RNA–Protein interactions for RNA: ENST00000473221.5

APTX-217, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-217ENST00000473221 KIAA0232Q92628 1395 aa13.12□□□□□ -0.31
APTX-217ENST00000473221 RRP1P56182 461 aaKnown RBP13.12□□□□□ -0.31
APTX-217ENST00000473221 GNAI1P63096 354 aa13.12□□□□□ -0.31
APTX-217ENST00000473221 MTHFSDQ2M296 383 aaKnown RBP13.12□□□□□ -0.31
APTX-217ENST00000473221 IFT57Q9NWB7 429 aa13.12□□□□□ -0.31
APTX-217ENST00000473221 ZNF853P0CG23 659 aa13.11□□□□□ -0.31
APTX-217ENST00000473221 AMOTQ4VCS5 1084 aa13.11□□□□□ -0.31
APTX-217ENST00000473221 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.11□□□□□ -0.31
APTX-217ENST00000473221 PLEKHG5O94827 1062 aa13.1□□□□□ -0.31
APTX-217ENST00000473221 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
APTX-217ENST00000473221 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
APTX-217ENST00000473221 CFAP44Q96MT7 982 aa13.1□□□□□ -0.31
APTX-217ENST00000473221 FANCIQ9NVI1 1328 aa13.1□□□□□ -0.31
APTX-217ENST00000473221 PLEKHO1Q53GL0 409 aaPredicted RBP13.09□□□□□ -0.31
APTX-217ENST00000473221 ZNF428Q96B54 188 aa13.09□□□□□ -0.31
APTX-217ENST00000473221 PRDM11Q9NQV5 511 aa13.09□□□□□ -0.31
APTX-217ENST00000473221 GNAT3A8MTJ3 354 aa13.08□□□□□ -0.32
APTX-217ENST00000473221 RBM6P78332 1123 aaKnown RBP13.08□□□□□ -0.32
APTX-217ENST00000473221 USHBP1Q8N6Y0 703 aa13.07□□□□□ -0.32
APTX-217ENST00000473221 QTRT2Q9H974 415 aaKnown RBP13.07□□□□□ -0.32
APTX-217ENST00000473221 BABAM1Q9NWV8 329 aa13.07□□□□□ -0.32
APTX-217ENST00000473221 AFF2P51816 1311 aa13.07□□□□□ -0.32
APTX-217ENST00000473221 COL14A1Q05707 1796 aaKnown RBP13.07□□□□□ -0.32
APTX-217ENST00000473221 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
APTX-217ENST00000473221 LRRC37A3O60309 1634 aa13.06□□□□□ -0.32
APTX-217ENST00000473221 CSB-PGBD3P0DP91 1061 aa13.06□□□□□ -0.32
APTX-217ENST00000473221 EXOSC9Q06265 439 aaKnown RBP13.06□□□□□ -0.32
APTX-217ENST00000473221 CHRNA2Q15822 529 aa13.06□□□□□ -0.32
APTX-217ENST00000473221 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.06□□□□□ -0.321e-6■□□□□ 10.8
APTX-217ENST00000473221 WDR17Q8IZU2 1322 aa13.06□□□□□ -0.32
APTX-217ENST00000473221 CRB1P82279 1406 aa13.05□□□□□ -0.32
APTX-217ENST00000473221 COL5A2P05997 1499 aaPredicted RBP13.05□□□□□ -0.32
APTX-217ENST00000473221 FAM83GA6ND36 823 aa13.05□□□□□ -0.32
APTX-217ENST00000473221 CHL1O00533 1208 aa13.05□□□□□ -0.32
APTX-217ENST00000473221 RARSP54136 660 aaKnown RBP13.05□□□□□ -0.32
APTX-217ENST00000473221 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
APTX-217ENST00000473221 TSR2Q969E8 191 aaKnown RBP13.05□□□□□ -0.32
APTX-217ENST00000473221 THUMPD2Q9BTF0 503 aaKnown RBP13.05□□□□□ -0.32
APTX-217ENST00000473221 NLRP2Q9NX02 1062 aa13.05□□□□□ -0.32
APTX-217ENST00000473221 TATP17735 454 aaPredicted RBP13.04□□□□□ -0.32
APTX-217ENST00000473221 DCTN1Q14203 1278 aa13.04□□□□□ -0.32
APTX-217ENST00000473221 MCM10Q7L590 875 aa13.04□□□□□ -0.32
APTX-217ENST00000473221 RAPGEF4Q8WZA2 1011 aa13.04□□□□□ -0.32
APTX-217ENST00000473221 MBIPQ9NS73 344 aa13.04□□□□□ -0.32
APTX-217ENST00000473221 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
APTX-217ENST00000473221 LAS1LQ9Y4W2 734 aaKnown RBP13.04□□□□□ -0.32
APTX-217ENST00000473221 VIRMAQ69YN4 1812 aaKnown RBP13.04□□□□□ -0.32
APTX-217ENST00000473221 OVOS2A0A0G2JMS6 1433 aa13.04□□□□□ -0.32
APTX-217ENST00000473221 RGS12O14924 1447 aa13.04□□□□□ -0.32
APTX-217ENST00000473221 IRX6P78412 446 aaPredicted RBP13.03□□□□□ -0.32
APTX-217ENST00000473221 ALDH1L2Q3SY69 923 aa13.03□□□□□ -0.32
APTX-217ENST00000473221 CARD10Q9BWT7 1032 aa13.03□□□□□ -0.32
APTX-217ENST00000473221 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.32
APTX-217ENST00000473221 PKD1L3Q7Z443 1732 aa13.02□□□□□ -0.32
APTX-217ENST00000473221 PARP4Q9UKK3 1724 aaKnown RBP13.02□□□□□ -0.32
APTX-217ENST00000473221 CCDC125Q86Z20 511 aa13.02□□□□□ -0.33
APTX-217ENST00000473221 IL17REQ8NFR9 667 aa13.02□□□□□ -0.33
APTX-217ENST00000473221 SPG7Q9UQ90 795 aa13.02□□□□□ -0.33
APTX-217ENST00000473221 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.33
APTX-217ENST00000473221 EP400Q96L91 3159 aa13.02□□□□□ -0.33
APTX-217ENST00000473221 NUTM2BA6NNL0 878 aaPredicted RBP13.01□□□□□ -0.33
APTX-217ENST00000473221 NUTM2EB1AL46 878 aaPredicted RBP13.01□□□□□ -0.33
APTX-217ENST00000473221 BCAR3O75815 825 aa13.01□□□□□ -0.33
APTX-217ENST00000473221 BRPF1P55201 1214 aaPredicted RBP13.01□□□□□ -0.33
APTX-217ENST00000473221 EVA1CP58658 441 aa13.01□□□□□ -0.33
APTX-217ENST00000473221 PDE3AQ14432 1141 aa13.01□□□□□ -0.33
APTX-217ENST00000473221 C1orf141Q5JVX7 400 aa13.01□□□□□ -0.33
APTX-217ENST00000473221 ZNF530Q6P9A1 599 aaPredicted RBP13.01□□□□□ -0.33
APTX-217ENST00000473221 TOM1L2Q6ZVM7 507 aa13.01□□□□□ -0.33
APTX-217ENST00000473221 NUTM2AQ8IVF1 878 aaPredicted RBP13.01□□□□□ -0.33
APTX-217ENST00000473221 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
APTX-217ENST00000473221 SOS1Q07889 1333 aaPredicted RBP13□□□□□ -0.33
APTX-217ENST00000473221 VAMP4O75379 141 aa13□□□□□ -0.33
APTX-217ENST00000473221 MS4A1P11836 297 aa13□□□□□ -0.33
APTX-217ENST00000473221 TAF7Q15545 349 aaPredicted RBP13□□□□□ -0.33
APTX-217ENST00000473221 TWISTNBQ3B726 338 aaPredicted RBP12.99□□□□□ -0.33
APTX-217ENST00000473221 IFNL2Q8IZJ0 200 aa12.99□□□□□ -0.33
APTX-217ENST00000473221 SCN11AQ9UI33 1791 aa12.99□□□□□ -0.33
APTX-217ENST00000473221 MEGF6O75095 1541 aa12.98□□□□□ -0.33
APTX-217ENST00000473221 PLIN1O60240 522 aa12.98□□□□□ -0.33
APTX-217ENST00000473221 HSP90AB1P08238 724 aaKnown RBP12.98□□□□□ -0.33
APTX-217ENST00000473221 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
APTX-217ENST00000473221 SIPA1L3O60292 1781 aaPredicted RBP12.98□□□□□ -0.33
APTX-217ENST00000473221 KDM3BQ7LBC6 1761 aa12.98□□□□□ -0.33
APTX-217ENST00000473221 NWD2Q9ULI1 1742 aa12.98□□□□□ -0.33
APTX-217ENST00000473221 PLCH1Q4KWH8 1693 aa12.97□□□□□ -0.33
APTX-217ENST00000473221 IPO8O15397 1037 aaKnown RBP12.97□□□□□ -0.33
APTX-217ENST00000473221 RNMTO43148 476 aaKnown RBP12.97□□□□□ -0.33
APTX-217ENST00000473221 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
APTX-217ENST00000473221 C8orf37Q96NL8 207 aa12.97□□□□□ -0.33
APTX-217ENST00000473221 SMC4Q9NTJ3 1288 aa12.97□□□□□ -0.33
APTX-217ENST00000473221 BTG4Q9NY30 223 aa12.97□□□□□ -0.33
APTX-217ENST00000473221 CACNA1FO60840 1977 aa12.96□□□□□ -0.33
APTX-217ENST00000473221 KIF16BQ96L93 1317 aa12.96□□□□□ -0.33
APTX-217ENST00000473221 IL2RBP14784 551 aa12.96□□□□□ -0.33
APTX-217ENST00000473221 PHKG2P15735 406 aa12.96□□□□□ -0.33
APTX-217ENST00000473221 CANXP27824 592 aaKnown RBP12.96□□□□□ -0.33
APTX-217ENST00000473221 TEFQ10587 303 aa12.96□□□□□ -0.33
APTX-217ENST00000473221 AAMPQ13685 434 aa12.96□□□□□ -0.33
APTX-217ENST00000473221 ZKSCAN2Q63HK3 967 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms