RNA–Protein interactions for RNA: ENST00000474171.1

RPL13A-205, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 521 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-205ENST00000474171 LY75O60449 1722 aa15.57■□□□□ 0.08
RPL13A-205ENST00000474171 TUBGCP6Q96RT7 1819 aa15.57■□□□□ 0.08
RPL13A-205ENST00000474171 EIF4G2P78344 907 aaKnown RBP eCLIP15.57■□□□□ 0.08
RPL13A-205ENST00000474171 INSRP06213 1382 aa15.57■□□□□ 0.08
RPL13A-205ENST00000474171 FLT4P35916 1363 aa15.57■□□□□ 0.08
RPL13A-205ENST00000474171 ITGB4P16144 1822 aa15.55■□□□□ 0.08
RPL13A-205ENST00000474171 PKD1L3Q7Z443 1732 aa15.55■□□□□ 0.08
RPL13A-205ENST00000474171 TOGARAM1Q9Y4F4 1720 aa15.55■□□□□ 0.08
RPL13A-205ENST00000474171 ZCRB1Q8TBF4 217 aaKnown RBP15.55■□□□□ 0.08
RPL13A-205ENST00000474171 SMG6Q86US8 1419 aaKnown RBP15.54■□□□□ 0.08
RPL13A-205ENST00000474171 NSD2O96028 1365 aa15.54■□□□□ 0.08
RPL13A-205ENST00000474171 LRRC4BQ9NT99 713 aa15.54■□□□□ 0.08
RPL13A-205ENST00000474171 KIF24Q5T7B8 1368 aa15.53■□□□□ 0.08
RPL13A-205ENST00000474171 PRIM1P49642 420 aaKnown RBP15.53■□□□□ 0.08
RPL13A-205ENST00000474171 SLC15A2Q16348 729 aa15.53■□□□□ 0.08
RPL13A-205ENST00000474171 QSER1Q2KHR3 1735 aa15.52■□□□□ 0.08
RPL13A-205ENST00000474171 CGNL1Q0VF96 1302 aa15.52■□□□□ 0.08
RPL13A-205ENST00000474171 PPM1GO15355 546 aaPredicted RBP15.52■□□□□ 0.08
RPL13A-205ENST00000474171 KCNQ4P56696 695 aa15.52■□□□□ 0.08
RPL13A-205ENST00000474171 SPON1Q9HCB6 807 aa15.52■□□□□ 0.08
RPL13A-205ENST00000474171 STK32BQ9NY57 414 aa15.52■□□□□ 0.08
RPL13A-205ENST00000474171 NCAPD2Q15021 1401 aa15.51■□□□□ 0.07
RPL13A-205ENST00000474171 ZBTB7AO95365 584 aa15.51■□□□□ 0.07
RPL13A-205ENST00000474171 ZNF827Q17R98 1081 aa15.51■□□□□ 0.07
RPL13A-205ENST00000474171 SYTL4Q96C24 671 aaPredicted RBP15.51■□□□□ 0.07
RPL13A-205ENST00000474171 PANK3Q9H999 370 aa15.51■□□□□ 0.07
RPL13A-205ENST00000474171 POLKQ9UBT6 870 aa15.51■□□□□ 0.07
RPL13A-205ENST00000474171 TNNT2P45379 298 aaPredicted RBP15.5■□□□□ 0.07
RPL13A-205ENST00000474171 RAPGEF4Q8WZA2 1011 aa15.5■□□□□ 0.07
RPL13A-205ENST00000474171 WASHC2AQ641Q2 1341 aa15.49■□□□□ 0.07
RPL13A-205ENST00000474171 TATP17735 454 aaPredicted RBP15.49■□□□□ 0.07
RPL13A-205ENST00000474171 ATF5Q9Y2D1 282 aaPredicted RBP15.49■□□□□ 0.07
RPL13A-205ENST00000474171 TAF1LQ8IZX4 1826 aa15.49■□□□□ 0.07
RPL13A-205ENST00000474171 CYP27B1O15528 508 aa15.48■□□□□ 0.07
RPL13A-205ENST00000474171 PTGER2P43116 358 aa15.48■□□□□ 0.07
RPL13A-205ENST00000474171 EYA1Q99502 592 aa15.47■□□□□ 0.07
RPL13A-205ENST00000474171 COL24A1Q17RW2 1714 aa15.46■□□□□ 0.07
RPL13A-205ENST00000474171 AKT1S1Q96B36 256 aa15.46■□□□□ 0.07
RPL13A-205ENST00000474171 PPP1R1BQ9UD71 204 aaPredicted RBP15.46■□□□□ 0.07
RPL13A-205ENST00000474171 C5P01031 1676 aa15.46■□□□□ 0.07
RPL13A-205ENST00000474171 PCDH11XQ9BZA7 1347 aa15.45■□□□□ 0.06
RPL13A-205ENST00000474171 PCDH11YQ9BZA8 1340 aa15.45■□□□□ 0.06
RPL13A-205ENST00000474171 EIF4A2Q14240 407 aaKnown RBP15.45■□□□□ 0.06
RPL13A-205ENST00000474171 SGIP1Q9BQI5 828 aa15.44■□□□□ 0.06
RPL13A-205ENST00000474171 KIF7Q2M1P5 1343 aa15.43■□□□□ 0.06
RPL13A-205ENST00000474171 SLC27A3Q5K4L6 730 aa15.43■□□□□ 0.06
RPL13A-205ENST00000474171 MTFR1LQ9H019 292 aa15.42■□□□□ 0.06
RPL13A-205ENST00000474171 PNPLA7Q6ZV29 1317 aa15.42■□□□□ 0.06
RPL13A-205ENST00000474171 MPRIPQ6WCQ1 1025 aa15.41■□□□□ 0.06
RPL13A-205ENST00000474171 CCNL1Q9UK58 526 aaPredicted RBP15.41■□□□□ 0.06
RPL13A-205ENST00000474171 NKX1-1Q15270 411 aaPredicted RBP15.39■□□□□ 0.05
RPL13A-205ENST00000474171 MORC1Q86VD1 984 aa15.39■□□□□ 0.05
RPL13A-205ENST00000474171 UBR3Q6ZT12 1888 aa15.39■□□□□ 0.05
RPL13A-205ENST00000474171 IGSF1Q8N6C5 1336 aa15.39■□□□□ 0.05
RPL13A-205ENST00000474171 VIRMAQ69YN4 1812 aaKnown RBP15.38■□□□□ 0.05
RPL13A-205ENST00000474171 PALLDQ8WX93 1383 aa15.38■□□□□ 0.05
RPL13A-205ENST00000474171 C4BP0C0L5 1744 aa15.38■□□□□ 0.05
RPL13A-205ENST00000474171 AMER1Q5JTC6 1135 aaPredicted RBP15.38■□□□□ 0.05
RPL13A-205ENST00000474171 PIGBQ92521 554 aa15.38■□□□□ 0.05
RPL13A-205ENST00000474171 FHDC1Q9C0D6 1143 aaPredicted RBP15.38■□□□□ 0.05
RPL13A-205ENST00000474171 SPG7Q9UQ90 795 aa15.38■□□□□ 0.05
RPL13A-205ENST00000474171 PHKG2P15735 406 aa15.37■□□□□ 0.05
RPL13A-205ENST00000474171 TFCP2L1Q9NZI6 479 aa15.37■□□□□ 0.05
RPL13A-205ENST00000474171 KNSTRNQ9Y448 316 aa15.37■□□□□ 0.05
RPL13A-205ENST00000474171 AEBP1Q8IUX7 1158 aa15.36■□□□□ 0.05
RPL13A-205ENST00000474171 SYT17Q9BSW7 474 aa15.36■□□□□ 0.05
RPL13A-205ENST00000474171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.36■□□□□ 0.051e-40■□□□□ 10
RPL13A-205ENST00000474171 PER1O15534 1290 aaPredicted RBP15.35■□□□□ 0.05
RPL13A-205ENST00000474171 COL23A1Q86Y22 540 aaPredicted RBP15.35■□□□□ 0.05
RPL13A-205ENST00000474171 ARXQ96QS3 562 aa15.35■□□□□ 0.05
RPL13A-205ENST00000474171 SMIM5Q71RC9 77 aa15.34■□□□□ 0.05
RPL13A-205ENST00000474171 AMIGO3Q86WK7 504 aa15.34■□□□□ 0.05
RPL13A-205ENST00000474171 IFNL2Q8IZJ0 200 aa15.34■□□□□ 0.05
RPL13A-205ENST00000474171 SLC16A10Q8TF71 515 aa15.33■□□□□ 0.04
RPL13A-205ENST00000474171 ASAP1Q9ULH1 1129 aa15.33■□□□□ 0.04
RPL13A-205ENST00000474171 SCN11AQ9UI33 1791 aa15.33■□□□□ 0.04
RPL13A-205ENST00000474171 IL13P35225 146 aa15.32■□□□□ 0.04
RPL13A-205ENST00000474171 KDM6AO15550 1401 aaPredicted RBP15.32■□□□□ 0.04
RPL13A-205ENST00000474171 CHD4Q14839 1912 aa15.31■□□□□ 0.04
RPL13A-205ENST00000474171 CC2D1BQ5T0F9 858 aaKnown RBP15.31■□□□□ 0.04
RPL13A-205ENST00000474171 SMARCC1Q92922 1105 aaPredicted RBP15.31■□□□□ 0.04
RPL13A-205ENST00000474171 TMOD3Q9NYL9 352 aa15.31■□□□□ 0.04
RPL13A-205ENST00000474171 COL5A3P25940 1745 aaPredicted RBP15.31■□□□□ 0.04
RPL13A-205ENST00000474171 MSH5O43196 834 aa15.3■□□□□ 0.04
RPL13A-205ENST00000474171 ITPK1Q13572 414 aa15.3■□□□□ 0.04
RPL13A-205ENST00000474171 MSL1Q68DK7 614 aa15.3■□□□□ 0.04
RPL13A-205ENST00000474171 SULT6B1Q6IMI4 303 aa15.3■□□□□ 0.04
RPL13A-205ENST00000474171 LINC00116Q8NCU8 138 aa15.3■□□□□ 0.04
RPL13A-205ENST00000474171 PLEKHG2Q9H7P9 1386 aa15.3■□□□□ 0.04
RPL13A-205ENST00000474171 ATG3Q9NT62 314 aa15.3■□□□□ 0.04
RPL13A-205ENST00000474171 KDRP35968 1356 aa15.29■□□□□ 0.04
RPL13A-205ENST00000474171 MAP3K5Q99683 1374 aa15.29■□□□□ 0.04
RPL13A-205ENST00000474171 LOC102724428A0A0B4J2F2 783 aa15.29■□□□□ 0.04
RPL13A-205ENST00000474171 MTHFSP49914 203 aa15.29■□□□□ 0.04
RPL13A-205ENST00000474171 SIK1P57059 783 aa15.29■□□□□ 0.04
RPL13A-205ENST00000474171 CNGB1Q14028 1251 aaPredicted RBP15.29■□□□□ 0.04
RPL13A-205ENST00000474171 ZNF530Q6P9A1 599 aaPredicted RBP15.29■□□□□ 0.04
RPL13A-205ENST00000474171 MYH14Q7Z406 1995 aaKnown RBP15.29■□□□□ 0.04
RPL13A-205ENST00000474171 ZNF831Q5JPB2 1677 aa15.28■□□□□ 0.04
RPL13A-205ENST00000474171 YY1P25490 414 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms