RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
GTF3C2-210ENST00000480989 ARXQ96QS3 562 aa13.2□□□□□ -0.3
GTF3C2-210ENST00000480989 TERF2IPQ9NYB0 399 aa13.2□□□□□ -0.3
GTF3C2-210ENST00000480989 ANKRD36BQ8N2N9 1353 aa13.2□□□□□ -0.3
GTF3C2-210ENST00000480989 KIF20BQ96Q89 1820 aa13.19□□□□□ -0.3
GTF3C2-210ENST00000480989 TAF1LQ8IZX4 1826 aa13.18□□□□□ -0.3
GTF3C2-210ENST00000480989 PRIM1P49642 420 aaKnown RBP13.18□□□□□ -0.3
GTF3C2-210ENST00000480989 RRS1Q15050 365 aaKnown RBP13.18□□□□□ -0.3
GTF3C2-210ENST00000480989 NBPF6Q5VWK0 638 aa13.17□□□□□ -0.3
GTF3C2-210ENST00000480989 USHBP1Q8N6Y0 703 aa13.17□□□□□ -0.3
GTF3C2-210ENST00000480989 NBPF4Q96M43 638 aa13.17□□□□□ -0.3
GTF3C2-210ENST00000480989 C5P01031 1676 aa13.17□□□□□ -0.3
GTF3C2-210ENST00000480989 FYB1O15117 783 aa13.16□□□□□ -0.3
GTF3C2-210ENST00000480989 NLGN2Q8NFZ4 835 aa13.16□□□□□ -0.3
GTF3C2-210ENST00000480989 COG3Q96JB2 828 aa13.16□□□□□ -0.3
GTF3C2-210ENST00000480989 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
GTF3C2-210ENST00000480989 ITGB4P16144 1822 aa13.16□□□□□ -0.3
GTF3C2-210ENST00000480989 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
GTF3C2-210ENST00000480989 GGNBP2Q9H3C7 697 aa13.15□□□□□ -0.3
GTF3C2-210ENST00000480989 PKD1L3Q7Z443 1732 aa13.15□□□□□ -0.3
GTF3C2-210ENST00000480989 ANKRD26Q9UPS8 1709 aa13.15□□□□□ -0.3
GTF3C2-210ENST00000480989 DCAF8L1A6NGE4 600 aa13.14□□□□□ -0.31
GTF3C2-210ENST00000480989 AMPHP49418 695 aa13.14□□□□□ -0.31
GTF3C2-210ENST00000480989 ZCRB1Q8TBF4 217 aaKnown RBP13.14□□□□□ -0.31
GTF3C2-210ENST00000480989 SYTL4Q96C24 671 aaPredicted RBP13.14□□□□□ -0.31
GTF3C2-210ENST00000480989 USP47Q96K76 1375 aa13.13□□□□□ -0.31
GTF3C2-210ENST00000480989 AMIGO3Q86WK7 504 aa13.13□□□□□ -0.31
GTF3C2-210ENST00000480989 MAP2P11137 1827 aaKnown RBP13.13□□□□□ -0.31
GTF3C2-210ENST00000480989 HSP90AB2PQ58FF8 381 aa13.12□□□□□ -0.31
GTF3C2-210ENST00000480989 COL23A1Q86Y22 540 aaPredicted RBP13.12□□□□□ -0.31
GTF3C2-210ENST00000480989 SLC16A10Q8TF71 515 aa13.12□□□□□ -0.31
GTF3C2-210ENST00000480989 NCAPD2Q15021 1401 aa13.12□□□□□ -0.31
GTF3C2-210ENST00000480989 UBR3Q6ZT12 1888 aa13.11□□□□□ -0.31
GTF3C2-210ENST00000480989 CARD14Q9BXL6 1004 aa13.11□□□□□ -0.31
GTF3C2-210ENST00000480989 C4BP0C0L5 1744 aa13.1□□□□□ -0.31
GTF3C2-210ENST00000480989 INSRP06213 1382 aa13.1□□□□□ -0.31
GTF3C2-210ENST00000480989 CYP27B1O15528 508 aa13.1□□□□□ -0.31
GTF3C2-210ENST00000480989 YBX3P16989 372 aaKnown RBP eCLIP13.1□□□□□ -0.313e-7■■■■■ 30
GTF3C2-210ENST00000480989 TFCP2L1Q9NZI6 479 aa13.1□□□□□ -0.31
GTF3C2-210ENST00000480989 CCNL1Q9UK58 526 aaPredicted RBP13.1□□□□□ -0.31
GTF3C2-210ENST00000480989 CEP350Q5VT06 3117 aa13.09□□□□□ -0.31
GTF3C2-210ENST00000480989 SMIM5Q71RC9 77 aa13.09□□□□□ -0.31
GTF3C2-210ENST00000480989 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
GTF3C2-210ENST00000480989 FLT4P35916 1363 aa13.08□□□□□ -0.31
GTF3C2-210ENST00000480989 MSL1Q68DK7 614 aa13.08□□□□□ -0.32
GTF3C2-210ENST00000480989 EMILIN1Q9Y6C2 1016 aa13.08□□□□□ -0.32
GTF3C2-210ENST00000480989 NSD3Q9BZ95 1437 aa13.07□□□□□ -0.32
GTF3C2-210ENST00000480989 GPR162Q16538 588 aa13.07□□□□□ -0.32
GTF3C2-210ENST00000480989 PALLDQ8WX93 1383 aa13.07□□□□□ -0.32
GTF3C2-210ENST00000480989 POLD1P28340 1107 aa13.06□□□□□ -0.32
GTF3C2-210ENST00000480989 C1QTNF8P60827 252 aa13.06□□□□□ -0.32
GTF3C2-210ENST00000480989 TMF1P82094 1093 aa13.06□□□□□ -0.32
GTF3C2-210ENST00000480989 CGNL1Q0VF96 1302 aa13.06□□□□□ -0.32
GTF3C2-210ENST00000480989 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
GTF3C2-210ENST00000480989 TATP17735 454 aaPredicted RBP13.05□□□□□ -0.32
GTF3C2-210ENST00000480989 RAPGEF4Q8WZA2 1011 aa13.05□□□□□ -0.32
GTF3C2-210ENST00000480989 PCDH11XQ9BZA7 1347 aa13.05□□□□□ -0.32
GTF3C2-210ENST00000480989 PCDH11YQ9BZA8 1340 aa13.05□□□□□ -0.32
GTF3C2-210ENST00000480989 KIF24Q5T7B8 1368 aa13.05□□□□□ -0.32
GTF3C2-210ENST00000480989 KIAA1551Q9HCM1 1747 aa13.05□□□□□ -0.32
GTF3C2-210ENST00000480989 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
GTF3C2-210ENST00000480989 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
GTF3C2-210ENST00000480989 PIGBQ92521 554 aa13.03□□□□□ -0.32
GTF3C2-210ENST00000480989 SENP3-EIF4A1A0A087X0R7 540 aa13.02□□□□□ -0.33
GTF3C2-210ENST00000480989 NKX1-1Q15270 411 aaPredicted RBP13.02□□□□□ -0.33
GTF3C2-210ENST00000480989 MSH5O43196 834 aa13.01□□□□□ -0.33
GTF3C2-210ENST00000480989 LINC00116Q8NCU8 138 aa13.01□□□□□ -0.33
GTF3C2-210ENST00000480989 ADCY9O60503 1353 aa13.01□□□□□ -0.33
GTF3C2-210ENST00000480989 SLC24A1O60721 1099 aa13□□□□□ -0.33
GTF3C2-210ENST00000480989 ITPK1Q13572 414 aa13□□□□□ -0.33
GTF3C2-210ENST00000480989 EYA1Q99502 592 aa13□□□□□ -0.33
GTF3C2-210ENST00000480989 COL5A3P25940 1745 aaPredicted RBP12.99□□□□□ -0.33
GTF3C2-210ENST00000480989 ATP10DQ9P241 1426 aa12.99□□□□□ -0.33
GTF3C2-210ENST00000480989 WASHC2AQ641Q2 1341 aa12.99□□□□□ -0.33
GTF3C2-210ENST00000480989 KIF13BQ9NQT8 1826 aa12.99□□□□□ -0.33
GTF3C2-210ENST00000480989 KDRP35968 1356 aa12.98□□□□□ -0.33
GTF3C2-210ENST00000480989 POLKQ9UBT6 870 aa12.98□□□□□ -0.33
GTF3C2-210ENST00000480989 ASAP1Q9ULH1 1129 aa12.98□□□□□ -0.33
GTF3C2-210ENST00000480989 ZNF831Q5JPB2 1677 aa12.97□□□□□ -0.33
GTF3C2-210ENST00000480989 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
GTF3C2-210ENST00000480989 GIGYF1O75420 1035 aaPredicted RBP12.97□□□□□ -0.33
GTF3C2-210ENST00000480989 PHF14O94880 888 aa12.97□□□□□ -0.33
GTF3C2-210ENST00000480989 SLC4A9Q96Q91 983 aa12.97□□□□□ -0.33
GTF3C2-210ENST00000480989 WWC3Q9ULE0 1092 aa12.97□□□□□ -0.33
GTF3C2-210ENST00000480989 CD2APQ9Y5K6 639 aa12.97□□□□□ -0.33
GTF3C2-210ENST00000480989 CICQ96RK0 1608 aaPredicted RBP12.97□□□□□ -0.33
GTF3C2-210ENST00000480989 MYH14Q7Z406 1995 aaKnown RBP12.97□□□□□ -0.33
GTF3C2-210ENST00000480989 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
GTF3C2-210ENST00000480989 C4AP0C0L4 1744 aa12.96□□□□□ -0.33
GTF3C2-210ENST00000480989 LOC102724428A0A0B4J2F2 783 aa12.96□□□□□ -0.33
GTF3C2-210ENST00000480989 PPM1GO15355 546 aaPredicted RBP12.96□□□□□ -0.33
GTF3C2-210ENST00000480989 PHKG2P15735 406 aa12.96□□□□□ -0.33
GTF3C2-210ENST00000480989 SIK1P57059 783 aa12.96□□□□□ -0.33
GTF3C2-210ENST00000480989 EIF4A2Q14240 407 aaKnown RBP12.96□□□□□ -0.33
GTF3C2-210ENST00000480989 GRIN3BO60391 1043 aa12.95□□□□□ -0.34
GTF3C2-210ENST00000480989 CDCA8Q53HL2 280 aa12.95□□□□□ -0.34
GTF3C2-210ENST00000480989 SMARCC1Q92922 1105 aaPredicted RBP12.95□□□□□ -0.34
GTF3C2-210ENST00000480989 AK7Q96M32 723 aa12.95□□□□□ -0.34
GTF3C2-210ENST00000480989 ATG3Q9NT62 314 aa12.95□□□□□ -0.34
GTF3C2-210ENST00000480989 BRCA1P38398 1863 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms