RNA–Protein interactions for RNA: ENST00000480340.1

DENND4B-208, Transcript of DENN domain containing 4B, humanhuman

TSL 2

Gene DENND4B, Length 2,530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-208ENST00000480340 CCDC27Q2M243 656 aa18.2■□□□□ 0.5
DENND4B-208ENST00000480340 PHF23Q9BUL5 403 aaPredicted RBP18.2■□□□□ 0.5
DENND4B-208ENST00000480340 PRDM11Q9NQV5 511 aa18.2■□□□□ 0.5
DENND4B-208ENST00000480340 TRIM35Q9UPQ4 493 aa18.2■□□□□ 0.5
DENND4B-208ENST00000480340 ERBB3P21860 1342 aa18.19■□□□□ 0.5
DENND4B-208ENST00000480340 SLFN5Q08AF3 891 aa18.18■□□□□ 0.5
DENND4B-208ENST00000480340 MS4A1P11836 297 aa18.17■□□□□ 0.5
DENND4B-208ENST00000480340 NCBP3Q53F19 620 aaKnown RBP18.17■□□□□ 0.5
DENND4B-208ENST00000480340 COL22A1Q8NFW1 1626 aaPredicted RBP18.17■□□□□ 0.5
DENND4B-208ENST00000480340 DUSP27Q5VZP5 1158 aa18.17■□□□□ 0.5
DENND4B-208ENST00000480340 CSB-PGBD3P0DP91 1061 aa18.16■□□□□ 0.5
DENND4B-208ENST00000480340 WDR63Q8IWG1 891 aa18.16■□□□□ 0.5
DENND4B-208ENST00000480340 ABCC6O95255 1503 aa18.16■□□□□ 0.5
DENND4B-208ENST00000480340 E9PSI1 815 aa18.15■□□□□ 0.5
DENND4B-208ENST00000480340 NLRP2Q9NX02 1062 aa18.15■□□□□ 0.5
DENND4B-208ENST00000480340 LMO7Q8WWI1 1683 aa18.15■□□□□ 0.5
DENND4B-208ENST00000480340 CAMTA1Q9Y6Y1 1673 aa18.15■□□□□ 0.5
DENND4B-208ENST00000480340 MTHFSDQ2M296 383 aaKnown RBP18.14■□□□□ 0.49
DENND4B-208ENST00000480340 THUMPD2Q9BTF0 503 aaKnown RBP18.14■□□□□ 0.49
DENND4B-208ENST00000480340 FAM208AQ9UK61 1670 aaKnown RBP18.14■□□□□ 0.49
DENND4B-208ENST00000480340 FAM83GA6ND36 823 aa18.13■□□□□ 0.49
DENND4B-208ENST00000480340 TRMT2AQ8IZ69 625 aaKnown RBP18.13■□□□□ 0.49
DENND4B-208ENST00000480340 CRBNQ96SW2 442 aa18.13■□□□□ 0.49
DENND4B-208ENST00000480340 DCTN1Q14203 1278 aa18.12■□□□□ 0.49
DENND4B-208ENST00000480340 SLC4A3P48751 1232 aa18.12■□□□□ 0.49
DENND4B-208ENST00000480340 BRPF3Q9ULD4 1205 aa18.11■□□□□ 0.49
DENND4B-208ENST00000480340 NCAPD2Q15021 1401 aa18.11■□□□□ 0.49
DENND4B-208ENST00000480340 LMOD3Q0VAK6 560 aa18.11■□□□□ 0.49
DENND4B-208ENST00000480340 GAS2L2Q8NHY3 880 aa18.1■□□□□ 0.49
DENND4B-208ENST00000480340 STRN4Q9NRL3 753 aa18.1■□□□□ 0.49
DENND4B-208ENST00000480340 COL5A2P05997 1499 aaPredicted RBP18.1■□□□□ 0.49
DENND4B-208ENST00000480340 NUTM2BA6NNL0 878 aaPredicted RBP18.09■□□□□ 0.49
DENND4B-208ENST00000480340 NUTM2EB1AL46 878 aaPredicted RBP18.09■□□□□ 0.49
DENND4B-208ENST00000480340 C20orf194Q5TEA3 1177 aa18.09■□□□□ 0.49
DENND4B-208ENST00000480340 NUTM2AQ8IVF1 878 aaPredicted RBP18.09■□□□□ 0.49
DENND4B-208ENST00000480340 ADAMTS2O95450 1211 aa18.09■□□□□ 0.49
DENND4B-208ENST00000480340 MCM10Q7L590 875 aa18.09■□□□□ 0.49
DENND4B-208ENST00000480340 TSR2Q969E8 191 aaKnown RBP18.09■□□□□ 0.49
DENND4B-208ENST00000480340 COL14A1Q05707 1796 aaKnown RBP18.08■□□□□ 0.49
DENND4B-208ENST00000480340 EVA1CP58658 441 aa18.08■□□□□ 0.48
DENND4B-208ENST00000480340 TOM1L2Q6ZVM7 507 aa18.08■□□□□ 0.48
DENND4B-208ENST00000480340 MYH16Q9H6N6 1097 aa18.08■□□□□ 0.48
DENND4B-208ENST00000480340 WDR17Q8IZU2 1322 aa18.08■□□□□ 0.48
DENND4B-208ENST00000480340 BTG4Q9NY30 223 aa18.07■□□□□ 0.48
DENND4B-208ENST00000480340 IL16Q14005 1332 aa18.07■□□□□ 0.48
DENND4B-208ENST00000480340 NFKBIBQ15653 356 aa18.06■□□□□ 0.48
DENND4B-208ENST00000480340 RTF1Q92541 710 aaKnown RBP18.06■□□□□ 0.48
DENND4B-208ENST00000480340 VIRMAQ69YN4 1812 aaKnown RBP18.06■□□□□ 0.48
DENND4B-208ENST00000480340 RAPGEF4Q8WZA2 1011 aa18.06■□□□□ 0.48
DENND4B-208ENST00000480340 CALD1Q05682 793 aaKnown RBP18.05■□□□□ 0.48
DENND4B-208ENST00000480340 LARP1Q6PKG0 1096 aaKnown RBP18.05■□□□□ 0.48
DENND4B-208ENST00000480340 PLEKHO1Q53GL0 409 aaPredicted RBP18.05■□□□□ 0.48
DENND4B-208ENST00000480340 GNAT3A8MTJ3 354 aa18.04■□□□□ 0.48
DENND4B-208ENST00000480340 GSE1Q14687 1217 aa18.04■□□□□ 0.48
DENND4B-208ENST00000480340 MEGF6O75095 1541 aa18.04■□□□□ 0.48
DENND4B-208ENST00000480340 PLCH1Q4KWH8 1693 aa18.04■□□□□ 0.48
DENND4B-208ENST00000480340 ZNF530Q6P9A1 599 aaPredicted RBP18.04■□□□□ 0.48
DENND4B-208ENST00000480340 MAP3K5Q99683 1374 aa18.04■□□□□ 0.48
DENND4B-208ENST00000480340 TATP17735 454 aaPredicted RBP18.03■□□□□ 0.48
DENND4B-208ENST00000480340 AMOTQ4VCS5 1084 aa18.03■□□□□ 0.48
DENND4B-208ENST00000480340 DDRGK1Q96HY6 314 aa18.03■□□□□ 0.48
DENND4B-208ENST00000480340 JCADQ9P266 1359 aa18.02■□□□□ 0.48
DENND4B-208ENST00000480340 KDM2BQ8NHM5 1336 aa18.02■□□□□ 0.48
DENND4B-208ENST00000480340 HSPA1LP34931 641 aa18.02■□□□□ 0.48
DENND4B-208ENST00000480340 GNAI1P63096 354 aa18.02■□□□□ 0.47
DENND4B-208ENST00000480340 EXOSC9Q06265 439 aaKnown RBP18.02■□□□□ 0.47
DENND4B-208ENST00000480340 FRAT1Q92837 279 aaPredicted RBP18.02■□□□□ 0.47
DENND4B-208ENST00000480340 IFT57Q9NWB7 429 aa18.02■□□□□ 0.47
DENND4B-208ENST00000480340 HTATSF1O43719 755 aaKnown RBP18■□□□□ 0.47
DENND4B-208ENST00000480340 ZNF853P0CG23 659 aa18■□□□□ 0.47
DENND4B-208ENST00000480340 CFAP44Q96MT7 982 aa18■□□□□ 0.47
DENND4B-208ENST00000480340 CARD10Q9BWT7 1032 aa18■□□□□ 0.47
DENND4B-208ENST00000480340 MBIPQ9NS73 344 aa18■□□□□ 0.47
DENND4B-208ENST00000480340 IL17REQ8NFR9 667 aa18■□□□□ 0.47
DENND4B-208ENST00000480340 PARP4Q9UKK3 1724 aaKnown RBP17.99■□□□□ 0.47
DENND4B-208ENST00000480340 C1orf141Q5JVX7 400 aa17.99■□□□□ 0.47
DENND4B-208ENST00000480340 CRB1P82279 1406 aa17.99■□□□□ 0.47
DENND4B-208ENST00000480340 LRRC37A3O60309 1634 aa17.99■□□□□ 0.47
DENND4B-208ENST00000480340 AKAP4Q5JQC9 854 aa17.99■□□□□ 0.47
DENND4B-208ENST00000480340 PKD1L3Q7Z443 1732 aa17.98■□□□□ 0.47
DENND4B-208ENST00000480340 MIS18AQ9NYP9 233 aa17.98■□□□□ 0.47
DENND4B-208ENST00000480340 MPRIPQ6WCQ1 1025 aa17.98■□□□□ 0.47
DENND4B-208ENST00000480340 LGR6Q9HBX8 967 aa17.98■□□□□ 0.47
DENND4B-208ENST00000480340 C8orf34Q49A92 452 aa17.97■□□□□ 0.47
DENND4B-208ENST00000480340 SPG7Q9UQ90 795 aa17.97■□□□□ 0.47
DENND4B-208ENST00000480340 NRAPQ86VF7 1730 aa17.97■□□□□ 0.47
DENND4B-208ENST00000480340 BCAR3O75815 825 aa17.97■□□□□ 0.47
DENND4B-208ENST00000480340 EIF5BO60841 1220 aaKnown RBP17.96■□□□□ 0.47
DENND4B-208ENST00000480340 OVOS2A0A0G2JMS6 1433 aa17.95■□□□□ 0.46
DENND4B-208ENST00000480340 CHL1O00533 1208 aa17.95■□□□□ 0.46
DENND4B-208ENST00000480340 IL2RBP14784 551 aa17.95■□□□□ 0.46
DENND4B-208ENST00000480340 NWD2Q9ULI1 1742 aa17.95■□□□□ 0.46
DENND4B-208ENST00000480340 ELL2O00472 640 aaPredicted RBP17.95■□□□□ 0.46
DENND4B-208ENST00000480340 ILDR2Q71H61 639 aa17.95■□□□□ 0.46
DENND4B-208ENST00000480340 C8orf37Q96NL8 207 aa17.95■□□□□ 0.46
DENND4B-208ENST00000480340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.95■□□□□ 0.46
DENND4B-208ENST00000480340 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
DENND4B-208ENST00000480340 SCN11AQ9UI33 1791 aa17.94■□□□□ 0.46
DENND4B-208ENST00000480340 TSPYL4Q9UJ04 414 aa17.94■□□□□ 0.46
DENND4B-208ENST00000480340 CEMIPQ8WUJ3 1361 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms