RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 CCDC27Q2M243 656 aa14.09□□□□□ -0.15
SP140-208ENST00000473711 NBPF6Q5VWK0 638 aa14.09□□□□□ -0.15
SP140-208ENST00000473711 NBPF4Q96M43 638 aa14.09□□□□□ -0.15
SP140-208ENST00000473711 CREBZFQ9NS37 354 aa14.09□□□□□ -0.15
SP140-208ENST00000473711 PRDM11Q9NQV5 511 aa14.08□□□□□ -0.16
SP140-208ENST00000473711 TRIM35Q9UPQ4 493 aa14.08□□□□□ -0.16
SP140-208ENST00000473711 CPDO75976 1380 aa14.08□□□□□ -0.16
SP140-208ENST00000473711 AHDC1Q5TGY3 1603 aaPredicted RBP14.08□□□□□ -0.16
SP140-208ENST00000473711 PHRF1Q9P1Y6 1649 aaKnown RBP14.08□□□□□ -0.16
SP140-208ENST00000473711 SLFN5Q08AF3 891 aa14.07□□□□□ -0.16
SP140-208ENST00000473711 WDR63Q8IWG1 891 aa14.07□□□□□ -0.16
SP140-208ENST00000473711 RGPD1P0DJD0 1748 aa14.06□□□□□ -0.16
SP140-208ENST00000473711 CRYBG1Q9Y4K1 1723 aa14.05□□□□□ -0.16
SP140-208ENST00000473711 E9PSI1 815 aa14.05□□□□□ -0.16
SP140-208ENST00000473711 CSB-PGBD3P0DP91 1061 aa14.05□□□□□ -0.16
SP140-208ENST00000473711 SUPT16HQ9Y5B9 1047 aaKnown RBP14.05□□□□□ -0.16
SP140-208ENST00000473711 KDRP35968 1356 aa14.05□□□□□ -0.16
SP140-208ENST00000473711 FAM83GA6ND36 823 aa14.04□□□□□ -0.16
SP140-208ENST00000473711 MTHFSDQ2M296 383 aaKnown RBP14.04□□□□□ -0.16
SP140-208ENST00000473711 DUSP27Q5VZP5 1158 aa14.04□□□□□ -0.16
SP140-208ENST00000473711 TRMT2AQ8IZ69 625 aaKnown RBP14.04□□□□□ -0.16
SP140-208ENST00000473711 NLRP2Q9NX02 1062 aa14.04□□□□□ -0.16
SP140-208ENST00000473711 ERBB3P21860 1342 aa14.03□□□□□ -0.16
SP140-208ENST00000473711 PHLPP1O60346 1717 aa14.03□□□□□ -0.16
SP140-208ENST00000473711 COL18A1P39060 1754 aa14.02□□□□□ -0.16
SP140-208ENST00000473711 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.17
SP140-208ENST00000473711 RGPD5Q99666 1765 aa14.01□□□□□ -0.17
SP140-208ENST00000473711 NUTM2BA6NNL0 878 aaPredicted RBP14.01□□□□□ -0.17
SP140-208ENST00000473711 NUTM2EB1AL46 878 aaPredicted RBP14.01□□□□□ -0.17
SP140-208ENST00000473711 CD44P16070 742 aaKnown RBP14.01□□□□□ -0.17
SP140-208ENST00000473711 EVA1CP58658 441 aa14.01□□□□□ -0.17
SP140-208ENST00000473711 LMOD3Q0VAK6 560 aa14.01□□□□□ -0.17
SP140-208ENST00000473711 DCTN1Q14203 1278 aa14.01□□□□□ -0.17
SP140-208ENST00000473711 NUTM2AQ8IVF1 878 aaPredicted RBP14.01□□□□□ -0.17
SP140-208ENST00000473711 GAS2L2Q8NHY3 880 aa14.01□□□□□ -0.17
SP140-208ENST00000473711 THUMPD2Q9BTF0 503 aaKnown RBP14.01□□□□□ -0.17
SP140-208ENST00000473711 PELP1Q8IZL8 1130 aaKnown RBP14□□□□□ -0.17
SP140-208ENST00000473711 STRN4Q9NRL3 753 aa14□□□□□ -0.17
SP140-208ENST00000473711 COL16A1Q07092 1604 aaPredicted RBP14□□□□□ -0.17
SP140-208ENST00000473711 RGPD2P0DJD1 1756 aa13.99□□□□□ -0.17
SP140-208ENST00000473711 CAMTA1Q9Y6Y1 1673 aa13.99□□□□□ -0.17
SP140-208ENST00000473711 ADAMTS2O95450 1211 aa13.99□□□□□ -0.17
SP140-208ENST00000473711 PLEKHO1Q53GL0 409 aaPredicted RBP13.99□□□□□ -0.17
SP140-208ENST00000473711 TOM1L2Q6ZVM7 507 aa13.99□□□□□ -0.17
SP140-208ENST00000473711 MYH16Q9H6N6 1097 aa13.99□□□□□ -0.17
SP140-208ENST00000473711 RCAN3Q9UKA8 241 aa13.99□□□□□ -0.17
SP140-208ENST00000473711 LAS1LQ9Y4W2 734 aaKnown RBP13.99□□□□□ -0.17
SP140-208ENST00000473711 ABCA3Q99758 1704 aa13.98□□□□□ -0.17
SP140-208ENST00000473711 IL16Q14005 1332 aa13.98□□□□□ -0.17
SP140-208ENST00000473711 CALD1Q05682 793 aaKnown RBP13.98□□□□□ -0.17
SP140-208ENST00000473711 MCM10Q7L590 875 aa13.98□□□□□ -0.17
SP140-208ENST00000473711 BTG4Q9NY30 223 aa13.98□□□□□ -0.17
SP140-208ENST00000473711 ABCC6O95255 1503 aa13.98□□□□□ -0.17
SP140-208ENST00000473711 WDR17Q8IZU2 1322 aa13.97□□□□□ -0.17
SP140-208ENST00000473711 HSPA1LP34931 641 aa13.97□□□□□ -0.17
SP140-208ENST00000473711 LARP1Q6PKG0 1096 aaKnown RBP13.97□□□□□ -0.17
SP140-208ENST00000473711 RAPGEF4Q8WZA2 1011 aa13.97□□□□□ -0.17
SP140-208ENST00000473711 RTF1Q92541 710 aaKnown RBP13.97□□□□□ -0.17
SP140-208ENST00000473711 NCAPD2Q15021 1401 aa13.97□□□□□ -0.17
SP140-208ENST00000473711 COL22A1Q8NFW1 1626 aaPredicted RBP13.97□□□□□ -0.17
SP140-208ENST00000473711 GNAT3A8MTJ3 354 aa13.96□□□□□ -0.17
SP140-208ENST00000473711 TATP17735 454 aaPredicted RBP13.96□□□□□ -0.17
SP140-208ENST00000473711 AMOTQ4VCS5 1084 aa13.96□□□□□ -0.17
SP140-208ENST00000473711 TSR2Q969E8 191 aaKnown RBP13.96□□□□□ -0.17
SP140-208ENST00000473711 COL5A2P05997 1499 aaPredicted RBP13.95□□□□□ -0.18
SP140-208ENST00000473711 HTATSF1O43719 755 aaKnown RBP13.95□□□□□ -0.18
SP140-208ENST00000473711 NEFLP07196 543 aa13.95□□□□□ -0.18
SP140-208ENST00000473711 GNAI1P63096 354 aa13.95□□□□□ -0.18
SP140-208ENST00000473711 ZNF530Q6P9A1 599 aaPredicted RBP13.95□□□□□ -0.18
SP140-208ENST00000473711 JCADQ9P266 1359 aa13.95□□□□□ -0.18
SP140-208ENST00000473711 LMO7Q8WWI1 1683 aa13.95□□□□□ -0.18
SP140-208ENST00000473711 FANCIQ9NVI1 1328 aa13.94□□□□□ -0.18
SP140-208ENST00000473711 CARD10Q9BWT7 1032 aa13.94□□□□□ -0.18
SP140-208ENST00000473711 IFT57Q9NWB7 429 aa13.94□□□□□ -0.18
SP140-208ENST00000473711 DLG5Q8TDM6 1919 aa13.94□□□□□ -0.18
SP140-208ENST00000473711 ZNF853P0CG23 659 aa13.93□□□□□ -0.18
SP140-208ENST00000473711 IRX6P78412 446 aaPredicted RBP13.93□□□□□ -0.18
SP140-208ENST00000473711 EXOSC9Q06265 439 aaKnown RBP13.93□□□□□ -0.18
SP140-208ENST00000473711 FKBP8Q14318 412 aa13.93□□□□□ -0.18
SP140-208ENST00000473711 IL17REQ8NFR9 667 aa13.93□□□□□ -0.18
SP140-208ENST00000473711 CFAP44Q96MT7 982 aa13.93□□□□□ -0.18
SP140-208ENST00000473711 MAP3K5Q99683 1374 aa13.93□□□□□ -0.18
SP140-208ENST00000473711 AKAP4Q5JQC9 854 aa13.92□□□□□ -0.18
SP140-208ENST00000473711 C1orf141Q5JVX7 400 aa13.92□□□□□ -0.18
SP140-208ENST00000473711 MBIPQ9NS73 344 aa13.92□□□□□ -0.18
SP140-208ENST00000473711 USP35Q9P2H5 1018 aa13.92□□□□□ -0.18
SP140-208ENST00000473711 SPG7Q9UQ90 795 aa13.92□□□□□ -0.18
SP140-208ENST00000473711 GABBR2O75899 941 aa13.91□□□□□ -0.18
SP140-208ENST00000473711 MPRIPQ6WCQ1 1025 aa13.91□□□□□ -0.18
SP140-208ENST00000473711 LGR6Q9HBX8 967 aa13.91□□□□□ -0.18
SP140-208ENST00000473711 MIS18AQ9NYP9 233 aa13.91□□□□□ -0.18
SP140-208ENST00000473711 COL14A1Q05707 1796 aaKnown RBP13.91□□□□□ -0.18
SP140-208ENST00000473711 RNF123Q5XPI4 1314 aa13.9□□□□□ -0.18
SP140-208ENST00000473711 CRB1P82279 1406 aa13.9□□□□□ -0.18
SP140-208ENST00000473711 MEGF6O75095 1541 aa13.9□□□□□ -0.18
SP140-208ENST00000473711 CHL1O00533 1208 aa13.9□□□□□ -0.18
SP140-208ENST00000473711 IL2RBP14784 551 aa13.9□□□□□ -0.18
SP140-208ENST00000473711 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.9□□□□□ -0.18
SP140-208ENST00000473711 FAM208AQ9UK61 1670 aaKnown RBP13.9□□□□□ -0.18
SP140-208ENST00000473711 RNMTO43148 476 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms