RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 CAMKK2Q96RR4 588 aa17.87■□□□□ 0.45
BRAT1-205ENST00000473879 COL3A1P02461 1466 aaPredicted RBP17.87■□□□□ 0.45
BRAT1-205ENST00000473879 NBPF6Q5VWK0 638 aa17.86■□□□□ 0.45
BRAT1-205ENST00000473879 NBPF4Q96M43 638 aa17.86■□□□□ 0.45
BRAT1-205ENST00000473879 SHANK3Q9BYB0 1731 aa17.86■□□□□ 0.45
BRAT1-205ENST00000473879 EZH2Q15910 746 aaKnown RBP17.85■□□□□ 0.45
BRAT1-205ENST00000473879 MORC1Q86VD1 984 aa17.85■□□□□ 0.45
BRAT1-205ENST00000473879 BCL11BQ9C0K0 894 aaPredicted RBP17.85■□□□□ 0.45
BRAT1-205ENST00000473879 PPM1GO15355 546 aaPredicted RBP17.83■□□□□ 0.44
BRAT1-205ENST00000473879 NUP188Q5SRE5 1749 aa17.83■□□□□ 0.44
BRAT1-205ENST00000473879 NHSQ6T4R5 1651 aa17.83■□□□□ 0.44
BRAT1-205ENST00000473879 PLEKHG2Q9H7P9 1386 aa17.82■□□□□ 0.44
BRAT1-205ENST00000473879 PLSCR1O15162 318 aa17.82■□□□□ 0.44
BRAT1-205ENST00000473879 TNNT2P45379 298 aaPredicted RBP17.82■□□□□ 0.44
BRAT1-205ENST00000473879 PKD1L3Q7Z443 1732 aa17.81■□□□□ 0.44
BRAT1-205ENST00000473879 MRS2Q9HD23 443 aa17.81■□□□□ 0.44
BRAT1-205ENST00000473879 MEGF6O75095 1541 aa17.81■□□□□ 0.44
BRAT1-205ENST00000473879 PPP2R1AP30153 589 aa17.8■□□□□ 0.44
BRAT1-205ENST00000473879 PTF1AQ7RTS3 328 aa17.8■□□□□ 0.44
BRAT1-205ENST00000473879 USHBP1Q8N6Y0 703 aa17.8■□□□□ 0.44
BRAT1-205ENST00000473879 ZCRB1Q8TBF4 217 aaKnown RBP17.8■□□□□ 0.44
BRAT1-205ENST00000473879 RAPGEF4Q8WZA2 1011 aa17.8■□□□□ 0.44
BRAT1-205ENST00000473879 DDX54Q8TDD1 881 aaKnown RBP17.79■□□□□ 0.44
BRAT1-205ENST00000473879 TATP17735 454 aaPredicted RBP17.78■□□□□ 0.44
BRAT1-205ENST00000473879 KDRP35968 1356 aa17.78■□□□□ 0.44
BRAT1-205ENST00000473879 IGSF1Q8N6C5 1336 aa17.77■□□□□ 0.44
BRAT1-205ENST00000473879 KCNQ2O43526 872 aa17.77■□□□□ 0.44
BRAT1-205ENST00000473879 EIF4A2Q14240 407 aaKnown RBP17.77■□□□□ 0.44
BRAT1-205ENST00000473879 DOT1LQ8TEK3 1739 aa17.76■□□□□ 0.43
BRAT1-205ENST00000473879 ACSBG1Q96GR2 724 aa17.76■□□□□ 0.43
BRAT1-205ENST00000473879 EYA1Q99502 592 aa17.76■□□□□ 0.43
BRAT1-205ENST00000473879 BTAF1O14981 1849 aa17.75■□□□□ 0.43
BRAT1-205ENST00000473879 IL13P35225 146 aa17.74■□□□□ 0.43
BRAT1-205ENST00000473879 PSDA5PKW4 1024 aaPredicted RBP17.73■□□□□ 0.43
BRAT1-205ENST00000473879 MTHFSP49914 203 aa17.73■□□□□ 0.43
BRAT1-205ENST00000473879 CCDC184Q52MB2 194 aa17.73■□□□□ 0.43
BRAT1-205ENST00000473879 NBPF14Q5TI25 921 aa17.73■□□□□ 0.43
BRAT1-205ENST00000473879 R3HDM1Q15032 1099 aaKnown RBP17.72■□□□□ 0.43
BRAT1-205ENST00000473879 PROM2Q8N271 834 aa17.72■□□□□ 0.43
BRAT1-205ENST00000473879 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
BRAT1-205ENST00000473879 PCDH11XQ9BZA7 1347 aa17.72■□□□□ 0.43
BRAT1-205ENST00000473879 PCDH11YQ9BZA8 1340 aa17.72■□□□□ 0.43
BRAT1-205ENST00000473879 LRP5O75197 1615 aa17.71■□□□□ 0.43
BRAT1-205ENST00000473879 TXNRD1Q16881 649 aa17.7■□□□□ 0.42
BRAT1-205ENST00000473879 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.7■□□□□ 0.42
BRAT1-205ENST00000473879 KAT6BQ8WYB5 2073 aa17.7■□□□□ 0.42
BRAT1-205ENST00000473879 PRIM1P49642 420 aaKnown RBP17.69■□□□□ 0.42
BRAT1-205ENST00000473879 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
BRAT1-205ENST00000473879 CYP27B1O15528 508 aa17.68■□□□□ 0.42
BRAT1-205ENST00000473879 TOGARAM1Q9Y4F4 1720 aa17.67■□□□□ 0.42
BRAT1-205ENST00000473879 PNISRQ8TF01 805 aaKnown RBP17.67■□□□□ 0.42
BRAT1-205ENST00000473879 SYTL4Q96C24 671 aaPredicted RBP17.67■□□□□ 0.42
BRAT1-205ENST00000473879 NKX1-1Q15270 411 aaPredicted RBP17.66■□□□□ 0.42
BRAT1-205ENST00000473879 FAM9BQ8IZU0 186 aa17.66■□□□□ 0.42
BRAT1-205ENST00000473879 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
BRAT1-205ENST00000473879 ADAMTS7Q9UKP4 1686 aa17.65■□□□□ 0.42
BRAT1-205ENST00000473879 WDR43Q15061 677 aaKnown RBP eCLIP17.65■□□□□ 0.42
BRAT1-205ENST00000473879 LY75O60449 1722 aa17.64■□□□□ 0.41
BRAT1-205ENST00000473879 ANO8Q9HCE9 1232 aaPredicted RBP17.64■□□□□ 0.41
BRAT1-205ENST00000473879 SLC27A3Q5K4L6 730 aa17.63■□□□□ 0.41
BRAT1-205ENST00000473879 AEBP1Q8IUX7 1158 aa17.63■□□□□ 0.41
BRAT1-205ENST00000473879 IFNL2Q8IZJ0 200 aa17.63■□□□□ 0.41
BRAT1-205ENST00000473879 ITGB4P16144 1822 aa17.63■□□□□ 0.41
BRAT1-205ENST00000473879 DIAPH1O60610 1272 aaKnown RBP17.62■□□□□ 0.41
BRAT1-205ENST00000473879 PHKG2P15735 406 aa17.62■□□□□ 0.41
BRAT1-205ENST00000473879 YTHDC1Q96MU7 727 aaKnown RBP17.62■□□□□ 0.41
BRAT1-205ENST00000473879 CASZ1Q86V15 1759 aa17.61■□□□□ 0.41
BRAT1-205ENST00000473879 SLC15A2Q16348 729 aa17.61■□□□□ 0.41
BRAT1-205ENST00000473879 AMOTQ4VCS5 1084 aa17.61■□□□□ 0.41
BRAT1-205ENST00000473879 PLEKHO1Q53GL0 409 aaPredicted RBP17.61■□□□□ 0.41
BRAT1-205ENST00000473879 SULT6B1Q6IMI4 303 aa17.61■□□□□ 0.41
BRAT1-205ENST00000473879 LRRC4BQ9NT99 713 aa17.61■□□□□ 0.41
BRAT1-205ENST00000473879 STK32BQ9NY57 414 aa17.61■□□□□ 0.41
BRAT1-205ENST00000473879 NUDCQ9Y266 331 aa17.6■□□□□ 0.41
BRAT1-205ENST00000473879 MPRIPQ6WCQ1 1025 aa17.58■□□□□ 0.4
BRAT1-205ENST00000473879 HSP90AB1P08238 724 aaKnown RBP17.57■□□□□ 0.4
BRAT1-205ENST00000473879 QSER1Q2KHR3 1735 aa17.57■□□□□ 0.4
BRAT1-205ENST00000473879 PIGBQ92521 554 aa17.56■□□□□ 0.4
BRAT1-205ENST00000473879 SMARCC1Q92922 1105 aaPredicted RBP17.56■□□□□ 0.4
BRAT1-205ENST00000473879 TUBGCP6Q96RT7 1819 aa17.56■□□□□ 0.4
BRAT1-205ENST00000473879 MRC1P22897 1456 aa17.56■□□□□ 0.4
BRAT1-205ENST00000473879 SCN11AQ9UI33 1791 aa17.56■□□□□ 0.4
BRAT1-205ENST00000473879 KDM6AO15550 1401 aaPredicted RBP17.55■□□□□ 0.4
BRAT1-205ENST00000473879 ZNF530Q6P9A1 599 aaPredicted RBP17.55■□□□□ 0.4
BRAT1-205ENST00000473879 AKT1S1Q96B36 256 aa17.55■□□□□ 0.4
BRAT1-205ENST00000473879 DCAF5Q96JK2 942 aa17.55■□□□□ 0.4
BRAT1-205ENST00000473879 RSPH6AQ9H0K4 717 aa17.55■□□□□ 0.4
BRAT1-205ENST00000473879 CCNL1Q9UK58 526 aaPredicted RBP17.55■□□□□ 0.4
BRAT1-205ENST00000473879 ADAMTS8Q9UP79 889 aa17.55■□□□□ 0.4
BRAT1-205ENST00000473879 VIRMAQ69YN4 1812 aaKnown RBP17.54■□□□□ 0.4
BRAT1-205ENST00000473879 ERVV-2B6SEH9 535 aa17.54■□□□□ 0.4
BRAT1-205ENST00000473879 HMGB2P26583 209 aaKnown RBP17.54■□□□□ 0.4
BRAT1-205ENST00000473879 HNRNPUQ00839 825 aaKnown RBP eCLIP17.54■□□□□ 0.4
BRAT1-205ENST00000473879 ZNF827Q17R98 1081 aa17.54■□□□□ 0.4
BRAT1-205ENST00000473879 SPON1Q9HCB6 807 aa17.54■□□□□ 0.4
BRAT1-205ENST00000473879 TMOD3Q9NYL9 352 aa17.54■□□□□ 0.4
BRAT1-205ENST00000473879 C5P01031 1676 aa17.54■□□□□ 0.4
BRAT1-205ENST00000473879 PALLDQ8WX93 1383 aa17.53■□□□□ 0.4
BRAT1-205ENST00000473879 HMOX1P09601 288 aa17.53■□□□□ 0.4
BRAT1-205ENST00000473879 KCNQ4P56696 695 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms