RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 HSP90AB2PQ58FF8 381 aa26.23■■□□□ 1.79
ABCF3-214ENST00000480562 TIMELESSQ9UNS1 1208 aa26.23■■□□□ 1.79
ABCF3-214ENST00000480562 MTFR1LQ9H019 292 aa26.22■■□□□ 1.79
ABCF3-214ENST00000480562 SHANK3Q9BYB0 1731 aa26.21■■□□□ 1.79
ABCF3-214ENST00000480562 SMG6Q86US8 1419 aaKnown RBP26.21■■□□□ 1.79
ABCF3-214ENST00000480562 NSD3Q9BZ95 1437 aa26.2■■□□□ 1.78
ABCF3-214ENST00000480562 DOT1LQ8TEK3 1739 aa26.19■■□□□ 1.78
ABCF3-214ENST00000480562 DCAF8L1A6NGE4 600 aa26.19■■□□□ 1.78
ABCF3-214ENST00000480562 KCNQ4P56696 695 aa26.19■■□□□ 1.78
ABCF3-214ENST00000480562 INSRP06213 1382 aa26.19■■□□□ 1.78
ABCF3-214ENST00000480562 RAPGEF4Q8WZA2 1011 aa26.18■■□□□ 1.78
ABCF3-214ENST00000480562 NSD2O96028 1365 aa26.18■■□□□ 1.78
ABCF3-214ENST00000480562 FLT4P35916 1363 aa26.18■■□□□ 1.78
ABCF3-214ENST00000480562 YY1P25490 414 aa26.17■■□□□ 1.78
ABCF3-214ENST00000480562 SLC27A3Q5K4L6 730 aa26.17■■□□□ 1.78
ABCF3-214ENST00000480562 SGIP1Q9BQI5 828 aa26.17■■□□□ 1.78
ABCF3-214ENST00000480562 CLSPNQ9HAW4 1339 aa26.16■■□□□ 1.78
ABCF3-214ENST00000480562 AKT1S1Q96B36 256 aa26.16■■□□□ 1.78
ABCF3-214ENST00000480562 EMILIN1Q9Y6C2 1016 aa26.16■■□□□ 1.78
ABCF3-214ENST00000480562 TATP17735 454 aaPredicted RBP26.15■■□□□ 1.78
ABCF3-214ENST00000480562 FHDC1Q9C0D6 1143 aaPredicted RBP26.15■■□□□ 1.78
ABCF3-214ENST00000480562 CGNL1Q0VF96 1302 aa26.14■■□□□ 1.78
ABCF3-214ENST00000480562 POLR3GLQ9BT43 218 aa26.14■■□□□ 1.78
ABCF3-214ENST00000480562 KIF24Q5T7B8 1368 aa26.14■■□□□ 1.78
ABCF3-214ENST00000480562 PPM1GO15355 546 aaPredicted RBP26.12■■□□□ 1.77
ABCF3-214ENST00000480562 SYT17Q9BSW7 474 aa26.12■■□□□ 1.77
ABCF3-214ENST00000480562 ARXQ96QS3 562 aa26.1■■□□□ 1.77
ABCF3-214ENST00000480562 LY75O60449 1722 aa26.09■■□□□ 1.77
ABCF3-214ENST00000480562 TFCP2L1Q9NZI6 479 aa26.09■■□□□ 1.77
ABCF3-214ENST00000480562 CCNL1Q9UK58 526 aaPredicted RBP26.09■■□□□ 1.77
ABCF3-214ENST00000480562 PNPLA7Q6ZV29 1317 aa26.09■■□□□ 1.77
ABCF3-214ENST00000480562 PCDH11XQ9BZA7 1347 aa26.08■■□□□ 1.77
ABCF3-214ENST00000480562 PCDH11YQ9BZA8 1340 aa26.08■■□□□ 1.77
ABCF3-214ENST00000480562 CYP27B1O15528 508 aa26.05■■□□□ 1.76
ABCF3-214ENST00000480562 SLC16A10Q8TF71 515 aa26.05■■□□□ 1.76
ABCF3-214ENST00000480562 QSER1Q2KHR3 1735 aa26.05■■□□□ 1.76
ABCF3-214ENST00000480562 TUBGCP6Q96RT7 1819 aa26.04■■□□□ 1.76
ABCF3-214ENST00000480562 MPRIPQ6WCQ1 1025 aa26.03■■□□□ 1.76
ABCF3-214ENST00000480562 WASHC2AQ641Q2 1341 aa26.03■■□□□ 1.76
ABCF3-214ENST00000480562 HSPA5P11021 654 aaKnown RBP26.02■■□□□ 1.76
ABCF3-214ENST00000480562 EIF4G2P78344 907 aaKnown RBP eCLIP26.02■■□□□ 1.76
ABCF3-214ENST00000480562 POLKQ9UBT6 870 aa26.02■■□□□ 1.76
ABCF3-214ENST00000480562 ANKRD26Q9UPS8 1709 aa26.02■■□□□ 1.76
ABCF3-214ENST00000480562 MAP2P11137 1827 aaKnown RBP26.01■■□□□ 1.75
ABCF3-214ENST00000480562 TNNT2P45379 298 aaPredicted RBP26.01■■□□□ 1.75
ABCF3-214ENST00000480562 NCAPD2Q15021 1401 aa26■■□□□ 1.75
ABCF3-214ENST00000480562 POLD1P28340 1107 aa26■■□□□ 1.75
ABCF3-214ENST00000480562 KLHL34Q8N239 644 aa26■■□□□ 1.75
ABCF3-214ENST00000480562 CCER1Q8TC90 406 aaPredicted RBP26■■□□□ 1.75
ABCF3-214ENST00000480562 EYA1Q99502 592 aa26■■□□□ 1.75
ABCF3-214ENST00000480562 PALLDQ8WX93 1383 aa25.98■■□□□ 1.75
ABCF3-214ENST00000480562 MAP3K5Q99683 1374 aa25.98■■□□□ 1.75
ABCF3-214ENST00000480562 PKD1L3Q7Z443 1732 aa25.98■■□□□ 1.75
ABCF3-214ENST00000480562 TOGARAM1Q9Y4F4 1720 aa25.98■■□□□ 1.75
ABCF3-214ENST00000480562 MSH5O43196 834 aa25.98■■□□□ 1.75
ABCF3-214ENST00000480562 COL23A1Q86Y22 540 aaPredicted RBP25.97■■□□□ 1.75
ABCF3-214ENST00000480562 PANK3Q9H999 370 aa25.97■■□□□ 1.75
ABCF3-214ENST00000480562 SPG7Q9UQ90 795 aa25.97■■□□□ 1.75
ABCF3-214ENST00000480562 UTRNP46939 3433 aa25.95■■□□□ 1.75
ABCF3-214ENST00000480562 COL24A1Q17RW2 1714 aa25.95■■□□□ 1.74
ABCF3-214ENST00000480562 ITGB4P16144 1822 aa25.94■■□□□ 1.74
ABCF3-214ENST00000480562 EIF4A2Q14240 407 aaKnown RBP25.94■■□□□ 1.74
ABCF3-214ENST00000480562 C5P01031 1676 aa25.93■■□□□ 1.74
ABCF3-214ENST00000480562 NKX1-1Q15270 411 aaPredicted RBP25.93■■□□□ 1.74
ABCF3-214ENST00000480562 PIGBQ92521 554 aa25.93■■□□□ 1.74
ABCF3-214ENST00000480562 MSL1Q68DK7 614 aa25.91■■□□□ 1.74
ABCF3-214ENST00000480562 SMARCC1Q92922 1105 aaPredicted RBP25.91■■□□□ 1.74
ABCF3-214ENST00000480562 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.9■■□□□ 1.74
ABCF3-214ENST00000480562 GPR162Q16538 588 aa25.89■■□□□ 1.74
ABCF3-214ENST00000480562 TAF1LQ8IZX4 1826 aa25.88■■□□□ 1.73
ABCF3-214ENST00000480562 PHKG2P15735 406 aa25.88■■□□□ 1.73
ABCF3-214ENST00000480562 NLGN2Q8NFZ4 835 aa25.88■■□□□ 1.73
ABCF3-214ENST00000480562 IFNL2Q8IZJ0 200 aa25.87■■□□□ 1.73
ABCF3-214ENST00000480562 PELP1Q8IZL8 1130 aaKnown RBP25.87■■□□□ 1.73
ABCF3-214ENST00000480562 TMOD3Q9NYL9 352 aa25.87■■□□□ 1.73
ABCF3-214ENST00000480562 HMGB2P26583 209 aaKnown RBP25.85■■□□□ 1.73
ABCF3-214ENST00000480562 SMIM5Q71RC9 77 aa25.85■■□□□ 1.73
ABCF3-214ENST00000480562 AMIGO3Q86WK7 504 aa25.85■■□□□ 1.73
ABCF3-214ENST00000480562 ZNF784Q8NCA9 323 aaPredicted RBP25.85■■□□□ 1.73
ABCF3-214ENST00000480562 AK7Q96M32 723 aa25.85■■□□□ 1.73
ABCF3-214ENST00000480562 C4BP0C0L5 1744 aa25.85■■□□□ 1.73
ABCF3-214ENST00000480562 FLAD1Q8NFF5 587 aa25.84■■□□□ 1.73
ABCF3-214ENST00000480562 ASAP1Q9ULH1 1129 aa25.84■■□□□ 1.73
ABCF3-214ENST00000480562 IGSF1Q8N6C5 1336 aa25.84■■□□□ 1.73
ABCF3-214ENST00000480562 CHD4Q14839 1912 aa25.83■■□□□ 1.73
ABCF3-214ENST00000480562 LOC102724428A0A0B4J2F2 783 aa25.83■■□□□ 1.73
ABCF3-214ENST00000480562 SIK1P57059 783 aa25.83■■□□□ 1.73
ABCF3-214ENST00000480562 MORC1Q86VD1 984 aa25.83■■□□□ 1.73
ABCF3-214ENST00000480562 LINC00116Q8NCU8 138 aa25.82■■□□□ 1.72
ABCF3-214ENST00000480562 PHF14O94880 888 aa25.81■■□□□ 1.72
ABCF3-214ENST00000480562 ITPK1Q13572 414 aa25.79■■□□□ 1.72
ABCF3-214ENST00000480562 ATG3Q9NT62 314 aa25.79■■□□□ 1.72
ABCF3-214ENST00000480562 GOLGB1Q14789 3259 aaKnown RBP25.78■■□□□ 1.72
ABCF3-214ENST00000480562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.78■■□□□ 1.72
ABCF3-214ENST00000480562 KNSTRNQ9Y448 316 aa25.78■■□□□ 1.72
ABCF3-214ENST00000480562 UBR3Q6ZT12 1888 aa25.77■■□□□ 1.72
ABCF3-214ENST00000480562 ATP6V1AP38606 617 aa25.77■■□□□ 1.72
ABCF3-214ENST00000480562 PLEKHO1Q53GL0 409 aaPredicted RBP25.77■■□□□ 1.72
ABCF3-214ENST00000480562 AEBP1Q8IUX7 1158 aa25.77■■□□□ 1.72
ABCF3-214ENST00000480562 PLEKHG2Q9H7P9 1386 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms