RNA–Protein interactions for RNA: ENST00000481573.1

SEC61B-202, Transcript of Sec61 translocon beta subunit, humanhuman

TSL 2

Gene SEC61B, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-202ENST00000481573 GJD4Q96KN9 370 aaPredicted RBP17.61■□□□□ 0.41
SEC61B-202ENST00000481573 QTRT2Q9H974 415 aaKnown RBP17.61■□□□□ 0.41
SEC61B-202ENST00000481573 OVOS2A0A0G2JMS6 1433 aa17.61■□□□□ 0.41
SEC61B-202ENST00000481573 CCDC9Q9Y3X0 531 aaKnown RBP17.6■□□□□ 0.41
SEC61B-202ENST00000481573 FAM9BQ8IZU0 186 aa17.59■□□□□ 0.41
SEC61B-202ENST00000481573 PLEKHF1Q96S99 279 aa17.59■□□□□ 0.41
SEC61B-202ENST00000481573 THRAP3Q9Y2W1 955 aaKnown RBP17.59■□□□□ 0.41
SEC61B-202ENST00000481573 FCHSD2O94868 740 aa17.58■□□□□ 0.4
SEC61B-202ENST00000481573 PRKAR2BP31323 418 aa17.58■□□□□ 0.4
SEC61B-202ENST00000481573 BARGINQ6ZT62 677 aa17.58■□□□□ 0.4
SEC61B-202ENST00000481573 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.4
SEC61B-202ENST00000481573 IL2RBP14784 551 aa17.57■□□□□ 0.4
SEC61B-202ENST00000481573 FAM98CQ17RN3 349 aaKnown RBP17.57■□□□□ 0.4
SEC61B-202ENST00000481573 CCDC146Q8IYE0 955 aa17.57■□□□□ 0.4
SEC61B-202ENST00000481573 TOGARAM1Q9Y4F4 1720 aa17.56■□□□□ 0.4
SEC61B-202ENST00000481573 ADAMTS7Q9UKP4 1686 aa17.56■□□□□ 0.4
SEC61B-202ENST00000481573 PHACTR3Q96KR7 559 aa17.56■□□□□ 0.4
SEC61B-202ENST00000481573 TNS2Q63HR2 1409 aa17.55■□□□□ 0.4
SEC61B-202ENST00000481573 PLEKHG2Q9H7P9 1386 aa17.55■□□□□ 0.4
SEC61B-202ENST00000481573 RAPGEF4Q8WZA2 1011 aa17.55■□□□□ 0.4
SEC61B-202ENST00000481573 SBF2Q86WG5 1849 aa17.55■□□□□ 0.4
SEC61B-202ENST00000481573 ITGB4P16144 1822 aa17.54■□□□□ 0.4
SEC61B-202ENST00000481573 ONECUT3O60422 494 aaPredicted RBP17.54■□□□□ 0.4
SEC61B-202ENST00000481573 TATP17735 454 aaPredicted RBP17.54■□□□□ 0.4
SEC61B-202ENST00000481573 RBM6P78332 1123 aaKnown RBP17.54■□□□□ 0.4
SEC61B-202ENST00000481573 DOT1LQ8TEK3 1739 aa17.54■□□□□ 0.4
SEC61B-202ENST00000481573 SIPA1L3O60292 1781 aaPredicted RBP17.53■□□□□ 0.4
SEC61B-202ENST00000481573 RUNDC1Q96C34 613 aa17.53■□□□□ 0.4
SEC61B-202ENST00000481573 RGS12O14924 1447 aa17.53■□□□□ 0.4
SEC61B-202ENST00000481573 KAT6BQ8WYB5 2073 aa17.52■□□□□ 0.4
SEC61B-202ENST00000481573 RXRBP28702 533 aa17.52■□□□□ 0.4
SEC61B-202ENST00000481573 MTHFSDQ2M296 383 aaKnown RBP17.51■□□□□ 0.39
SEC61B-202ENST00000481573 CDCA7Q9BWT1 371 aaPredicted RBP17.51■□□□□ 0.39
SEC61B-202ENST00000481573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.5■□□□□ 0.39
SEC61B-202ENST00000481573 MAPK8IP3Q9UPT6 1336 aa17.49■□□□□ 0.39
SEC61B-202ENST00000481573 SENP3-EIF4A1A0A087X0R7 540 aa17.49■□□□□ 0.39
SEC61B-202ENST00000481573 PLEKHO1Q53GL0 409 aaPredicted RBP17.49■□□□□ 0.39
SEC61B-202ENST00000481573 SEPT12Q8IYM1 358 aa17.49■□□□□ 0.39
SEC61B-202ENST00000481573 ZCRB1Q8TBF4 217 aaKnown RBP17.49■□□□□ 0.39
SEC61B-202ENST00000481573 PNNQ9H307 717 aaKnown RBP17.49■□□□□ 0.39
SEC61B-202ENST00000481573 CYP27B1O15528 508 aa17.48■□□□□ 0.39
SEC61B-202ENST00000481573 DDB1Q16531 1140 aa17.48■□□□□ 0.39
SEC61B-202ENST00000481573 AMOTQ4VCS5 1084 aa17.48■□□□□ 0.39
SEC61B-202ENST00000481573 APAF1O14727 1248 aa17.47■□□□□ 0.39
SEC61B-202ENST00000481573 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
SEC61B-202ENST00000481573 ZNF530Q6P9A1 599 aaPredicted RBP17.47■□□□□ 0.39
SEC61B-202ENST00000481573 SPG7Q9UQ90 795 aa17.47■□□□□ 0.39
SEC61B-202ENST00000481573 PCDH11XQ9BZA7 1347 aa17.47■□□□□ 0.39
SEC61B-202ENST00000481573 PCDH11YQ9BZA8 1340 aa17.47■□□□□ 0.39
SEC61B-202ENST00000481573 EXOC5O00471 708 aa17.46■□□□□ 0.39
SEC61B-202ENST00000481573 TMPOP42166 694 aaKnown RBP17.46■□□□□ 0.39
SEC61B-202ENST00000481573 GAS2L2Q8NHY3 880 aa17.46■□□□□ 0.39
SEC61B-202ENST00000481573 RRP7AQ9Y3A4 280 aaKnown RBP17.46■□□□□ 0.39
SEC61B-202ENST00000481573 KDM6AO15550 1401 aaPredicted RBP17.46■□□□□ 0.39
SEC61B-202ENST00000481573 NHSQ6T4R5 1651 aa17.45■□□□□ 0.38
SEC61B-202ENST00000481573 MAP3K5Q99683 1374 aa17.45■□□□□ 0.38
SEC61B-202ENST00000481573 A0A0G2JS52 829 aa17.45■□□□□ 0.38
SEC61B-202ENST00000481573 PHKG2P15735 406 aa17.45■□□□□ 0.38
SEC61B-202ENST00000481573 MYT1Q01538 1121 aa17.45■□□□□ 0.38
SEC61B-202ENST00000481573 MARCH10Q8NA82 808 aaPredicted RBP17.45■□□□□ 0.38
SEC61B-202ENST00000481573 NEFMP07197 916 aa17.44■□□□□ 0.38
SEC61B-202ENST00000481573 DDX54Q8TDD1 881 aaKnown RBP17.44■□□□□ 0.38
SEC61B-202ENST00000481573 MRC1P22897 1456 aa17.43■□□□□ 0.38
SEC61B-202ENST00000481573 BTAF1O14981 1849 aa17.42■□□□□ 0.38
SEC61B-202ENST00000481573 NKX1-1Q15270 411 aaPredicted RBP17.42■□□□□ 0.38
SEC61B-202ENST00000481573 AKAP4Q5JQC9 854 aa17.42■□□□□ 0.38
SEC61B-202ENST00000481573 IFNL2Q8IZJ0 200 aa17.42■□□□□ 0.38
SEC61B-202ENST00000481573 TRIM35Q9UPQ4 493 aa17.42■□□□□ 0.38
SEC61B-202ENST00000481573 KDM3BQ7LBC6 1761 aa17.42■□□□□ 0.38
SEC61B-202ENST00000481573 PAPPAQ13219 1627 aa17.42■□□□□ 0.38
SEC61B-202ENST00000481573 RIPK4P57078 832 aa17.41■□□□□ 0.38
SEC61B-202ENST00000481573 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
SEC61B-202ENST00000481573 TNS1Q9HBL0 1735 aaKnown RBP17.41■□□□□ 0.38
SEC61B-202ENST00000481573 GNAT3A8MTJ3 354 aa17.4■□□□□ 0.38
SEC61B-202ENST00000481573 PDE3BQ13370 1112 aa17.4■□□□□ 0.38
SEC61B-202ENST00000481573 C1orf141Q5JVX7 400 aa17.4■□□□□ 0.38
SEC61B-202ENST00000481573 FAM182BQ5T319 152 aa17.4■□□□□ 0.38
SEC61B-202ENST00000481573 CEMIPQ8WUJ3 1361 aa17.4■□□□□ 0.38
SEC61B-202ENST00000481573 BCL9O00512 1426 aa17.39■□□□□ 0.38
SEC61B-202ENST00000481573 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.37
SEC61B-202ENST00000481573 DCTN1Q14203 1278 aa17.39■□□□□ 0.37
SEC61B-202ENST00000481573 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.37
SEC61B-202ENST00000481573 KRT27Q7Z3Y8 459 aa17.39■□□□□ 0.37
SEC61B-202ENST00000481573 IL17REQ8NFR9 667 aa17.39■□□□□ 0.37
SEC61B-202ENST00000481573 LGR6Q9HBX8 967 aa17.39■□□□□ 0.37
SEC61B-202ENST00000481573 MCM10Q7L590 875 aa17.38■□□□□ 0.37
SEC61B-202ENST00000481573 THUMPD2Q9BTF0 503 aaKnown RBP17.38■□□□□ 0.37
SEC61B-202ENST00000481573 SALL2Q9Y467 1007 aaPredicted RBP17.38■□□□□ 0.37
SEC61B-202ENST00000481573 RNMTO43148 476 aaKnown RBP17.37■□□□□ 0.37
SEC61B-202ENST00000481573 HTATSF1O43719 755 aaKnown RBP17.37■□□□□ 0.37
SEC61B-202ENST00000481573 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
SEC61B-202ENST00000481573 ZNF521Q96K83 1311 aa17.37■□□□□ 0.37
SEC61B-202ENST00000481573 EP400Q96L91 3159 aa17.37■□□□□ 0.37
SEC61B-202ENST00000481573 HSP90AB1P08238 724 aaKnown RBP17.36■□□□□ 0.37
SEC61B-202ENST00000481573 HNRNPUQ00839 825 aaKnown RBP eCLIP17.36■□□□□ 0.37
SEC61B-202ENST00000481573 CCDC27Q2M243 656 aa17.36■□□□□ 0.37
SEC61B-202ENST00000481573 DCAF5Q96JK2 942 aa17.36■□□□□ 0.37
SEC61B-202ENST00000481573 WWC1Q8IX03 1113 aa17.35■□□□□ 0.37
SEC61B-202ENST00000481573 LY75O60449 1722 aa17.34■□□□□ 0.37
SEC61B-202ENST00000481573 LMOD3Q0VAK6 560 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms