RNA–Protein interactions for RNA: ENST00000473894.1

RAB4A-202, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB4A, Length 708 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-202ENST00000473894 U2AF1L5P0DN76 240 aaPredicted RBP23.66■■□□□ 1.38
RAB4A-202ENST00000473894 U2AF1Q01081 240 aaKnown RBP eCLIP23.66■■□□□ 1.38
RAB4A-202ENST00000473894 RAPGEF4Q8WZA2 1011 aa23.66■■□□□ 1.38
RAB4A-202ENST00000473894 RSPH6AQ9H0K4 717 aa23.66■■□□□ 1.38
RAB4A-202ENST00000473894 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.66■■□□□ 1.386e-9■■■■■ 40
RAB4A-202ENST00000473894 SRCAPQ6ZRS2 3230 aa23.64■■□□□ 1.38
RAB4A-202ENST00000473894 TNS2Q63HR2 1409 aa23.64■■□□□ 1.37
RAB4A-202ENST00000473894 SHANK3Q9BYB0 1731 aa23.64■■□□□ 1.37
RAB4A-202ENST00000473894 HMOX1P09601 288 aa23.63■■□□□ 1.37
RAB4A-202ENST00000473894 TATP17735 454 aaPredicted RBP23.63■■□□□ 1.37
RAB4A-202ENST00000473894 SEPT12Q8IYM1 358 aa23.63■■□□□ 1.37
RAB4A-202ENST00000473894 WDR43Q15061 677 aaKnown RBP eCLIP23.62■■□□□ 1.37
RAB4A-202ENST00000473894 PLEKHF1Q96S99 279 aa23.61■■□□□ 1.37
RAB4A-202ENST00000473894 ADAMTS8Q9UP79 889 aa23.61■■□□□ 1.37
RAB4A-202ENST00000473894 BRWD3Q6RI45 1802 aa23.61■■□□□ 1.37
RAB4A-202ENST00000473894 PNNQ9H307 717 aaKnown RBP23.6■■□□□ 1.37
RAB4A-202ENST00000473894 EXOC5O00471 708 aa23.59■■□□□ 1.37
RAB4A-202ENST00000473894 DDB1Q16531 1140 aa23.59■■□□□ 1.37
RAB4A-202ENST00000473894 AMOTQ4VCS5 1084 aa23.59■■□□□ 1.37
RAB4A-202ENST00000473894 ZCRB1Q8TBF4 217 aaKnown RBP23.59■■□□□ 1.37
RAB4A-202ENST00000473894 PRKAR2BP31323 418 aa23.58■■□□□ 1.37
RAB4A-202ENST00000473894 SPG7Q9UQ90 795 aa23.57■■□□□ 1.36
RAB4A-202ENST00000473894 PLEKHO1Q53GL0 409 aaPredicted RBP23.56■■□□□ 1.36
RAB4A-202ENST00000473894 BCL9O00512 1426 aa23.56■■□□□ 1.36
RAB4A-202ENST00000473894 PCDH11XQ9BZA7 1347 aa23.55■■□□□ 1.36
RAB4A-202ENST00000473894 PCDH11YQ9BZA8 1340 aa23.55■■□□□ 1.36
RAB4A-202ENST00000473894 PHACTR3Q96KR7 559 aa23.54■■□□□ 1.36
RAB4A-202ENST00000473894 CCDC125Q86Z20 511 aa23.53■■□□□ 1.36
RAB4A-202ENST00000473894 A0A0G2JS52 829 aa23.52■■□□□ 1.36
RAB4A-202ENST00000473894 CYP27B1O15528 508 aa23.52■■□□□ 1.36
RAB4A-202ENST00000473894 MYT1Q01538 1121 aa23.52■■□□□ 1.36
RAB4A-202ENST00000473894 PDE3BQ13370 1112 aa23.52■■□□□ 1.36
RAB4A-202ENST00000473894 NKX1-1Q15270 411 aaPredicted RBP23.52■■□□□ 1.36
RAB4A-202ENST00000473894 MTHFSDQ2M296 383 aaKnown RBP23.52■■□□□ 1.36
RAB4A-202ENST00000473894 KRT27Q7Z3Y8 459 aa23.52■■□□□ 1.36
RAB4A-202ENST00000473894 MARCH10Q8NA82 808 aaPredicted RBP23.52■■□□□ 1.36
RAB4A-202ENST00000473894 RUNDC1Q96C34 613 aa23.52■■□□□ 1.36
RAB4A-202ENST00000473894 GAS2L2Q8NHY3 880 aa23.51■■□□□ 1.35
RAB4A-202ENST00000473894 ADAMTS7Q9UKP4 1686 aa23.49■■□□□ 1.35
RAB4A-202ENST00000473894 PHKG2P15735 406 aa23.49■■□□□ 1.35
RAB4A-202ENST00000473894 IFNL2Q8IZJ0 200 aa23.49■■□□□ 1.35
RAB4A-202ENST00000473894 EP400Q96L91 3159 aa23.48■■□□□ 1.35
RAB4A-202ENST00000473894 NEFMP07197 916 aa23.48■■□□□ 1.35
RAB4A-202ENST00000473894 AKAP4Q5JQC9 854 aa23.48■■□□□ 1.35
RAB4A-202ENST00000473894 ZNF530Q6P9A1 599 aaPredicted RBP23.48■■□□□ 1.35
RAB4A-202ENST00000473894 MAPK8IP3Q9UPT6 1336 aa23.47■■□□□ 1.35
RAB4A-202ENST00000473894 HSP90AB1P08238 724 aaKnown RBP23.46■■□□□ 1.35
RAB4A-202ENST00000473894 DDX54Q8TDD1 881 aaKnown RBP23.46■■□□□ 1.35
RAB4A-202ENST00000473894 DLG5Q8TDM6 1919 aa23.45■■□□□ 1.35
RAB4A-202ENST00000473894 NFE2L2Q16236 605 aa23.45■■□□□ 1.34
RAB4A-202ENST00000473894 NCBP3Q53F19 620 aaKnown RBP23.45■■□□□ 1.34
RAB4A-202ENST00000473894 CCDC146Q8IYE0 955 aa23.45■■□□□ 1.34
RAB4A-202ENST00000473894 FAM9BQ8IZU0 186 aa23.45■■□□□ 1.34
RAB4A-202ENST00000473894 HTATSF1O43719 755 aaKnown RBP23.44■■□□□ 1.34
RAB4A-202ENST00000473894 C1orf141Q5JVX7 400 aa23.44■■□□□ 1.34
RAB4A-202ENST00000473894 FAM196AQ6ZSG2 479 aa23.44■■□□□ 1.34
RAB4A-202ENST00000473894 SBF2Q86WG5 1849 aa23.44■■□□□ 1.34
RAB4A-202ENST00000473894 SCN11AQ9UI33 1791 aa23.44■■□□□ 1.34
RAB4A-202ENST00000473894 MAP3K5Q99683 1374 aa23.43■■□□□ 1.34
RAB4A-202ENST00000473894 TMPOP42166 694 aaKnown RBP23.43■■□□□ 1.34
RAB4A-202ENST00000473894 KDM6AO15550 1401 aaPredicted RBP23.42■■□□□ 1.34
RAB4A-202ENST00000473894 DCAF5Q96JK2 942 aa23.42■■□□□ 1.34
RAB4A-202ENST00000473894 VIRMAQ69YN4 1812 aaKnown RBP23.42■■□□□ 1.34
RAB4A-202ENST00000473894 TOGARAM1Q9Y4F4 1720 aa23.42■■□□□ 1.34
RAB4A-202ENST00000473894 GNAT3A8MTJ3 354 aa23.41■■□□□ 1.34
RAB4A-202ENST00000473894 CEMIPQ8WUJ3 1361 aa23.4■■□□□ 1.34
RAB4A-202ENST00000473894 DOT1LQ8TEK3 1739 aa23.39■■□□□ 1.34
RAB4A-202ENST00000473894 NHSQ6T4R5 1651 aa23.39■■□□□ 1.34
RAB4A-202ENST00000473894 MRC1P22897 1456 aa23.39■■□□□ 1.34
RAB4A-202ENST00000473894 APAF1O14727 1248 aa23.39■■□□□ 1.33
RAB4A-202ENST00000473894 FAM182BQ5T319 152 aa23.38■■□□□ 1.33
RAB4A-202ENST00000473894 ERVV-2B6SEH9 535 aa23.37■■□□□ 1.33
RAB4A-202ENST00000473894 RIPK4P57078 832 aa23.37■■□□□ 1.33
RAB4A-202ENST00000473894 NGEFQ8N5V2 710 aa23.37■■□□□ 1.33
RAB4A-202ENST00000473894 ITGB4P16144 1822 aa23.37■■□□□ 1.33
RAB4A-202ENST00000473894 RNMTO43148 476 aaKnown RBP23.36■■□□□ 1.33
RAB4A-202ENST00000473894 MPRIPQ6WCQ1 1025 aa23.36■■□□□ 1.33
RAB4A-202ENST00000473894 IL17REQ8NFR9 667 aa23.36■■□□□ 1.33
RAB4A-202ENST00000473894 LMOD3Q0VAK6 560 aa23.35■■□□□ 1.33
RAB4A-202ENST00000473894 CCDC27Q2M243 656 aa23.35■■□□□ 1.33
RAB4A-202ENST00000473894 TRIM35Q9UPQ4 493 aa23.35■■□□□ 1.33
RAB4A-202ENST00000473894 LGR6Q9HBX8 967 aa23.34■■□□□ 1.33
RAB4A-202ENST00000473894 SIPA1L3O60292 1781 aaPredicted RBP23.34■■□□□ 1.33
RAB4A-202ENST00000473894 RTF1Q92541 710 aaKnown RBP23.33■■□□□ 1.33
RAB4A-202ENST00000473894 KAT6BQ8WYB5 2073 aa23.32■■□□□ 1.32
RAB4A-202ENST00000473894 BCL11BQ9C0K0 894 aaPredicted RBP23.32■■□□□ 1.32
RAB4A-202ENST00000473894 RRP7AQ9Y3A4 280 aaKnown RBP23.32■■□□□ 1.32
RAB4A-202ENST00000473894 PRIM1P49642 420 aaKnown RBP23.31■■□□□ 1.32
RAB4A-202ENST00000473894 SLC52A2Q9HAB3 445 aa23.31■■□□□ 1.32
RAB4A-202ENST00000473894 TNS1Q9HBL0 1735 aaKnown RBP23.3■■□□□ 1.32
RAB4A-202ENST00000473894 KCNQ2O43526 872 aa23.29■■□□□ 1.32
RAB4A-202ENST00000473894 MCM10Q7L590 875 aa23.29■■□□□ 1.32
RAB4A-202ENST00000473894 DEFB132Q7Z7B7 95 aa23.29■■□□□ 1.32
RAB4A-202ENST00000473894 BTAF1O14981 1849 aa23.29■■□□□ 1.32
RAB4A-202ENST00000473894 NEUROD2Q15784 382 aa23.28■■□□□ 1.32
RAB4A-202ENST00000473894 ACSBG1Q96GR2 724 aa23.28■■□□□ 1.32
RAB4A-202ENST00000473894 TRIM37O94972 964 aa23.27■■□□□ 1.32
RAB4A-202ENST00000473894 CABP4P57796 275 aa23.27■■□□□ 1.32
RAB4A-202ENST00000473894 SF3B2Q13435 895 aaKnown RBP23.27■■□□□ 1.32
RAB4A-202ENST00000473894 DCTN1Q14203 1278 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms