RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 FMNL2Q96PY5 1086 aa8.43□□□□□ -1.06
COPA-204ENST00000481522 SLC24A3Q9HC58 644 aa8.43□□□□□ -1.06
COPA-204ENST00000481522 TXKP42681 527 aa8.42□□□□□ -1.06
COPA-204ENST00000481522 GATA4P43694 442 aa8.42□□□□□ -1.06
COPA-204ENST00000481522 TTLL12Q14166 644 aaPredicted RBP8.42□□□□□ -1.06
COPA-204ENST00000481522 FOXR1Q6PIV2 292 aa8.42□□□□□ -1.06
COPA-204ENST00000481522 CFAP99D6REC4 459 aa8.41□□□□□ -1.06
COPA-204ENST00000481522 MX2P20592 715 aa8.41□□□□□ -1.06
COPA-204ENST00000481522 VASH1Q7L8A9 365 aaPredicted RBP8.41□□□□□ -1.06
COPA-204ENST00000481522 GTPBP3Q969Y2 492 aaKnown RBP8.41□□□□□ -1.06
COPA-204ENST00000481522 GNB5O14775 395 aa8.4□□□□□ -1.06
COPA-204ENST00000481522 HYAL3O43820 417 aaPredicted RBP8.4□□□□□ -1.06
COPA-204ENST00000481522 RELBQ01201 579 aa8.4□□□□□ -1.06
COPA-204ENST00000481522 DIXDC1Q155Q3 683 aa8.4□□□□□ -1.06
COPA-204ENST00000481522 TPRNQ4KMQ1 711 aa8.4□□□□□ -1.06
COPA-204ENST00000481522 RSBN1LQ6PCB5 846 aaPredicted RBP8.4□□□□□ -1.06
COPA-204ENST00000481522 PGPEP1Q9NXJ5 209 aa8.4□□□□□ -1.06
COPA-204ENST00000481522 AMHR2Q16671 573 aa8.39□□□□□ -1.07
COPA-204ENST00000481522 PRSS36Q5K4E3 855 aa8.39□□□□□ -1.07
COPA-204ENST00000481522 TRMT44Q8IYL2 757 aaKnown RBP8.39□□□□□ -1.07
COPA-204ENST00000481522 BEGAINQ9BUH8 593 aa8.39□□□□□ -1.07
COPA-204ENST00000481522 ZBTB3Q9H5J0 574 aa8.39□□□□□ -1.07
COPA-204ENST00000481522 HRCP23327 699 aa8.38□□□□□ -1.07
COPA-204ENST00000481522 GIGYF2Q6Y7W6 1299 aaKnown RBP8.38□□□□□ -1.07
COPA-204ENST00000481522 TBC1D2Q9BYX2 928 aa8.38□□□□□ -1.07
COPA-204ENST00000481522 NSFL1CQ9UNZ2 370 aaKnown RBP8.38□□□□□ -1.07
COPA-204ENST00000481522 PCDHB15Q9Y5E8 787 aa8.38□□□□□ -1.07
COPA-204ENST00000481522 TRIM66O15016 1216 aa8.37□□□□□ -1.07
COPA-204ENST00000481522 MAP2K3P46734 347 aa8.37□□□□□ -1.07
COPA-204ENST00000481522 TPSG1Q9NRR2 321 aa8.37□□□□□ -1.07
COPA-204ENST00000481522 PAX4O43316 350 aa8.36□□□□□ -1.07
COPA-204ENST00000481522 ARMC2Q8NEN0 867 aa8.36□□□□□ -1.07
COPA-204ENST00000481522 EDARADDQ8WWZ3 215 aa8.36□□□□□ -1.07
COPA-204ENST00000481522 PRPF38BQ5VTL8 546 aaKnown RBP8.35□□□□□ -1.07
COPA-204ENST00000481522 TRERF1Q96PN7 1200 aa8.35□□□□□ -1.07
COPA-204ENST00000481522 PER1O15534 1290 aaPredicted RBP8.34□□□□□ -1.07
COPA-204ENST00000481522 PDE4DQ08499 809 aa8.34□□□□□ -1.07
COPA-204ENST00000481522 LYSMD3Q7Z3D4 306 aa8.34□□□□□ -1.07
COPA-204ENST00000481522 ZNF395Q9H8N7 513 aaPredicted RBP8.34□□□□□ -1.07
COPA-204ENST00000481522 COL17A1Q9UMD9 1497 aaPredicted RBP8.33□□□□□ -1.08
COPA-204ENST00000481522 PIK3R2O00459 728 aa8.33□□□□□ -1.08
COPA-204ENST00000481522 NBPF14Q5TI25 921 aa8.33□□□□□ -1.08
COPA-204ENST00000481522 PARP9Q8IXQ6 854 aa8.33□□□□□ -1.08
COPA-204ENST00000481522 NOP53Q9NZM5 478 aaKnown RBP8.33□□□□□ -1.08
COPA-204ENST00000481522 DGKGP49619 791 aa8.32□□□□□ -1.08
COPA-204ENST00000481522 RIC3Q7Z5B4 369 aa8.32□□□□□ -1.08
COPA-204ENST00000481522 CABLES1Q8TDN4 633 aa8.32□□□□□ -1.08
COPA-204ENST00000481522 KLRG1Q96E93 195 aa8.32□□□□□ -1.08
COPA-204ENST00000481522 MAGEB6P1A0A0J9YX57 407 aa8.31□□□□□ -1.08
COPA-204ENST00000481522 RHOQP17081 205 aa8.31□□□□□ -1.08
COPA-204ENST00000481522 SH3BP5LQ7L8J4 393 aa8.31□□□□□ -1.08
COPA-204ENST00000481522 TSC1Q92574 1164 aa8.31□□□□□ -1.08
COPA-204ENST00000481522 PRKCSHP14314 528 aaPredicted RBP8.3□□□□□ -1.08
COPA-204ENST00000481522 GDF2Q9UK05 429 aaPredicted RBP8.3□□□□□ -1.08
COPA-204ENST00000481522 CSPP1Q1MSJ5 1256 aa8.29□□□□□ -1.08
COPA-204ENST00000481522 RIPOR1Q6ZS17 1223 aa8.29□□□□□ -1.08
COPA-204ENST00000481522 CARD14Q9BXL6 1004 aa8.28□□□□□ -1.08
COPA-204ENST00000481522 NUTM2BA6NNL0 878 aaPredicted RBP8.27□□□□□ -1.09
COPA-204ENST00000481522 NUTM2EB1AL46 878 aaPredicted RBP8.27□□□□□ -1.09
COPA-204ENST00000481522 H7C1W4 665 aa8.27□□□□□ -1.09
COPA-204ENST00000481522 LCE4AQ5TA78 99 aa8.27□□□□□ -1.09
COPA-204ENST00000481522 NUTM2DQ5VT03 806 aaPredicted RBP8.27□□□□□ -1.09
COPA-204ENST00000481522 NUTM2AQ8IVF1 878 aaPredicted RBP8.27□□□□□ -1.09
COPA-204ENST00000481522 AMPD1P23109 780 aa8.26□□□□□ -1.09
COPA-204ENST00000481522 GPKOWQ92917 476 aaPredicted RBP eCLIP8.26□□□□□ -1.09
COPA-204ENST00000481522 ERFEQ4G0M1 354 aa8.25□□□□□ -1.09
COPA-204ENST00000481522 PRICKLE2Q7Z3G6 844 aa8.25□□□□□ -1.09
COPA-204ENST00000481522 GOLGA6L1Q8N7Z2 621 aa8.25□□□□□ -1.09
COPA-204ENST00000481522 KDF1Q8NAX2 398 aaPredicted RBP8.25□□□□□ -1.09
COPA-204ENST00000481522 QPCTQ16769 361 aa8.24□□□□□ -1.09
COPA-204ENST00000481522 HELBQ8NG08 1087 aaPredicted RBP8.24□□□□□ -1.09
COPA-204ENST00000481522 GPBP1L1Q9HC44 474 aaPredicted RBP8.24□□□□□ -1.09
COPA-204ENST00000481522 DHX9Q08211 1270 aaKnown RBP8.23□□□□□ -1.09
COPA-204ENST00000481522 NEUROD2Q15784 382 aa8.23□□□□□ -1.09
COPA-204ENST00000481522 TUSC1Q2TAM9 212 aa8.23□□□□□ -1.09
COPA-204ENST00000481522 SLCO4C1Q6ZQN7 724 aa8.23□□□□□ -1.09
COPA-204ENST00000481522 KDM4CQ9H3R0 1056 aa8.23□□□□□ -1.09
COPA-204ENST00000481522 CDV3Q9UKY7 258 aaKnown RBP8.23□□□□□ -1.09
COPA-204ENST00000481522 DYRK1BQ9Y463 629 aa8.23□□□□□ -1.09
COPA-204ENST00000481522 BTBD6Q96KE9 485 aa8.22□□□□□ -1.09
COPA-204ENST00000481522 KCTD15Q96SI1 283 aaPredicted RBP8.22□□□□□ -1.09
COPA-204ENST00000481522 LIMD1Q9UGP4 676 aa8.22□□□□□ -1.09
COPA-204ENST00000481522 LILRB3O75022 631 aa8.21□□□□□ -1.1
COPA-204ENST00000481522 THBS1P07996 1170 aa8.21□□□□□ -1.1
COPA-204ENST00000481522 SLC10A4Q96EP9 437 aa8.21□□□□□ -1.1
COPA-204ENST00000481522 ADH1AP07327 375 aa8.2□□□□□ -1.1
COPA-204ENST00000481522 MYSM1Q5VVJ2 828 aa8.2□□□□□ -1.1
COPA-204ENST00000481522 CFHR5Q9BXR6 569 aa8.2□□□□□ -1.1
COPA-204ENST00000481522 SPATA31C1P0DKV0 1188 aa8.19□□□□□ -1.1
COPA-204ENST00000481522 PTGIRP43119 386 aa8.19□□□□□ -1.1
COPA-204ENST00000481522 RNF144AP50876 292 aaPredicted RBP8.19□□□□□ -1.1
COPA-204ENST00000481522 DDRGK1Q96HY6 314 aa8.19□□□□□ -1.1
COPA-204ENST00000481522 ARHGAP9Q9BRR9 750 aa8.19□□□□□ -1.1
COPA-204ENST00000481522 PDXDC2PQ6P474 469 aa8.18□□□□□ -1.1
COPA-204ENST00000481522 TRIM11Q96F44 468 aa8.18□□□□□ -1.1
COPA-204ENST00000481522 KRTAP9-8Q9BYQ0 159 aa8.18□□□□□ -1.1
COPA-204ENST00000481522 BRPF1P55201 1214 aaPredicted RBP8.17□□□□□ -1.1
COPA-204ENST00000481522 RTL5Q5HYW3 569 aaPredicted RBP8.17□□□□□ -1.1
COPA-204ENST00000481522 NUCKS1Q9H1E3 243 aaKnown RBP8.17□□□□□ -1.1
COPA-204ENST00000481522 EPXP11678 715 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms