RNA–Protein interactions for RNA: ENST00000470650.1

CCDC93-206, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-206ENST00000470650 ERVH48-1M5A8F1 160 aa10.38□□□□□ -0.75
CCDC93-206ENST00000470650 CEP170Q5SW79 1584 aa10.38□□□□□ -0.75
CCDC93-206ENST00000470650 SHROOM2Q13796 1616 aa10.37□□□□□ -0.75
CCDC93-206ENST00000470650 IRF5Q13568 498 aa10.37□□□□□ -0.75
CCDC93-206ENST00000470650 SCARF1Q14162 830 aa10.37□□□□□ -0.75
CCDC93-206ENST00000470650 NBPF20Q3BBV1 942 aa10.37□□□□□ -0.75
CCDC93-206ENST00000470650 MEIOBQ8N635 442 aa10.37□□□□□ -0.75
CCDC93-206ENST00000470650 AGBL1Q96MI9 1066 aa10.37□□□□□ -0.75
CCDC93-206ENST00000470650 PGPEP1Q9NXJ5 209 aa10.37□□□□□ -0.75
CCDC93-206ENST00000470650 ESPNB1AK53 854 aa10.36□□□□□ -0.75
CCDC93-206ENST00000470650 SOCS7O14512 581 aa10.36□□□□□ -0.75
CCDC93-206ENST00000470650 BMP2P12643 396 aa10.36□□□□□ -0.75
CCDC93-206ENST00000470650 ABL2P42684 1182 aa10.36□□□□□ -0.75
CCDC93-206ENST00000470650 MCM6Q14566 821 aa10.36□□□□□ -0.75
CCDC93-206ENST00000470650 ZNF784Q8NCA9 323 aaPredicted RBP10.36□□□□□ -0.75
CCDC93-206ENST00000470650 KIFC2Q96AC6 838 aa10.36□□□□□ -0.75
CCDC93-206ENST00000470650 KDM6BO15054 1643 aa10.36□□□□□ -0.75
CCDC93-206ENST00000470650 ADD1P35611 737 aaKnown RBP10.35□□□□□ -0.75
CCDC93-206ENST00000470650 LINC00528Q8N1L1 170 aa10.35□□□□□ -0.75
CCDC93-206ENST00000470650 ABCC10Q5T3U5 1492 aa10.35□□□□□ -0.75
CCDC93-206ENST00000470650 APBB1O00213 710 aa10.34□□□□□ -0.75
CCDC93-206ENST00000470650 DHX9Q08211 1270 aaKnown RBP10.34□□□□□ -0.75
CCDC93-206ENST00000470650 DIP2BQ9P265 1576 aa10.34□□□□□ -0.75
CCDC93-206ENST00000470650 TSPOAP1O95153 1857 aa10.34□□□□□ -0.75
CCDC93-206ENST00000470650 RELBQ01201 579 aa10.33□□□□□ -0.76
CCDC93-206ENST00000470650 VAC14Q08AM6 782 aa10.33□□□□□ -0.76
CCDC93-206ENST00000470650 Q6ZVU0 165 aa10.33□□□□□ -0.76
CCDC93-206ENST00000470650 POM121Q96HA1 1249 aa10.33□□□□□ -0.76
CCDC93-206ENST00000470650 CYLDQ9NQC7 956 aa10.33□□□□□ -0.76
CCDC93-206ENST00000470650 ABCA5Q8WWZ7 1642 aa10.33□□□□□ -0.76
CCDC93-206ENST00000470650 CUX1P39880 1505 aa10.33□□□□□ -0.76
CCDC93-206ENST00000470650 UPP2O95045 317 aa10.32□□□□□ -0.76
CCDC93-206ENST00000470650 VEGFBP49765 207 aa10.32□□□□□ -0.76
CCDC93-206ENST00000470650 TMEM132AQ24JP5 1023 aa10.32□□□□□ -0.76
CCDC93-206ENST00000470650 ZNF395Q9H8N7 513 aaPredicted RBP10.32□□□□□ -0.76
CCDC93-206ENST00000470650 HECW2Q9P2P5 1572 aa10.31□□□□□ -0.76
CCDC93-206ENST00000470650 GRIN2AQ12879 1464 aa10.31□□□□□ -0.76
CCDC93-206ENST00000470650 LILRA1O75019 489 aa10.31□□□□□ -0.76
CCDC93-206ENST00000470650 FAM69CQ0P6D2 419 aa10.31□□□□□ -0.76
CCDC93-206ENST00000470650 PRM3Q9NNZ6 103 aa10.31□□□□□ -0.76
CCDC93-206ENST00000470650 MAPKBP1O60336 1514 aa10.3□□□□□ -0.76
CCDC93-206ENST00000470650 FIGNL2A6NMB9 653 aa10.3□□□□□ -0.76
CCDC93-206ENST00000470650 TSEN34Q9BSV6 310 aaKnown RBP10.3□□□□□ -0.76
CCDC93-206ENST00000470650 COG6Q9Y2V7 657 aa10.3□□□□□ -0.76
CCDC93-206ENST00000470650 NUP160Q12769 1436 aa10.3□□□□□ -0.76
CCDC93-206ENST00000470650 CEP126Q9P2H0 1117 aa10.29□□□□□ -0.76
CCDC93-206ENST00000470650 TSGA10IPQ3SY00 556 aa10.28□□□□□ -0.76
CCDC93-206ENST00000470650 TREML4Q6UXN2 200 aa10.28□□□□□ -0.76
CCDC93-206ENST00000470650 KDF1Q8NAX2 398 aaPredicted RBP10.28□□□□□ -0.76
CCDC93-206ENST00000470650 ZNF330Q9Y3S2 320 aaPredicted RBP10.28□□□□□ -0.76
CCDC93-206ENST00000470650 MAN1A2O60476 641 aa10.27□□□□□ -0.77
CCDC93-206ENST00000470650 SCTRP47872 440 aa10.27□□□□□ -0.77
CCDC93-206ENST00000470650 NFX1Q12986 1120 aaKnown RBP10.27□□□□□ -0.77
CCDC93-206ENST00000470650 LCE2CQ5TA81 110 aa10.27□□□□□ -0.77
CCDC93-206ENST00000470650 SEPT12Q8IYM1 358 aa10.27□□□□□ -0.77
CCDC93-206ENST00000470650 INSM2Q96T92 566 aaPredicted RBP10.27□□□□□ -0.77
CCDC93-206ENST00000470650 DNMT3LQ9UJW3 386 aa10.27□□□□□ -0.77
CCDC93-206ENST00000470650 PCDHB11Q9Y5F2 797 aa10.27□□□□□ -0.77
CCDC93-206ENST00000470650 SOS2Q07890 1332 aaPredicted RBP10.27□□□□□ -0.77
CCDC93-206ENST00000470650 ADAMTS12P58397 1594 aa10.26□□□□□ -0.77
CCDC93-206ENST00000470650 ADGRL1O94910 1474 aa10.26□□□□□ -0.77
CCDC93-206ENST00000470650 TERTO14746 1132 aaKnown RBP10.26□□□□□ -0.77
CCDC93-206ENST00000470650 CTSOP43234 321 aaPredicted RBP10.26□□□□□ -0.77
CCDC93-206ENST00000470650 ABCA10Q8WWZ4 1543 aa10.25□□□□□ -0.77
CCDC93-206ENST00000470650 WFS1O76024 890 aa10.25□□□□□ -0.77
CCDC93-206ENST00000470650 LCE2AQ5TA79 106 aaPredicted RBP10.25□□□□□ -0.77
CCDC93-206ENST00000470650 CCDC85AQ96PX6 553 aaPredicted RBP10.25□□□□□ -0.77
CCDC93-206ENST00000470650 CDCA7Q9BWT1 371 aaPredicted RBP10.25□□□□□ -0.77
CCDC93-206ENST00000470650 TTLL8A6PVC2 850 aa10.24□□□□□ -0.77
CCDC93-206ENST00000470650 SPINT1O43278 529 aa10.24□□□□□ -0.77
CCDC93-206ENST00000470650 ADH1AP07327 375 aa10.24□□□□□ -0.77
CCDC93-206ENST00000470650 ADCY10Q96PN6 1610 aa10.24□□□□□ -0.77
CCDC93-206ENST00000470650 MCCD1P59942 119 aaPredicted RBP10.23□□□□□ -0.77
CCDC93-206ENST00000470650 EIF4G2P78344 907 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCDC93-206ENST00000470650 RNF20Q5VTR2 975 aa10.23□□□□□ -0.77
CCDC93-206ENST00000470650 FBXO41Q8TF61 875 aa10.23□□□□□ -0.77
CCDC93-206ENST00000470650 NXF1Q9UBU9 619 aaKnown RBP10.23□□□□□ -0.77
CCDC93-206ENST00000470650 PTGIRP43119 386 aa10.22□□□□□ -0.77
CCDC93-206ENST00000470650 POLMQ9NP87 494 aaPredicted RBP10.22□□□□□ -0.77
CCDC93-206ENST00000470650 PPRC1Q5VV67 1664 aaKnown RBP10.22□□□□□ -0.77
CCDC93-206ENST00000470650 UBTFP17480 764 aaKnown RBP10.21□□□□□ -0.77
CCDC93-206ENST00000470650 PRG4Q92954 1404 aaPredicted RBP10.21□□□□□ -0.78
CCDC93-206ENST00000470650 ERVK-9P63128 1117 aa10.2□□□□□ -0.78
CCDC93-206ENST00000470650 CC2D2BQ6DHV5 1058 aa10.2□□□□□ -0.78
CCDC93-206ENST00000470650 ATP5J2-PTCD1G3V325 749 aa10.19□□□□□ -0.78
CCDC93-206ENST00000470650 FLIIQ13045 1269 aa10.19□□□□□ -0.78
CCDC93-206ENST00000470650 WASHC4Q2M389 1173 aa10.19□□□□□ -0.78
CCDC93-206ENST00000470650 PHTF2Q8N3S3 785 aa10.19□□□□□ -0.78
CCDC93-206ENST00000470650 CLUAP1Q96AJ1 413 aa10.19□□□□□ -0.78
CCDC93-206ENST00000470650 FOXD4L5Q5VV16 416 aaPredicted RBP10.18□□□□□ -0.78
CCDC93-206ENST00000470650 OSBPL3Q9H4L5 887 aa10.18□□□□□ -0.78
CCDC93-206ENST00000470650 POM121CA8CG34 1229 aa10.17□□□□□ -0.78
CCDC93-206ENST00000470650 MEN1O00255 615 aa10.17□□□□□ -0.78
CCDC93-206ENST00000470650 SEMA3FQ13275 785 aa10.17□□□□□ -0.78
CCDC93-206ENST00000470650 SLFNL1Q499Z3 407 aa10.17□□□□□ -0.78
CCDC93-206ENST00000470650 RNF135Q8IUD6 432 aa10.17□□□□□ -0.78
CCDC93-206ENST00000470650 RNF217Q8TC41 542 aa10.17□□□□□ -0.78
CCDC93-206ENST00000470650 ZNF592Q92610 1267 aa10.17□□□□□ -0.78
CCDC93-206ENST00000470650 RAB6BQ9NRW1 208 aa10.17□□□□□ -0.78
CCDC93-206ENST00000470650 FHAD1B1AJZ9 1412 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms