RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 ESF1Q9H501 851 aaKnown RBP13.86□□□□□ -0.19
SGCE-210ENST00000472326 ZNF395Q9H8N7 513 aaPredicted RBP13.86□□□□□ -0.19
SGCE-210ENST00000472326 TFIP11Q9UBB9 837 aaKnown RBP13.86□□□□□ -0.19
SGCE-210ENST00000472326 UPP2O95045 317 aa13.85□□□□□ -0.19
SGCE-210ENST00000472326 MYCP01106 439 aaPredicted RBP13.85□□□□□ -0.19
SGCE-210ENST00000472326 NCOA4Q13772 614 aa13.85□□□□□ -0.19
SGCE-210ENST00000472326 SCARF1Q14162 830 aa13.85□□□□□ -0.19
SGCE-210ENST00000472326 TSEN34Q9BSV6 310 aaKnown RBP13.85□□□□□ -0.19
SGCE-210ENST00000472326 ATP9BO43861 1147 aa13.84□□□□□ -0.19
SGCE-210ENST00000472326 USP4Q13107 963 aa13.84□□□□□ -0.19
SGCE-210ENST00000472326 ERICH6Q7L0X2 663 aa13.84□□□□□ -0.19
SGCE-210ENST00000472326 PALM3A6NDB9 673 aaPredicted RBP13.83□□□□□ -0.2
SGCE-210ENST00000472326 ATP5J2-PTCD1G3V325 749 aa13.83□□□□□ -0.2
SGCE-210ENST00000472326 PPP1R12CQ9BZL4 782 aa13.83□□□□□ -0.2
SGCE-210ENST00000472326 USP17L3A6NCW0 530 aa13.82□□□□□ -0.2
SGCE-210ENST00000472326 USP17L4A6NCW7 530 aa13.82□□□□□ -0.2
SGCE-210ENST00000472326 USP17L2Q6R6M4 530 aa13.82□□□□□ -0.2
SGCE-210ENST00000472326 USP17L1Q7RTZ2 530 aa13.82□□□□□ -0.2
SGCE-210ENST00000472326 TRIM52Q96A61 297 aa13.82□□□□□ -0.2
SGCE-210ENST00000472326 PTGIRP43119 386 aa13.81□□□□□ -0.2
SGCE-210ENST00000472326 EML3Q32P44 896 aa13.81□□□□□ -0.2
SGCE-210ENST00000472326 STAU1O95793 577 aaKnown RBP13.8□□□□□ -0.2
SGCE-210ENST00000472326 CYP2U1Q7Z449 544 aa13.8□□□□□ -0.2
SGCE-210ENST00000472326 C1orf115Q9H7X2 142 aa13.8□□□□□ -0.2
SGCE-210ENST00000472326 RAB6BQ9NRW1 208 aa13.8□□□□□ -0.2
SGCE-210ENST00000472326 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
SGCE-210ENST00000472326 INSM2Q96T92 566 aaPredicted RBP13.79□□□□□ -0.2
SGCE-210ENST00000472326 ARHGEF10LQ9HCE6 1279 aa13.79□□□□□ -0.2
SGCE-210ENST00000472326 MAFBQ9Y5Q3 323 aaPredicted RBP13.79□□□□□ -0.2
SGCE-210ENST00000472326 C11orf95C9JLR9 678 aaPredicted RBP13.78□□□□□ -0.2
SGCE-210ENST00000472326 SPINT1O43278 529 aa13.78□□□□□ -0.2
SGCE-210ENST00000472326 SNRPBP14678 240 aaKnown RBP13.78□□□□□ -0.2
SGCE-210ENST00000472326 SIRT1Q96EB6 747 aa13.78□□□□□ -0.2
SGCE-210ENST00000472326 SENP2Q9HC62 589 aa13.78□□□□□ -0.2
SGCE-210ENST00000472326 LMOD1P29536 600 aaPredicted RBP13.77□□□□□ -0.21
SGCE-210ENST00000472326 ZNF787Q6DD87 383 aa13.77□□□□□ -0.21
SGCE-210ENST00000472326 PLEKHM2Q8IWE5 1019 aa13.77□□□□□ -0.21
SGCE-210ENST00000472326 TRIM47Q96LD4 638 aa13.77□□□□□ -0.21
SGCE-210ENST00000472326 SOBPA7XYQ1 873 aa13.76□□□□□ -0.21
SGCE-210ENST00000472326 MEN1O00255 615 aa13.76□□□□□ -0.21
SGCE-210ENST00000472326 CTSOP43234 321 aaPredicted RBP13.76□□□□□ -0.21
SGCE-210ENST00000472326 NOD1Q9Y239 953 aa13.76□□□□□ -0.21
SGCE-210ENST00000472326 A0A1W2PRU2 124 aa13.75□□□□□ -0.21
SGCE-210ENST00000472326 CFAP70Q5T0N1 1121 aa13.75□□□□□ -0.21
SGCE-210ENST00000472326 POLMQ9NP87 494 aaPredicted RBP13.75□□□□□ -0.21
SGCE-210ENST00000472326 LZTS3O60299 673 aaPredicted RBP13.74□□□□□ -0.21
SGCE-210ENST00000472326 RFX1P22670 979 aa13.74□□□□□ -0.21
SGCE-210ENST00000472326 GTF2IP78347 998 aa13.74□□□□□ -0.21
SGCE-210ENST00000472326 KIFC2Q96AC6 838 aa13.74□□□□□ -0.21
SGCE-210ENST00000472326 MKRN1Q9UHC7 482 aaKnown RBP13.74□□□□□ -0.21
SGCE-210ENST00000472326 PCDHGA11Q9Y5H2 935 aa13.74□□□□□ -0.21
SGCE-210ENST00000472326 SOS2Q07890 1332 aaPredicted RBP13.73□□□□□ -0.21
SGCE-210ENST00000472326 FIGNL2A6NMB9 653 aa13.72□□□□□ -0.21
SGCE-210ENST00000472326 TTLL8A6PVC2 850 aa13.72□□□□□ -0.21
SGCE-210ENST00000472326 GNRH1P01148 92 aa13.72□□□□□ -0.21
SGCE-210ENST00000472326 CCDC82Q8N4S0 544 aa13.72□□□□□ -0.21
SGCE-210ENST00000472326 CCDC97Q96F63 343 aaPredicted RBP13.72□□□□□ -0.21
SGCE-210ENST00000472326 ETNK1Q9HBU6 452 aa13.71□□□□□ -0.21
SGCE-210ENST00000472326 IL2RAP01589 272 aa13.7□□□□□ -0.22
SGCE-210ENST00000472326 PSME1Q06323 249 aa13.7□□□□□ -0.22
SGCE-210ENST00000472326 CLN3Q13286 438 aa13.7□□□□□ -0.22
SGCE-210ENST00000472326 FOXD4L5Q5VV16 416 aaPredicted RBP13.7□□□□□ -0.22
SGCE-210ENST00000472326 DNMT3LQ9UJW3 386 aa13.7□□□□□ -0.22
SGCE-210ENST00000472326 KIAA1024Q9UPX6 916 aa13.7□□□□□ -0.22
SGCE-210ENST00000472326 MAN1A2O60476 641 aa13.69□□□□□ -0.22
SGCE-210ENST00000472326 SCNN1DP51172 638 aa13.69□□□□□ -0.22
SGCE-210ENST00000472326 CLDN10P78369 228 aa13.69□□□□□ -0.22
SGCE-210ENST00000472326 CDCA8Q53HL2 280 aa13.69□□□□□ -0.22
SGCE-210ENST00000472326 GDF10P55107 478 aa13.68□□□□□ -0.22
SGCE-210ENST00000472326 CNKSR1Q969H4 720 aa13.68□□□□□ -0.22
SGCE-210ENST00000472326 NLRP3Q96P20 1036 aa13.68□□□□□ -0.22
SGCE-210ENST00000472326 SERPINA10Q9UK55 444 aa13.68□□□□□ -0.22
SGCE-210ENST00000472326 KANK4Q5T7N3 995 aaPredicted RBP13.67□□□□□ -0.22
SGCE-210ENST00000472326 TRIM50Q86XT4 487 aa13.67□□□□□ -0.22
SGCE-210ENST00000472326 OGFOD1Q8N543 542 aa13.67□□□□□ -0.22
SGCE-210ENST00000472326 RASA1P20936 1047 aa13.66□□□□□ -0.22
SGCE-210ENST00000472326 RNF217Q8TC41 542 aa13.66□□□□□ -0.22
SGCE-210ENST00000472326 ESYT1Q9BSJ8 1104 aa13.66□□□□□ -0.22
SGCE-210ENST00000472326 TMEM229AB2RXF0 380 aa13.65□□□□□ -0.22
SGCE-210ENST00000472326 ZBTB7BO15156 539 aaPredicted RBP13.65□□□□□ -0.22
SGCE-210ENST00000472326 ESCO1Q5FWF5 840 aa13.65□□□□□ -0.22
SGCE-210ENST00000472326 ZNF594Q96JF6 807 aaPredicted RBP13.65□□□□□ -0.22
SGCE-210ENST00000472326 VRTNQ9H8Y1 702 aa13.65□□□□□ -0.22
SGCE-210ENST00000472326 DNAAF2Q9NVR5 837 aaKnown RBP13.65□□□□□ -0.22
SGCE-210ENST00000472326 ATP1A2P50993 1020 aa13.64□□□□□ -0.23
SGCE-210ENST00000472326 TPCN2Q8NHX9 752 aa13.64□□□□□ -0.23
SGCE-210ENST00000472326 XAGE2Q96GT9 111 aa13.64□□□□□ -0.23
SGCE-210ENST00000472326 SERTAD1Q9UHV2 236 aa13.64□□□□□ -0.23
SGCE-210ENST00000472326 INHAP05111 366 aa13.63□□□□□ -0.23
SGCE-210ENST00000472326 RNF144AP50876 292 aaPredicted RBP13.63□□□□□ -0.23
SGCE-210ENST00000472326 CRTC2Q53ET0 693 aaPredicted RBP13.63□□□□□ -0.23
SGCE-210ENST00000472326 PRICKLE2Q7Z3G6 844 aa13.63□□□□□ -0.23
SGCE-210ENST00000472326 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.63□□□□□ -0.23
SGCE-210ENST00000472326 HRH3Q9Y5N1 445 aa13.63□□□□□ -0.23
SGCE-210ENST00000472326 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.62□□□□□ -0.23
SGCE-210ENST00000472326 CENPCQ03188 943 aa13.62□□□□□ -0.23
SGCE-210ENST00000472326 SLC27A3Q5K4L6 730 aa13.62□□□□□ -0.23
SGCE-210ENST00000472326 CCDC102BQ68D86 513 aa13.62□□□□□ -0.23
SGCE-210ENST00000472326 GPC1P35052 558 aa13.6□□□□□ -0.23
SGCE-210ENST00000472326 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms