O94966 1318 aa12.87□□□□□ -0.35
HLA-B-253ENST00000481849 SSH2Q76I76 1423 aa12.86□□□□□ -0.35
HLA-B-253ENST00000481849 EVC2Q86UK5 1308 aa12.86□□□□□ -0.35
HLA-B-253ENST00000481849 TRIM37O94972 964 aa12.85□□□□□ -0.35
HLA-B-253ENST00000481849 PDE3BQ13370 1112 aa12.85□□□□□ -0.35
HLA-B-253ENST00000481849 LHX6Q9UPM6 363 aa12.85□□□□□ -0.35
HLA-B-253ENST00000481849 NRKQ7Z2Y5 1582 aa12.85□□□□□ -0.35
HLA-B-253ENST00000481849 SHANK3Q9BYB0 1731 aa12.85□□□□□ -0.35
HLA-B-253ENST00000481849 CPDO75976 1380 aa12.84□□□□□ -0.35
HLA-B-253ENST00000481849 THSD7AQ9UPZ6 1657 aa12.84□□□□□ -0.35
HLA-B-253ENST00000481849 TCP11L2Q8N4U5 519 aa12.84□□□□□ -0.35
HLA-B-253ENST00000481849 GPHNQ9NQX3 736 aaPredicted RBP12.84□□□□□ -0.35
HLA-B-253ENST00000481849 USP6P35125 1406 aa12.84□□□□□ -0.35
HLA-B-253ENST00000481849 QRICH2Q9H0J4 1663 aa12.83□□□□□ -0.35
HLA-B-253ENST00000481849 FOXK1P85037 733 aa12.83□□□□□ -0.36
HLA-B-253ENST00000481849 EZH2Q15910 746 aaKnown RBP12.83□□□□□ -0.36
HLA-B-253ENST00000481849 FAM196AQ6ZSG2 479 aa12.83□□□□□ -0.36
HLA-B-253ENST00000481849 BARGINQ6ZT62 677 aa12.83□□□□□ -0.36
HLA-B-253ENST00000481849 PLPP6Q8IY26 295 aa12.83□□□□□ -0.36
HLA-B-253ENST00000481849 APBA3O96018 575 aa12.82□□□□□ -0.36
HLA-B-253ENST00000481849 NKX1-1Q15270 411 aaPredicted RBP12.82□□□□□ -0.36
HLA-B-253ENST00000481849 SPON1Q9HCB6 807 aa12.82□□□□□ -0.36
HLA-B-253ENST00000481849 GOLGB1Q14789 3259 aaKnown RBP12.82□□□□□ -0.36
HLA-B-253ENST00000481849 BRD4O60885 1362 aaPredicted RBP12.81□□□□□ -0.36
HLA-B-253ENST00000481849 COL5A2P05997 1499 aaPredicted RBP12.8□□□□□ -0.36
HLA-B-253ENST00000481849 TOM1L2Q6ZVM7 507 aa12.8□□□□□ -0.36
HLA-B-253ENST00000481849 TTC21BQ7Z4L5 1316 aa12.8□□□□□ -0.36
HLA-B-253ENST00000481849 TRPM1Q7Z4N2 1603 aa12.8□□□□□ -0.36
HLA-B-253ENST00000481849 TNS2Q63HR2 1409 aa12.79□□□□□ -0.36
HLA-B-253ENST00000481849 PTGER2P43116 358 aa12.79□□□□□ -0.36
HLA-B-253ENST00000481849 DSG2Q14126 1118 aa12.79□□□□□ -0.36
HLA-B-253ENST00000481849 PTCD2Q8WV60 388 aaKnown RBP12.79□□□□□ -0.36
HLA-B-253ENST00000481849 CAMKK2Q96RR4 588 aa12.79□□□□□ -0.36
HLA-B-253ENST00000481849 CARD11Q9BXL7 1154 aa12.79□□□□□ -0.36
HLA-B-253ENST00000481849 LMO7Q8WWI1 1683 aa12.78□□□□□ -0.36
HLA-B-253ENST00000481849 TBC1D12O60347 775 aa12.78□□□□□ -0.36
HLA-B-253ENST00000481849 PBX2P40425 430 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms