RNA–Protein interactions for RNA: ENST00000479992.5

RPL13A-209, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 850 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-209ENST00000479992 PARD3Q8TEW0 1356 aa21.58■■□□□ 1.04
RPL13A-209ENST00000479992 COL3A1P02461 1466 aaPredicted RBP21.58■■□□□ 1.04
RPL13A-209ENST00000479992 BCL9O00512 1426 aa21.57■■□□□ 1.04
RPL13A-209ENST00000479992 PPP2R1AP30153 589 aa21.57■■□□□ 1.04
RPL13A-209ENST00000479992 DIAPH1O60610 1272 aaKnown RBP21.55■■□□□ 1.04
RPL13A-209ENST00000479992 AEBP1Q8IUX7 1158 aa21.55■■□□□ 1.04
RPL13A-209ENST00000479992 PKD1L3Q7Z443 1732 aa21.55■■□□□ 1.04
RPL13A-209ENST00000479992 BAG6P46379 1132 aa21.54■■□□□ 1.04
RPL13A-209ENST00000479992 ACSBG1Q96GR2 724 aa21.54■■□□□ 1.04
RPL13A-209ENST00000479992 PCDH11XQ9BZA7 1347 aa21.54■■□□□ 1.04
RPL13A-209ENST00000479992 PCDH11YQ9BZA8 1340 aa21.54■■□□□ 1.04
RPL13A-209ENST00000479992 SBF2Q86WG5 1849 aa21.53■■□□□ 1.04
RPL13A-209ENST00000479992 SULT6B1Q6IMI4 303 aa21.53■■□□□ 1.04
RPL13A-209ENST00000479992 PTF1AQ7RTS3 328 aa21.53■■□□□ 1.04
RPL13A-209ENST00000479992 APBA3O96018 575 aa21.52■■□□□ 1.04
RPL13A-209ENST00000479992 CFAP53Q96M91 514 aa21.52■■□□□ 1.04
RPL13A-209ENST00000479992 NHSQ6T4R5 1651 aa21.51■■□□□ 1.03
RPL13A-209ENST00000479992 EN1Q05925 392 aaPredicted RBP21.51■■□□□ 1.03
RPL13A-209ENST00000479992 KDRP35968 1356 aa21.5■■□□□ 1.03
RPL13A-209ENST00000479992 PLEKHG2Q9H7P9 1386 aa21.5■■□□□ 1.03
RPL13A-209ENST00000479992 KCNQ2O43526 872 aa21.5■■□□□ 1.03
RPL13A-209ENST00000479992 BCL11BQ9C0K0 894 aaPredicted RBP21.5■■□□□ 1.03
RPL13A-209ENST00000479992 SPG7Q9UQ90 795 aa21.5■■□□□ 1.03
RPL13A-209ENST00000479992 DOT1LQ8TEK3 1739 aa21.49■■□□□ 1.03
RPL13A-209ENST00000479992 U2SURPO15042 1029 aaKnown RBP21.49■■□□□ 1.03
RPL13A-209ENST00000479992 CYP27B1O15528 508 aa21.49■■□□□ 1.03
RPL13A-209ENST00000479992 HMOX1P09601 288 aa21.49■■□□□ 1.03
RPL13A-209ENST00000479992 RALBP1Q15311 655 aa21.47■■□□□ 1.03
RPL13A-209ENST00000479992 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.47■■□□□ 1.031e-40■□□□□ 10
RPL13A-209ENST00000479992 EZH2Q15910 746 aaKnown RBP21.46■■□□□ 1.03
RPL13A-209ENST00000479992 SYTL4Q96C24 671 aaPredicted RBP21.46■■□□□ 1.03
RPL13A-209ENST00000479992 PLEKHO1Q53GL0 409 aaPredicted RBP21.44■■□□□ 1.02
RPL13A-209ENST00000479992 CAMKK2Q96RR4 588 aa21.44■■□□□ 1.02
RPL13A-209ENST00000479992 PHKG2P15735 406 aa21.43■■□□□ 1.02
RPL13A-209ENST00000479992 PRIM1P49642 420 aaKnown RBP21.43■■□□□ 1.02
RPL13A-209ENST00000479992 TOGARAM1Q9Y4F4 1720 aa21.43■■□□□ 1.02
RPL13A-209ENST00000479992 BTAF1O14981 1849 aa21.42■■□□□ 1.02
RPL13A-209ENST00000479992 AMOTQ4VCS5 1084 aa21.42■■□□□ 1.02
RPL13A-209ENST00000479992 ZNF530Q6P9A1 599 aaPredicted RBP21.42■■□□□ 1.02
RPL13A-209ENST00000479992 IFNL2Q8IZJ0 200 aa21.42■■□□□ 1.02
RPL13A-209ENST00000479992 MYBBP1AQ9BQG0 1328 aaKnown RBP21.42■■□□□ 1.02
RPL13A-209ENST00000479992 NUDCQ9Y266 331 aa21.42■■□□□ 1.02
RPL13A-209ENST00000479992 PRKRIP1Q9H875 184 aaPredicted RBP21.41■■□□□ 1.02
RPL13A-209ENST00000479992 RGPD3A6NKT7 1758 aaPredicted RBP21.41■■□□□ 1.02
RPL13A-209ENST00000479992 RGPD4Q7Z3J3 1758 aa21.41■■□□□ 1.02
RPL13A-209ENST00000479992 RREB1Q92766 1687 aa21.4■■□□□ 1.02
RPL13A-209ENST00000479992 PLSCR1O15162 318 aa21.39■■□□□ 1.01
RPL13A-209ENST00000479992 U2AF1L5P0DN76 240 aaPredicted RBP21.39■■□□□ 1.01
RPL13A-209ENST00000479992 U2AF1Q01081 240 aaKnown RBP eCLIP21.39■■□□□ 1.01
RPL13A-209ENST00000479992 NKX1-1Q15270 411 aaPredicted RBP21.39■■□□□ 1.01
RPL13A-209ENST00000479992 NUP188Q5SRE5 1749 aa21.38■■□□□ 1.01
RPL13A-209ENST00000479992 C1orf141Q5JVX7 400 aa21.37■■□□□ 1.01
RPL13A-209ENST00000479992 MPRIPQ6WCQ1 1025 aa21.36■■□□□ 1.01
RPL13A-209ENST00000479992 RSPH6AQ9H0K4 717 aa21.36■■□□□ 1.01
RPL13A-209ENST00000479992 KDM6AO15550 1401 aaPredicted RBP21.36■■□□□ 1.01
RPL13A-209ENST00000479992 PRKAR2BP31323 418 aa21.35■■□□□ 1.01
RPL13A-209ENST00000479992 KAT6BQ8WYB5 2073 aa21.34■■□□□ 1.01
RPL13A-209ENST00000479992 HSP90AB1P08238 724 aaKnown RBP21.34■■□□□ 1.01
RPL13A-209ENST00000479992 MTHFSDQ2M296 383 aaKnown RBP21.34■■□□□ 1.01
RPL13A-209ENST00000479992 DCAF5Q96JK2 942 aa21.34■■□□□ 1.01
RPL13A-209ENST00000479992 TXNRD1Q16881 649 aa21.33■■□□□ 1.01
RPL13A-209ENST00000479992 PROM2Q8N271 834 aa21.33■■□□□ 1.01
RPL13A-209ENST00000479992 ITGB4P16144 1822 aa21.32■■□□□ 1
RPL13A-209ENST00000479992 AKAP4Q5JQC9 854 aa21.32■■□□□ 1
RPL13A-209ENST00000479992 TMOD3Q9NYL9 352 aa21.32■■□□□ 1
RPL13A-209ENST00000479992 PIGBQ92521 554 aa21.31■■□□□ 1
RPL13A-209ENST00000479992 FCHSD2O94868 740 aa21.3■■□□□ 1
RPL13A-209ENST00000479992 PHACTR3Q96KR7 559 aa21.3■■□□□ 1
RPL13A-209ENST00000479992 PALLDQ8WX93 1383 aa21.29■■□□□ 1
RPL13A-209ENST00000479992 PSDA5PKW4 1024 aaPredicted RBP21.29■■□□□ 1
RPL13A-209ENST00000479992 ERVV-2B6SEH9 535 aa21.28■■□□□ 1
RPL13A-209ENST00000479992 GAS2L2Q8NHY3 880 aa21.28■■□□□ 1
RPL13A-209ENST00000479992 ANO8Q9HCE9 1232 aaPredicted RBP21.28■■□□□ 1
RPL13A-209ENST00000479992 MAP3K5Q99683 1374 aa21.27■■□□□ 1
RPL13A-209ENST00000479992 KCNQ4P56696 695 aa21.27■■□□□ 1
RPL13A-209ENST00000479992 CABP4P57796 275 aa21.27■■□□□ 1
RPL13A-209ENST00000479992 R3HDM1Q15032 1099 aaKnown RBP21.27■■□□□ 1
RPL13A-209ENST00000479992 NBPF14Q5TI25 921 aa21.27■■□□□ 1
RPL13A-209ENST00000479992 LY75O60449 1722 aa21.26■□□□□ 0.99
RPL13A-209ENST00000479992 ANP32CO43423 234 aa21.26■□□□□ 0.99
RPL13A-209ENST00000479992 LRRC4BQ9NT99 713 aa21.26■□□□□ 0.99
RPL13A-209ENST00000479992 SCN11AQ9UI33 1791 aa21.25■□□□□ 0.99
RPL13A-209ENST00000479992 LGR6Q9HBX8 967 aa21.25■□□□□ 0.99
RPL13A-209ENST00000479992 ASAP1Q9ULH1 1129 aa21.25■□□□□ 0.99
RPL13A-209ENST00000479992 PAPPAQ13219 1627 aa21.25■□□□□ 0.99
RPL13A-209ENST00000479992 ADAMTS7Q9UKP4 1686 aa21.24■□□□□ 0.99
RPL13A-209ENST00000479992 RNMTO43148 476 aaKnown RBP21.24■□□□□ 0.99
RPL13A-209ENST00000479992 SLC27A3Q5K4L6 730 aa21.24■□□□□ 0.99
RPL13A-209ENST00000479992 SMARCC1Q92922 1105 aaPredicted RBP21.24■□□□□ 0.99
RPL13A-209ENST00000479992 CCNL1Q9UK58 526 aaPredicted RBP21.24■□□□□ 0.99
RPL13A-209ENST00000479992 MRC1P22897 1456 aa21.24■□□□□ 0.99
RPL13A-209ENST00000479992 GNAT3A8MTJ3 354 aa21.23■□□□□ 0.99
RPL13A-209ENST00000479992 WDR43Q15061 677 aaKnown RBP eCLIP21.23■□□□□ 0.99
RPL13A-209ENST00000479992 PLEKHF1Q96S99 279 aa21.23■□□□□ 0.99
RPL13A-209ENST00000479992 NEFMP07197 916 aa21.22■□□□□ 0.99
RPL13A-209ENST00000479992 NFATC2IPQ8NCF5 419 aa21.22■□□□□ 0.99
RPL13A-209ENST00000479992 SLC52A2Q9HAB3 445 aa21.21■□□□□ 0.99
RPL13A-209ENST00000479992 ATG3Q9NT62 314 aa21.21■□□□□ 0.99
RPL13A-209ENST00000479992 STK32BQ9NY57 414 aa21.21■□□□□ 0.99
RPL13A-209ENST00000479992 MAPK8IP3Q9UPT6 1336 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms