RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 USP35Q9P2H5 1018 aa11.79□□□□□ -0.52
TGFBR3-206ENST00000470600 SCN11AQ9UI33 1791 aa11.79□□□□□ -0.52
TGFBR3-206ENST00000470600 EVA1CP58658 441 aa11.78□□□□□ -0.52
TGFBR3-206ENST00000470600 PTF1AQ7RTS3 328 aa11.78□□□□□ -0.52
TGFBR3-206ENST00000470600 NLRP2Q9NX02 1062 aa11.78□□□□□ -0.52
TGFBR3-206ENST00000470600 BTAF1O14981 1849 aa11.78□□□□□ -0.52
TGFBR3-206ENST00000470600 PAPPAQ13219 1627 aa11.78□□□□□ -0.52
TGFBR3-206ENST00000470600 DLG5Q8TDM6 1919 aa11.78□□□□□ -0.52
TGFBR3-206ENST00000470600 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.52
TGFBR3-206ENST00000470600 MRC1P22897 1456 aa11.77□□□□□ -0.52
TGFBR3-206ENST00000470600 RALBP1Q15311 655 aa11.77□□□□□ -0.53
TGFBR3-206ENST00000470600 FAM182BQ5T319 152 aa11.77□□□□□ -0.53
TGFBR3-206ENST00000470600 MYBBP1AQ9BQG0 1328 aaKnown RBP11.77□□□□□ -0.53
TGFBR3-206ENST00000470600 PPM1GO15355 546 aaPredicted RBP11.76□□□□□ -0.53
TGFBR3-206ENST00000470600 CYP27B1O15528 508 aa11.76□□□□□ -0.53
TGFBR3-206ENST00000470600 IL2RBP14784 551 aa11.76□□□□□ -0.53
TGFBR3-206ENST00000470600 LY75O60449 1722 aa11.76□□□□□ -0.53
TGFBR3-206ENST00000470600 NUP188Q5SRE5 1749 aa11.76□□□□□ -0.53
TGFBR3-206ENST00000470600 KRT27Q7Z3Y8 459 aa11.75□□□□□ -0.53
TGFBR3-206ENST00000470600 UPF1Q92900 1129 aaKnown RBP eCLIP11.75□□□□□ -0.53
TGFBR3-206ENST00000470600 RSPH6AQ9H0K4 717 aa11.75□□□□□ -0.53
TGFBR3-206ENST00000470600 CCDC9Q9Y3X0 531 aaKnown RBP11.75□□□□□ -0.53
TGFBR3-206ENST00000470600 CICQ96RK0 1608 aaPredicted RBP11.75□□□□□ -0.53
TGFBR3-206ENST00000470600 CSB-PGBD3P0DP91 1061 aa11.74□□□□□ -0.53
TGFBR3-206ENST00000470600 CNGB1Q14028 1251 aaPredicted RBP11.74□□□□□ -0.53
TGFBR3-206ENST00000470600 CDCA7Q9BWT1 371 aaPredicted RBP11.74□□□□□ -0.53
TGFBR3-206ENST00000470600 DIAPH1O60610 1272 aaKnown RBP11.73□□□□□ -0.53
TGFBR3-206ENST00000470600 PLEKHF1Q96S99 279 aa11.73□□□□□ -0.53
TGFBR3-206ENST00000470600 UBR2Q8IWV8 1755 aa11.72□□□□□ -0.53
TGFBR3-206ENST00000470600 SOCS7O14512 581 aa11.72□□□□□ -0.53
TGFBR3-206ENST00000470600 NKX1-1Q15270 411 aaPredicted RBP11.72□□□□□ -0.53
TGFBR3-206ENST00000470600 DDB1Q16531 1140 aa11.72□□□□□ -0.53
TGFBR3-206ENST00000470600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.72□□□□□ -0.53
TGFBR3-206ENST00000470600 SRCAPQ6ZRS2 3230 aa11.71□□□□□ -0.53
TGFBR3-206ENST00000470600 SULT6B1Q6IMI4 303 aa11.71□□□□□ -0.53
TGFBR3-206ENST00000470600 ZNF831Q5JPB2 1677 aa11.71□□□□□ -0.54
TGFBR3-206ENST00000470600 PHACTR3Q96KR7 559 aa11.7□□□□□ -0.54
TGFBR3-206ENST00000470600 TAF1LQ8IZX4 1826 aa11.7□□□□□ -0.54
TGFBR3-206ENST00000470600 TUBGCP6Q96RT7 1819 aa11.7□□□□□ -0.54
TGFBR3-206ENST00000470600 KCNQ2O43526 872 aa11.69□□□□□ -0.54
TGFBR3-206ENST00000470600 HMOX1P09601 288 aa11.69□□□□□ -0.54
TGFBR3-206ENST00000470600 PHKG2P15735 406 aa11.69□□□□□ -0.54
TGFBR3-206ENST00000470600 ZCRB1Q8TBF4 217 aaKnown RBP11.69□□□□□ -0.54
TGFBR3-206ENST00000470600 CEMIPQ8WUJ3 1361 aa11.68□□□□□ -0.54
TGFBR3-206ENST00000470600 COL5A3P25940 1745 aaPredicted RBP11.68□□□□□ -0.54
TGFBR3-206ENST00000470600 TJP1Q07157 1748 aa11.68□□□□□ -0.54
TGFBR3-206ENST00000470600 KDM3BQ7LBC6 1761 aa11.67□□□□□ -0.54
TGFBR3-206ENST00000470600 PCDH11XQ9BZA7 1347 aa11.67□□□□□ -0.54
TGFBR3-206ENST00000470600 PCDH11YQ9BZA8 1340 aa11.67□□□□□ -0.54
TGFBR3-206ENST00000470600 KCPQ6ZWJ8 1503 aa11.67□□□□□ -0.54
TGFBR3-206ENST00000470600 EXOC5O00471 708 aa11.67□□□□□ -0.54
TGFBR3-206ENST00000470600 TATP17735 454 aaPredicted RBP11.67□□□□□ -0.54
TGFBR3-206ENST00000470600 MTHFSDQ2M296 383 aaKnown RBP11.67□□□□□ -0.54
TGFBR3-206ENST00000470600 RAPGEF4Q8WZA2 1011 aa11.67□□□□□ -0.54
TGFBR3-206ENST00000470600 FAM196AQ6ZSG2 479 aa11.66□□□□□ -0.54
TGFBR3-206ENST00000470600 PROM2Q8N271 834 aa11.66□□□□□ -0.54
TGFBR3-206ENST00000470600 PRKAR2BP31323 418 aa11.65□□□□□ -0.54
TGFBR3-206ENST00000470600 PNISRQ8TF01 805 aaKnown RBP11.65□□□□□ -0.54
TGFBR3-206ENST00000470600 QSER1Q2KHR3 1735 aa11.65□□□□□ -0.54
TGFBR3-206ENST00000470600 FCHSD2O94868 740 aa11.64□□□□□ -0.55
TGFBR3-206ENST00000470600 TRIM37O94972 964 aa11.64□□□□□ -0.55
TGFBR3-206ENST00000470600 PDE3BQ13370 1112 aa11.64□□□□□ -0.55
TGFBR3-206ENST00000470600 DEFB132Q7Z7B7 95 aa11.64□□□□□ -0.55
TGFBR3-206ENST00000470600 CAMKK2Q96RR4 588 aa11.64□□□□□ -0.55
TGFBR3-206ENST00000470600 CASZ1Q86V15 1759 aa11.64□□□□□ -0.55
TGFBR3-206ENST00000470600 C5P01031 1676 aa11.63□□□□□ -0.55
TGFBR3-206ENST00000470600 DDX54Q8TDD1 881 aaKnown RBP11.63□□□□□ -0.55
TGFBR3-206ENST00000470600 CFAP53Q96M91 514 aa11.63□□□□□ -0.55
TGFBR3-206ENST00000470600 BCL11BQ9C0K0 894 aaPredicted RBP11.63□□□□□ -0.55
TGFBR3-206ENST00000470600 ADAMTS8Q9UP79 889 aa11.63□□□□□ -0.55
TGFBR3-206ENST00000470600 COL24A1Q17RW2 1714 aa11.63□□□□□ -0.55
TGFBR3-206ENST00000470600 MYH14Q7Z406 1995 aaKnown RBP11.62□□□□□ -0.55
TGFBR3-206ENST00000470600 A0A0G2JS52 829 aa11.62□□□□□ -0.55
TGFBR3-206ENST00000470600 U2SURPO15042 1029 aaKnown RBP11.62□□□□□ -0.55
TGFBR3-206ENST00000470600 MYT1Q01538 1121 aa11.62□□□□□ -0.55
TGFBR3-206ENST00000470600 AMOTQ4VCS5 1084 aa11.62□□□□□ -0.55
TGFBR3-206ENST00000470600 ZNF530Q6P9A1 599 aaPredicted RBP11.62□□□□□ -0.55
TGFBR3-206ENST00000470600 IFNL2Q8IZJ0 200 aa11.62□□□□□ -0.55
TGFBR3-206ENST00000470600 IL17REQ8NFR9 667 aa11.62□□□□□ -0.55
TGFBR3-206ENST00000470600 ACSBG1Q96GR2 724 aa11.62□□□□□ -0.55
TGFBR3-206ENST00000470600 LGR6Q9HBX8 967 aa11.62□□□□□ -0.55
TGFBR3-206ENST00000470600 MAP3K5Q99683 1374 aa11.62□□□□□ -0.55
TGFBR3-206ENST00000470600 U2AF1L5P0DN76 240 aaPredicted RBP11.61□□□□□ -0.55
TGFBR3-206ENST00000470600 U2AF1Q01081 240 aaKnown RBP eCLIP11.61□□□□□ -0.55
TGFBR3-206ENST00000470600 AKAP4Q5JQC9 854 aa11.61□□□□□ -0.55
TGFBR3-206ENST00000470600 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
TGFBR3-206ENST00000470600 SPG7Q9UQ90 795 aa11.61□□□□□ -0.55
TGFBR3-206ENST00000470600 UBR3Q6ZT12 1888 aa11.61□□□□□ -0.55
TGFBR3-206ENST00000470600 PLSCR1O15162 318 aa11.6□□□□□ -0.55
TGFBR3-206ENST00000470600 RNMTO43148 476 aaKnown RBP11.6□□□□□ -0.55
TGFBR3-206ENST00000470600 PRIM1P49642 420 aaKnown RBP11.6□□□□□ -0.55
TGFBR3-206ENST00000470600 PLEKHO1Q53GL0 409 aaPredicted RBP11.6□□□□□ -0.55
TGFBR3-206ENST00000470600 PIGBQ92521 554 aa11.6□□□□□ -0.55
TGFBR3-206ENST00000470600 LRRC4BQ9NT99 713 aa11.6□□□□□ -0.55
TGFBR3-206ENST00000470600 KAT6BQ8WYB5 2073 aa11.59□□□□□ -0.55
TGFBR3-206ENST00000470600 CCDC125Q86Z20 511 aa11.59□□□□□ -0.55
TGFBR3-206ENST00000470600 TRIM35Q9UPQ4 493 aa11.59□□□□□ -0.55
TGFBR3-206ENST00000470600 C4BP0C0L5 1744 aa11.58□□□□□ -0.56
TGFBR3-206ENST00000470600 ANP32CO43423 234 aa11.58□□□□□ -0.56
TGFBR3-206ENST00000470600 EN1Q05925 392 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms