RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 RSPH6AQ9H0K4 717 aa16.86■□□□□ 0.29
SND1-209ENST00000470723 DDB1Q16531 1140 aa16.85■□□□□ 0.29
SND1-209ENST00000470723 AMOTQ4VCS5 1084 aa16.85■□□□□ 0.29
SND1-209ENST00000470723 OVOS2A0A0G2JMS6 1433 aa16.85■□□□□ 0.29
SND1-209ENST00000470723 HMOX1P09601 288 aa16.84■□□□□ 0.29
SND1-209ENST00000470723 PLEKHF1Q96S99 279 aa16.84■□□□□ 0.29
SND1-209ENST00000470723 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
SND1-209ENST00000470723 MRS2Q9HD23 443 aa16.84■□□□□ 0.29
SND1-209ENST00000470723 ADAMTS8Q9UP79 889 aa16.84■□□□□ 0.29
SND1-209ENST00000470723 MEGF6O75095 1541 aa16.84■□□□□ 0.29
SND1-209ENST00000470723 PARP4Q9UKK3 1724 aaKnown RBP16.84■□□□□ 0.29
SND1-209ENST00000470723 PLEKHO1Q53GL0 409 aaPredicted RBP16.83■□□□□ 0.28
SND1-209ENST00000470723 WNK3Q9BYP7 1800 aa16.82■□□□□ 0.28
SND1-209ENST00000470723 RGS12O14924 1447 aa16.82■□□□□ 0.28
SND1-209ENST00000470723 PDE3BQ13370 1112 aa16.82■□□□□ 0.28
SND1-209ENST00000470723 KRT27Q7Z3Y8 459 aa16.82■□□□□ 0.28
SND1-209ENST00000470723 SPG7Q9UQ90 795 aa16.82■□□□□ 0.28
SND1-209ENST00000470723 NKX1-1Q15270 411 aaPredicted RBP16.81■□□□□ 0.28
SND1-209ENST00000470723 MARCH10Q8NA82 808 aaPredicted RBP16.81■□□□□ 0.28
SND1-209ENST00000470723 PHACTR3Q96KR7 559 aa16.81■□□□□ 0.28
SND1-209ENST00000470723 BCL9O00512 1426 aa16.8■□□□□ 0.28
SND1-209ENST00000470723 PRKAR2BP31323 418 aa16.8■□□□□ 0.28
SND1-209ENST00000470723 WDR43Q15061 677 aaKnown RBP eCLIP16.8■□□□□ 0.28
SND1-209ENST00000470723 BRWD3Q6RI45 1802 aa16.8■□□□□ 0.28
SND1-209ENST00000470723 CYP27B1O15528 508 aa16.79■□□□□ 0.28
SND1-209ENST00000470723 TNS2Q63HR2 1409 aa16.79■□□□□ 0.28
SND1-209ENST00000470723 MTHFSDQ2M296 383 aaKnown RBP16.78■□□□□ 0.28
SND1-209ENST00000470723 IFNL2Q8IZJ0 200 aa16.78■□□□□ 0.28
SND1-209ENST00000470723 PCDH11XQ9BZA7 1347 aa16.77■□□□□ 0.28
SND1-209ENST00000470723 PCDH11YQ9BZA8 1340 aa16.77■□□□□ 0.28
SND1-209ENST00000470723 PKD1L3Q7Z443 1732 aa16.77■□□□□ 0.28
SND1-209ENST00000470723 PHKG2P15735 406 aa16.77■□□□□ 0.28
SND1-209ENST00000470723 FAM196AQ6ZSG2 479 aa16.77■□□□□ 0.28
SND1-209ENST00000470723 RUNDC1Q96C34 613 aa16.77■□□□□ 0.28
SND1-209ENST00000470723 LRRC37A3O60309 1634 aa16.77■□□□□ 0.27
SND1-209ENST00000470723 A0A0G2JS52 829 aa16.76■□□□□ 0.27
SND1-209ENST00000470723 MYT1Q01538 1121 aa16.76■□□□□ 0.27
SND1-209ENST00000470723 GAS2L2Q8NHY3 880 aa16.76■□□□□ 0.27
SND1-209ENST00000470723 DDX54Q8TDD1 881 aaKnown RBP16.76■□□□□ 0.27
SND1-209ENST00000470723 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
SND1-209ENST00000470723 AKAP4Q5JQC9 854 aa16.75■□□□□ 0.27
SND1-209ENST00000470723 SHANK3Q9BYB0 1731 aa16.74■□□□□ 0.27
SND1-209ENST00000470723 HTATSF1O43719 755 aaKnown RBP16.74■□□□□ 0.27
SND1-209ENST00000470723 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
SND1-209ENST00000470723 ZNF530Q6P9A1 599 aaPredicted RBP16.74■□□□□ 0.27
SND1-209ENST00000470723 EP400Q96L91 3159 aa16.73■□□□□ 0.27
SND1-209ENST00000470723 NEFMP07197 916 aa16.73■□□□□ 0.27
SND1-209ENST00000470723 NFE2L2Q16236 605 aa16.72■□□□□ 0.27
SND1-209ENST00000470723 DCAF5Q96JK2 942 aa16.72■□□□□ 0.27
SND1-209ENST00000470723 GNAT3A8MTJ3 354 aa16.71■□□□□ 0.27
SND1-209ENST00000470723 ERVV-2B6SEH9 535 aa16.71■□□□□ 0.27
SND1-209ENST00000470723 TMPOP42166 694 aaKnown RBP16.71■□□□□ 0.27
SND1-209ENST00000470723 C1orf141Q5JVX7 400 aa16.71■□□□□ 0.27
SND1-209ENST00000470723 FAM182BQ5T319 152 aa16.71■□□□□ 0.27
SND1-209ENST00000470723 CCDC146Q8IYE0 955 aa16.7■□□□□ 0.26
SND1-209ENST00000470723 FAM9BQ8IZU0 186 aa16.7■□□□□ 0.26
SND1-209ENST00000470723 IL17REQ8NFR9 667 aa16.7■□□□□ 0.26
SND1-209ENST00000470723 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
SND1-209ENST00000470723 CCDC125Q86Z20 511 aa16.69■□□□□ 0.26
SND1-209ENST00000470723 APAF1O14727 1248 aa16.68■□□□□ 0.26
SND1-209ENST00000470723 RNMTO43148 476 aaKnown RBP16.68■□□□□ 0.26
SND1-209ENST00000470723 MPRIPQ6WCQ1 1025 aa16.68■□□□□ 0.26
SND1-209ENST00000470723 BCL11BQ9C0K0 894 aaPredicted RBP16.68■□□□□ 0.26
SND1-209ENST00000470723 LGR6Q9HBX8 967 aa16.68■□□□□ 0.26
SND1-209ENST00000470723 KAT6BQ8WYB5 2073 aa16.68■□□□□ 0.26
SND1-209ENST00000470723 PRIM1P49642 420 aaKnown RBP16.67■□□□□ 0.26
SND1-209ENST00000470723 RIPK4P57078 832 aa16.67■□□□□ 0.26
SND1-209ENST00000470723 NGEFQ8N5V2 710 aa16.67■□□□□ 0.26
SND1-209ENST00000470723 SBF2Q86WG5 1849 aa16.67■□□□□ 0.26
SND1-209ENST00000470723 CEMIPQ8WUJ3 1361 aa16.66■□□□□ 0.26
SND1-209ENST00000470723 MAP3K5Q99683 1374 aa16.66■□□□□ 0.26
SND1-209ENST00000470723 ADAMTS7Q9UKP4 1686 aa16.66■□□□□ 0.26
SND1-209ENST00000470723 CCDC27Q2M243 656 aa16.66■□□□□ 0.26
SND1-209ENST00000470723 TRIM35Q9UPQ4 493 aa16.66■□□□□ 0.26
SND1-209ENST00000470723 KDM6AO15550 1401 aaPredicted RBP16.65■□□□□ 0.26
SND1-209ENST00000470723 KCNQ2O43526 872 aa16.65■□□□□ 0.26
SND1-209ENST00000470723 SRCAPQ6ZRS2 3230 aa16.64■□□□□ 0.25
SND1-209ENST00000470723 DLG5Q8TDM6 1919 aa16.64■□□□□ 0.25
SND1-209ENST00000470723 SCN11AQ9UI33 1791 aa16.64■□□□□ 0.25
SND1-209ENST00000470723 TRIM37O94972 964 aa16.63■□□□□ 0.25
SND1-209ENST00000470723 LMOD3Q0VAK6 560 aa16.63■□□□□ 0.25
SND1-209ENST00000470723 PTF1AQ7RTS3 328 aa16.63■□□□□ 0.25
SND1-209ENST00000470723 NFATC2IPQ8NCF5 419 aa16.63■□□□□ 0.25
SND1-209ENST00000470723 PIGBQ92521 554 aa16.63■□□□□ 0.25
SND1-209ENST00000470723 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
SND1-209ENST00000470723 SLC52A2Q9HAB3 445 aa16.63■□□□□ 0.25
SND1-209ENST00000470723 PLSCR1O15162 318 aa16.62■□□□□ 0.25
SND1-209ENST00000470723 CABP4P57796 275 aa16.62■□□□□ 0.25
SND1-209ENST00000470723 ACSBG1Q96GR2 724 aa16.62■□□□□ 0.25
SND1-209ENST00000470723 RRP7AQ9Y3A4 280 aaKnown RBP16.61■□□□□ 0.25
SND1-209ENST00000470723 ITGB4P16144 1822 aa16.61■□□□□ 0.25
SND1-209ENST00000470723 DCTN1Q14203 1278 aa16.6■□□□□ 0.25
SND1-209ENST00000470723 TAF7Q15545 349 aaPredicted RBP16.6■□□□□ 0.25
SND1-209ENST00000470723 NEUROD2Q15784 382 aa16.6■□□□□ 0.25
SND1-209ENST00000470723 MCM10Q7L590 875 aa16.6■□□□□ 0.25
SND1-209ENST00000470723 BABAM1Q9NWV8 329 aa16.6■□□□□ 0.25
SND1-209ENST00000470723 TMOD3Q9NYL9 352 aa16.6■□□□□ 0.25
SND1-209ENST00000470723 NHSQ6T4R5 1651 aa16.59■□□□□ 0.25
SND1-209ENST00000470723 TOGARAM1Q9Y4F4 1720 aa16.59■□□□□ 0.25
SND1-209ENST00000470723 WWC1Q8IX03 1113 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms