RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	NRAP	Q86VF7	1730 aa		13.83	□□□□□ -0.2
PUM1-208	ENST00000471894	AFF2	P51816	1311 aa		13.83	□□□□□ -0.2
PUM1-208	ENST00000471894	BCL9L	Q86UU0	1499 aa		13.82	□□□□□ -0.2
PUM1-208	ENST00000471894	LMOD3	Q0VAK6	560 aa		13.82	□□□□□ -0.2
PUM1-208	ENST00000471894	VPS72	Q15906	364 aa		13.82	□□□□□ -0.2
PUM1-208	ENST00000471894	CCDC27	Q2M243	656 aa		13.82	□□□□□ -0.2
PUM1-208	ENST00000471894	WWC1	Q8IX03	1113 aa		13.82	□□□□□ -0.2
PUM1-208	ENST00000471894	SPG7	Q9UQ90	795 aa		13.82	□□□□□ -0.2
PUM1-208	ENST00000471894	SPATA31A1	Q5TZJ5	1347 aa		13.82	□□□□□ -0.2
PUM1-208	ENST00000471894	SPATA31A5	Q5VU36	1347 aa		13.82	□□□□□ -0.2
PUM1-208	ENST00000471894	SPATA31A7	Q8IWB4	1347 aa		13.82	□□□□□ -0.2
PUM1-208	ENST00000471894	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.81	□□□□□ -0.2
PUM1-208	ENST00000471894	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
PUM1-208	ENST00000471894	TRIM35	Q9UPQ4	493 aa		13.81	□□□□□ -0.2
PUM1-208	ENST00000471894	THRAP3	Q9Y2W1	955 aa	Known RBP	13.81	□□□□□ -0.2
PUM1-208	ENST00000471894	GNAT3	A8MTJ3	354 aa		13.8	□□□□□ -0.2
PUM1-208	ENST00000471894	C1orf141	Q5JVX7	400 aa		13.8	□□□□□ -0.2
PUM1-208	ENST00000471894	ZCRB1	Q8TBF4	217 aa	Known RBP	13.8	□□□□□ -0.2
PUM1-208	ENST00000471894	RTF1	Q92541	710 aa	Known RBP	13.8	□□□□□ -0.2
PUM1-208	ENST00000471894	DLG5	Q8TDM6	1919 aa		13.8	□□□□□ -0.2
PUM1-208	ENST00000471894	MEGF6	O75095	1541 aa		13.8	□□□□□ -0.2
PUM1-208	ENST00000471894	HTATSF1	O43719	755 aa	Known RBP	13.79	□□□□□ -0.2
PUM1-208	ENST00000471894	CENPB	P07199	599 aa	Predicted RBP	13.79	□□□□□ -0.2
PUM1-208	ENST00000471894	GOLGA2	Q08379	1002 aa		13.79	□□□□□ -0.2
PUM1-208	ENST00000471894	PDE3B	Q13370	1112 aa		13.79	□□□□□ -0.2
PUM1-208	ENST00000471894	WDR63	Q8IWG1	891 aa		13.79	□□□□□ -0.2
PUM1-208	ENST00000471894	DCTN1	Q14203	1278 aa		13.78	□□□□□ -0.2
PUM1-208	ENST00000471894	AKAP4	Q5JQC9	854 aa		13.78	□□□□□ -0.2
PUM1-208	ENST00000471894	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.78	□□□□□ -0.2
PUM1-208	ENST00000471894	QTRT2	Q9H974	415 aa	Known RBP	13.78	□□□□□ -0.2
PUM1-208	ENST00000471894	TRPC5	Q9UL62	973 aa	Predicted RBP	13.78	□□□□□ -0.2
PUM1-208	ENST00000471894	ZNF521	Q96K83	1311 aa		13.78	□□□□□ -0.2
PUM1-208	ENST00000471894	PLEKHG2	Q9H7P9	1386 aa		13.78	□□□□□ -0.2
PUM1-208	ENST00000471894	OVOS2	A0A0G2JMS6	1433 aa		13.78	□□□□□ -0.2
PUM1-208	ENST00000471894	EXOC5	O00471	708 aa		13.77	□□□□□ -0.21
PUM1-208	ENST00000471894	CALD1	Q05682	793 aa	Known RBP	13.77	□□□□□ -0.21
PUM1-208	ENST00000471894	BARGIN	Q6ZT62	677 aa		13.77	□□□□□ -0.21
PUM1-208	ENST00000471894	MCM10	Q7L590	875 aa		13.77	□□□□□ -0.21
PUM1-208	ENST00000471894	IFNL2	Q8IZJ0	200 aa		13.77	□□□□□ -0.21
PUM1-208	ENST00000471894	CDCA7L	Q96GN5	454 aa		13.77	□□□□□ -0.21
PUM1-208	ENST00000471894	MAP3K5	Q99683	1374 aa		13.77	□□□□□ -0.21
PUM1-208	ENST00000471894	PARP4	Q9UKK3	1724 aa	Known RBP	13.77	□□□□□ -0.21
PUM1-208	ENST00000471894	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.76	□□□□□ -0.21
PUM1-208	ENST00000471894	FAM98C	Q17RN3	349 aa	Known RBP	13.76	□□□□□ -0.21
PUM1-208	ENST00000471894	DDX54	Q8TDD1	881 aa	Known RBP	13.76	□□□□□ -0.21
PUM1-208	ENST00000471894	GJD4	Q96KN9	370 aa	Predicted RBP	13.76	□□□□□ -0.21
PUM1-208	ENST00000471894	THUMPD2	Q9BTF0	503 aa	Known RBP	13.76	□□□□□ -0.21
PUM1-208	ENST00000471894	PCDH11X	Q9BZA7	1347 aa		13.75	□□□□□ -0.21
PUM1-208	ENST00000471894	PCDH11Y	Q9BZA8	1340 aa		13.75	□□□□□ -0.21
PUM1-208	ENST00000471894	PHKG2	P15735	406 aa		13.75	□□□□□ -0.21
PUM1-208	ENST00000471894	ZNF772	Q68DY9	489 aa	Predicted RBP	13.75	□□□□□ -0.21
PUM1-208	ENST00000471894	MPRIP	Q6WCQ1	1025 aa		13.75	□□□□□ -0.21
PUM1-208	ENST00000471894	DISP2	A7MBM2	1401 aa		13.74	□□□□□ -0.21
PUM1-208	ENST00000471894	ATRN	O75882	1429 aa		13.74	□□□□□ -0.21
PUM1-208	ENST00000471894	IL16	Q14005	1332 aa		13.74	□□□□□ -0.21
PUM1-208	ENST00000471894		A0A0G2JS52	829 aa		13.74	□□□□□ -0.21
PUM1-208	ENST00000471894		E9PSI1	815 aa		13.74	□□□□□ -0.21
PUM1-208	ENST00000471894	CYP27B1	O15528	508 aa		13.74	□□□□□ -0.21
PUM1-208	ENST00000471894	HSP90AB1	P08238	724 aa	Known RBP	13.74	□□□□□ -0.21
PUM1-208	ENST00000471894	MYT1	Q01538	1121 aa		13.74	□□□□□ -0.21
PUM1-208	ENST00000471894	SLFN5	Q08AF3	891 aa		13.74	□□□□□ -0.21
PUM1-208	ENST00000471894	DDB1	Q16531	1140 aa		13.74	□□□□□ -0.21
PUM1-208	ENST00000471894	IL17RE	Q8NFR9	667 aa		13.74	□□□□□ -0.21
PUM1-208	ENST00000471894	LGR6	Q9HBX8	967 aa		13.74	□□□□□ -0.21
PUM1-208	ENST00000471894	LAS1L	Q9Y4W2	734 aa	Known RBP	13.74	□□□□□ -0.21
PUM1-208	ENST00000471894	PKD1L3	Q7Z443	1732 aa		13.73	□□□□□ -0.21
PUM1-208	ENST00000471894	RNMT	O43148	476 aa	Known RBP	13.73	□□□□□ -0.21
PUM1-208	ENST00000471894	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.73	□□□□□ -0.21
PUM1-208	ENST00000471894	GNAI1	P63096	354 aa		13.72	□□□□□ -0.21
PUM1-208	ENST00000471894	ILDR1	Q86SU0	546 aa	Predicted RBP	13.72	□□□□□ -0.21
PUM1-208	ENST00000471894	MYH16	Q9H6N6	1097 aa		13.72	□□□□□ -0.21
PUM1-208	ENST00000471894	WNK3	Q9BYP7	1800 aa		13.71	□□□□□ -0.21
PUM1-208	ENST00000471894	TEF	Q10587	303 aa		13.71	□□□□□ -0.21
PUM1-208	ENST00000471894	TRMT2A	Q8IZ69	625 aa	Known RBP	13.71	□□□□□ -0.21
PUM1-208	ENST00000471894	DCAF5	Q96JK2	942 aa		13.71	□□□□□ -0.21
PUM1-208	ENST00000471894	IFT57	Q9NWB7	429 aa		13.71	□□□□□ -0.21
PUM1-208	ENST00000471894	NKX1-1	Q15270	411 aa	Predicted RBP	13.7	□□□□□ -0.22
PUM1-208	ENST00000471894	TAF7	Q15545	349 aa	Predicted RBP	13.7	□□□□□ -0.22
PUM1-208	ENST00000471894	DUSP27	Q5VZP5	1158 aa		13.7	□□□□□ -0.22
PUM1-208	ENST00000471894	CFAP44	Q96MT7	982 aa		13.7	□□□□□ -0.22
PUM1-208	ENST00000471894	ONECUT3	O60422	494 aa	Predicted RBP	13.69	□□□□□ -0.22
PUM1-208	ENST00000471894	ZNF853	P0CG23	659 aa		13.69	□□□□□ -0.22
PUM1-208	ENST00000471894	GLI3	P10071	1580 aa		13.69	□□□□□ -0.22
PUM1-208	ENST00000471894	CEMIP	Q8WUJ3	1361 aa		13.69	□□□□□ -0.22
PUM1-208	ENST00000471894	SHANK3	Q9BYB0	1731 aa		13.68	□□□□□ -0.22
PUM1-208	ENST00000471894	TNS2	Q63HR2	1409 aa		13.68	□□□□□ -0.22
PUM1-208	ENST00000471894	CHL1	O00533	1208 aa		13.68	□□□□□ -0.22
PUM1-208	ENST00000471894	CABP4	P57796	275 aa		13.68	□□□□□ -0.22
PUM1-208	ENST00000471894	RBM6	P78332	1123 aa	Known RBP	13.68	□□□□□ -0.22
PUM1-208	ENST00000471894	TSR2	Q969E8	191 aa	Known RBP	13.68	□□□□□ -0.22
PUM1-208	ENST00000471894	MIS18A	Q9NYP9	233 aa		13.68	□□□□□ -0.22
PUM1-208	ENST00000471894	VIRMA	Q69YN4	1812 aa	Known RBP	13.68	□□□□□ -0.22
PUM1-208	ENST00000471894	KAT6B	Q8WYB5	2073 aa		13.67	□□□□□ -0.22
PUM1-208	ENST00000471894	ERVV-2	B6SEH9	535 aa		13.67	□□□□□ -0.22
PUM1-208	ENST00000471894	SEPT12	Q8IYM1	358 aa		13.67	□□□□□ -0.22
PUM1-208	ENST00000471894	MARCH10	Q8NA82	808 aa	Predicted RBP	13.67	□□□□□ -0.22
PUM1-208	ENST00000471894	NFATC2IP	Q8NCF5	419 aa		13.67	□□□□□ -0.22
PUM1-208	ENST00000471894	SLC52A2	Q9HAB3	445 aa		13.67	□□□□□ -0.22
PUM1-208	ENST00000471894	MBIP	Q9NS73	344 aa		13.67	□□□□□ -0.22
PUM1-208	ENST00000471894	TSPYL4	Q9UJ04	414 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms