RNA–Protein interactions for RNA: ENST00000473645.6

PDCD10-208, Transcript of programmed cell death 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD10, Length 1,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-208ENST00000473645 ERBB3P21860 1342 aa13.76□□□□□ -0.21
PDCD10-208ENST00000473645 TXNRD1Q16881 649 aa13.75□□□□□ -0.21
PDCD10-208ENST00000473645 PPP1R1BQ9UD71 204 aaPredicted RBP13.75□□□□□ -0.21
PDCD10-208ENST00000473645 IL2RBP14784 551 aa13.74□□□□□ -0.21
PDCD10-208ENST00000473645 ANKRD24Q8TF21 1146 aa13.74□□□□□ -0.21
PDCD10-208ENST00000473645 PDGFDQ9GZP0 370 aaPredicted RBP13.74□□□□□ -0.21
PDCD10-208ENST00000473645 EDC4Q6P2E9 1401 aaKnown RBP13.74□□□□□ -0.21
PDCD10-208ENST00000473645 USP54Q70EL1 1684 aa13.74□□□□□ -0.21
PDCD10-208ENST00000473645 TESK2Q96S53 571 aa13.73□□□□□ -0.21
PDCD10-208ENST00000473645 A0A1W2PP64 1363 aa13.73□□□□□ -0.21
PDCD10-208ENST00000473645 TNS2Q63HR2 1409 aa13.72□□□□□ -0.21
PDCD10-208ENST00000473645 ST20-MTHFSA0A0A6YYL1 179 aa13.71□□□□□ -0.21
PDCD10-208ENST00000473645 IP6K1Q92551 441 aa13.71□□□□□ -0.21
PDCD10-208ENST00000473645 ACSBG1Q96GR2 724 aa13.71□□□□□ -0.21
PDCD10-208ENST00000473645 STK32BQ9NY57 414 aa13.71□□□□□ -0.21
PDCD10-208ENST00000473645 LTN1O94822 1766 aa13.71□□□□□ -0.22
PDCD10-208ENST00000473645 NINLQ9Y2I6 1382 aa13.71□□□□□ -0.22
PDCD10-208ENST00000473645 SLC24A1O60721 1099 aa13.71□□□□□ -0.22
PDCD10-208ENST00000473645 ZBTB7AO95365 584 aa13.71□□□□□ -0.22
PDCD10-208ENST00000473645 SLC15A2Q16348 729 aa13.71□□□□□ -0.22
PDCD10-208ENST00000473645 KAT6BQ8WYB5 2073 aa13.7□□□□□ -0.22
PDCD10-208ENST00000473645 CASZ1Q86V15 1759 aa13.69□□□□□ -0.22
PDCD10-208ENST00000473645 PTGER2P43116 358 aa13.69□□□□□ -0.22
PDCD10-208ENST00000473645 FKBP8Q14318 412 aa13.69□□□□□ -0.22
PDCD10-208ENST00000473645 YY1P25490 414 aa13.68□□□□□ -0.22
PDCD10-208ENST00000473645 LTV1Q96GA3 475 aaPredicted RBP13.68□□□□□ -0.22
PDCD10-208ENST00000473645 COG3Q96JB2 828 aa13.68□□□□□ -0.22
PDCD10-208ENST00000473645 FBLN1P23142 703 aa13.67□□□□□ -0.22
PDCD10-208ENST00000473645 DDX54Q8TDD1 881 aaKnown RBP13.67□□□□□ -0.22
PDCD10-208ENST00000473645 NHSQ6T4R5 1651 aa13.67□□□□□ -0.22
PDCD10-208ENST00000473645 MAP3K19Q56UN5 1328 aa13.66□□□□□ -0.22
PDCD10-208ENST00000473645 CD44P16070 742 aaKnown RBP13.66□□□□□ -0.22
PDCD10-208ENST00000473645 HOXC9P31274 260 aa13.65□□□□□ -0.22
PDCD10-208ENST00000473645 AMPHP49418 695 aa13.65□□□□□ -0.22
PDCD10-208ENST00000473645 MTFR1LQ9H019 292 aa13.65□□□□□ -0.22
PDCD10-208ENST00000473645 LRRC4BQ9NT99 713 aa13.64□□□□□ -0.23
PDCD10-208ENST00000473645 FYB1O15117 783 aa13.63□□□□□ -0.23
PDCD10-208ENST00000473645 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
PDCD10-208ENST00000473645 SGIP1Q9BQI5 828 aa13.63□□□□□ -0.23
PDCD10-208ENST00000473645 SYT17Q9BSW7 474 aa13.63□□□□□ -0.23
PDCD10-208ENST00000473645 BTAF1O14981 1849 aa13.63□□□□□ -0.23
PDCD10-208ENST00000473645 ANKRD36BQ8N2N9 1353 aa13.63□□□□□ -0.23
PDCD10-208ENST00000473645 TMF1P82094 1093 aa13.62□□□□□ -0.23
PDCD10-208ENST00000473645 FHDC1Q9C0D6 1143 aaPredicted RBP13.62□□□□□ -0.23
PDCD10-208ENST00000473645 PRIM1P49642 420 aaKnown RBP13.61□□□□□ -0.23
PDCD10-208ENST00000473645 ZNF827Q17R98 1081 aa13.61□□□□□ -0.23
PDCD10-208ENST00000473645 SLC27A3Q5K4L6 730 aa13.61□□□□□ -0.23
PDCD10-208ENST00000473645 ZCRB1Q8TBF4 217 aaKnown RBP13.61□□□□□ -0.23
PDCD10-208ENST00000473645 GGNBP2Q9H3C7 697 aa13.61□□□□□ -0.23
PDCD10-208ENST00000473645 RRS1Q15050 365 aaKnown RBP13.6□□□□□ -0.23
PDCD10-208ENST00000473645 NBPF6Q5VWK0 638 aa13.6□□□□□ -0.23
PDCD10-208ENST00000473645 SYTL4Q96C24 671 aaPredicted RBP13.6□□□□□ -0.23
PDCD10-208ENST00000473645 NBPF4Q96M43 638 aa13.6□□□□□ -0.23
PDCD10-208ENST00000473645 MYOM1P52179 1685 aa13.6□□□□□ -0.23
PDCD10-208ENST00000473645 FAM208AQ9UK61 1670 aaKnown RBP13.6□□□□□ -0.23
PDCD10-208ENST00000473645 USP47Q96K76 1375 aa13.59□□□□□ -0.23
PDCD10-208ENST00000473645 ARXQ96QS3 562 aa13.59□□□□□ -0.23
PDCD10-208ENST00000473645 PAPPAQ13219 1627 aa13.59□□□□□ -0.23
PDCD10-208ENST00000473645 GABBR2O75899 941 aa13.58□□□□□ -0.23
PDCD10-208ENST00000473645 CDCA8Q53HL2 280 aa13.58□□□□□ -0.23
PDCD10-208ENST00000473645 RGPD2P0DJD1 1756 aa13.58□□□□□ -0.24
PDCD10-208ENST00000473645 RTL1A6NKG5 1358 aa13.58□□□□□ -0.24
PDCD10-208ENST00000473645 KCNQ4P56696 695 aa13.58□□□□□ -0.24
PDCD10-208ENST00000473645 SLC16A10Q8TF71 515 aa13.58□□□□□ -0.24
PDCD10-208ENST00000473645 CGNL1Q0VF96 1302 aa13.57□□□□□ -0.24
PDCD10-208ENST00000473645 MEGF6O75095 1541 aa13.57□□□□□ -0.24
PDCD10-208ENST00000473645 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
PDCD10-208ENST00000473645 USHBP1Q8N6Y0 703 aa13.56□□□□□ -0.24
PDCD10-208ENST00000473645 RAPGEF4Q8WZA2 1011 aa13.56□□□□□ -0.24
PDCD10-208ENST00000473645 CARD14Q9BXL6 1004 aa13.56□□□□□ -0.24
PDCD10-208ENST00000473645 TFCP2L1Q9NZI6 479 aa13.56□□□□□ -0.24
PDCD10-208ENST00000473645 PNPLA7Q6ZV29 1317 aa13.55□□□□□ -0.24
PDCD10-208ENST00000473645 NSD2O96028 1365 aa13.55□□□□□ -0.24
PDCD10-208ENST00000473645 INSRP06213 1382 aa13.54□□□□□ -0.24
PDCD10-208ENST00000473645 MAP3K5Q99683 1374 aa13.54□□□□□ -0.24
PDCD10-208ENST00000473645 TATP17735 454 aaPredicted RBP13.54□□□□□ -0.24
PDCD10-208ENST00000473645 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
PDCD10-208ENST00000473645 SHANK3Q9BYB0 1731 aa13.54□□□□□ -0.24
PDCD10-208ENST00000473645 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
PDCD10-208ENST00000473645 TIMELESSQ9UNS1 1208 aa13.53□□□□□ -0.24
PDCD10-208ENST00000473645 FLT4P35916 1363 aa13.53□□□□□ -0.24
PDCD10-208ENST00000473645 KIF24Q5T7B8 1368 aa13.53□□□□□ -0.24
PDCD10-208ENST00000473645 DOT1LQ8TEK3 1739 aa13.52□□□□□ -0.24
PDCD10-208ENST00000473645 POLD1P28340 1107 aa13.52□□□□□ -0.25
PDCD10-208ENST00000473645 LY75O60449 1722 aa13.52□□□□□ -0.25
PDCD10-208ENST00000473645 QSER1Q2KHR3 1735 aa13.52□□□□□ -0.25
PDCD10-208ENST00000473645 ZNF784Q8NCA9 323 aaPredicted RBP13.51□□□□□ -0.25
PDCD10-208ENST00000473645 COL23A1Q86Y22 540 aaPredicted RBP13.5□□□□□ -0.25
PDCD10-208ENST00000473645 EMILIN1Q9Y6C2 1016 aa13.5□□□□□ -0.25
PDCD10-208ENST00000473645 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
PDCD10-208ENST00000473645 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
PDCD10-208ENST00000473645 CYP27B1O15528 508 aa13.49□□□□□ -0.25
PDCD10-208ENST00000473645 GPR162Q16538 588 aa13.49□□□□□ -0.25
PDCD10-208ENST00000473645 KIF20BQ96Q89 1820 aa13.49□□□□□ -0.25
PDCD10-208ENST00000473645 PPM1GO15355 546 aaPredicted RBP13.48□□□□□ -0.25
PDCD10-208ENST00000473645 HMGB2P26583 209 aaKnown RBP13.48□□□□□ -0.25
PDCD10-208ENST00000473645 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
PDCD10-208ENST00000473645 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
PDCD10-208ENST00000473645 ZNF579Q8NAF0 562 aaKnown RBP13.48□□□□□ -0.25
PDCD10-208ENST00000473645 NSD3Q9BZ95 1437 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms