RNA–Protein interactions for RNA: ENST00000470347.1

SYPL1-205, Transcript of synaptophysin like 1, humanhuman

TSL 3 BASIC

Gene SYPL1, Length 1,193 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-205ENST00000470347 CUX1P39880 1505 aa10.66□□□□□ -0.7
SYPL1-205ENST00000470347 MAGI1Q96QZ7 1491 aaPredicted RBP10.66□□□□□ -0.7
SYPL1-205ENST00000470347 SOGA1O94964 1423 aa10.66□□□□□ -0.7
SYPL1-205ENST00000470347 CTSOP43234 321 aaPredicted RBP10.65□□□□□ -0.7
SYPL1-205ENST00000470347 CYB5RLQ6IPT4 315 aa10.65□□□□□ -0.7
SYPL1-205ENST00000470347 PROCA1Q8NCQ7 364 aaPredicted RBP10.65□□□□□ -0.7
SYPL1-205ENST00000470347 AGBL1Q96MI9 1066 aa10.65□□□□□ -0.7
SYPL1-205ENST00000470347 TDRD9Q8NDG6 1382 aaKnown RBP10.65□□□□□ -0.71
SYPL1-205ENST00000470347 LOC100996750A0A140TA64 210 aa10.64□□□□□ -0.71
SYPL1-205ENST00000470347 RNFT1Q5M7Z0 435 aa10.64□□□□□ -0.71
SYPL1-205ENST00000470347 ADAM32Q8TC27 787 aa10.64□□□□□ -0.71
SYPL1-205ENST00000470347 KRTAP4-6Q9BYQ5 205 aa10.64□□□□□ -0.71
SYPL1-205ENST00000470347 ADAMTS8Q9UP79 889 aa10.64□□□□□ -0.71
SYPL1-205ENST00000470347 PBRM1Q86U86 1689 aa10.63□□□□□ -0.71
SYPL1-205ENST00000470347 ITGA6P23229 1130 aa10.63□□□□□ -0.71
SYPL1-205ENST00000470347 RELBQ01201 579 aa10.63□□□□□ -0.71
SYPL1-205ENST00000470347 INSM2Q96T92 566 aaPredicted RBP10.63□□□□□ -0.71
SYPL1-205ENST00000470347 GRIN2BQ13224 1484 aa10.62□□□□□ -0.71
SYPL1-205ENST00000470347 SYNJ2O15056 1496 aa10.61□□□□□ -0.71
SYPL1-205ENST00000470347 NBPF20Q3BBV1 942 aa10.61□□□□□ -0.71
SYPL1-205ENST00000470347 ZNF385CQ66K41 422 aaPredicted RBP10.61□□□□□ -0.71
SYPL1-205ENST00000470347 RNF217Q8TC41 542 aa10.61□□□□□ -0.71
SYPL1-205ENST00000470347 TMPRSS4Q9NRS4 437 aa10.61□□□□□ -0.71
SYPL1-205ENST00000470347 ABCA5Q8WWZ7 1642 aa10.6□□□□□ -0.71
SYPL1-205ENST00000470347 AP1G2O75843 785 aa10.6□□□□□ -0.71
SYPL1-205ENST00000470347 SLURP2P0DP57 97 aa10.6□□□□□ -0.71
SYPL1-205ENST00000470347 VWA5B2Q8N398 1253 aa10.6□□□□□ -0.71
SYPL1-205ENST00000470347 KCTD17Q8N5Z5 321 aa10.6□□□□□ -0.71
SYPL1-205ENST00000470347 EPS8L1Q8TE68 723 aa10.6□□□□□ -0.71
SYPL1-205ENST00000470347 DDRGK1Q96HY6 314 aa10.6□□□□□ -0.71
SYPL1-205ENST00000470347 KDM4CQ9H3R0 1056 aa10.6□□□□□ -0.71
SYPL1-205ENST00000470347 POLMQ9NP87 494 aaPredicted RBP10.6□□□□□ -0.71
SYPL1-205ENST00000470347 SENP3-EIF4A1A0A087X0R7 540 aa10.59□□□□□ -0.71
SYPL1-205ENST00000470347 RNF225M0QZC1 329 aaPredicted RBP10.59□□□□□ -0.71
SYPL1-205ENST00000470347 RASSF7Q02833 373 aa10.59□□□□□ -0.71
SYPL1-205ENST00000470347 SV2AQ7L0J3 742 aa10.59□□□□□ -0.71
SYPL1-205ENST00000470347 TMEM151AQ8N4L1 468 aa10.59□□□□□ -0.71
SYPL1-205ENST00000470347 ZNF784Q8NCA9 323 aaPredicted RBP10.59□□□□□ -0.71
SYPL1-205ENST00000470347 FAM117AQ9C073 453 aa10.59□□□□□ -0.71
SYPL1-205ENST00000470347 ZNF395Q9H8N7 513 aaPredicted RBP10.59□□□□□ -0.71
SYPL1-205ENST00000470347 LILRA1O75019 489 aa10.58□□□□□ -0.72
SYPL1-205ENST00000470347 GDF11O95390 407 aa10.58□□□□□ -0.72
SYPL1-205ENST00000470347 GPBP1L1Q9HC44 474 aaPredicted RBP10.58□□□□□ -0.72
SYPL1-205ENST00000470347 CDC14CA4D256 554 aa10.57□□□□□ -0.72
SYPL1-205ENST00000470347 ADH1AP07327 375 aa10.57□□□□□ -0.72
SYPL1-205ENST00000470347 ADD1P35611 737 aaKnown RBP10.57□□□□□ -0.72
SYPL1-205ENST00000470347 SVOPQ8N4V2 548 aa10.57□□□□□ -0.72
SYPL1-205ENST00000470347 KDF1Q8NAX2 398 aaPredicted RBP10.57□□□□□ -0.72
SYPL1-205ENST00000470347 HMX1Q9NP08 348 aaPredicted RBP10.57□□□□□ -0.72
SYPL1-205ENST00000470347 ABCA10Q8WWZ4 1543 aa10.57□□□□□ -0.72
SYPL1-205ENST00000470347 ERVH48-1M5A8F1 160 aa10.56□□□□□ -0.72
SYPL1-205ENST00000470347 SUZ12Q15022 739 aaKnown RBP10.56□□□□□ -0.72
SYPL1-205ENST00000470347 PNMA1Q8ND90 353 aa10.56□□□□□ -0.72
SYPL1-205ENST00000470347 WHAMMQ8TF30 809 aa10.56□□□□□ -0.72
SYPL1-205ENST00000470347 GAPVD1Q14C86 1478 aa10.55□□□□□ -0.72
SYPL1-205ENST00000470347 ESPNB1AK53 854 aa10.55□□□□□ -0.72
SYPL1-205ENST00000470347 ARHGEF15O94989 841 aa10.55□□□□□ -0.72
SYPL1-205ENST00000470347 FOXD4L5Q5VV16 416 aaPredicted RBP10.55□□□□□ -0.72
SYPL1-205ENST00000470347 CHMP7Q8WUX9 453 aaPredicted RBP10.55□□□□□ -0.72
SYPL1-205ENST00000470347 ATP1B4Q9UN42 357 aaPredicted RBP10.55□□□□□ -0.72
SYPL1-205ENST00000470347 USP17L8P0C7I0 530 aa10.54□□□□□ -0.72
SYPL1-205ENST00000470347 PTGIRP43119 386 aa10.54□□□□□ -0.72
SYPL1-205ENST00000470347 ADAMTS12P58397 1594 aa10.54□□□□□ -0.72
SYPL1-205ENST00000470347 RAB15P59190 212 aa10.54□□□□□ -0.72
SYPL1-205ENST00000470347 DZIP3Q86Y13 1208 aaKnown RBP10.54□□□□□ -0.72
SYPL1-205ENST00000470347 SEPT12Q8IYM1 358 aa10.52□□□□□ -0.73
SYPL1-205ENST00000470347 GRIN2AQ12879 1464 aa10.5□□□□□ -0.73
SYPL1-205ENST00000470347 LYSMD3Q7Z3D4 306 aa10.5□□□□□ -0.73
SYPL1-205ENST00000470347 BIVM-ERCC5R4GMW8 1640 aa10.5□□□□□ -0.73
SYPL1-205ENST00000470347 ERCC6L2Q5T890 1561 aa10.49□□□□□ -0.73
SYPL1-205ENST00000470347 ADAMTS2O95450 1211 aa10.49□□□□□ -0.73
SYPL1-205ENST00000470347 RFC5P40937 340 aa10.49□□□□□ -0.73
SYPL1-205ENST00000470347 CUEDC1Q9NWM3 386 aaPredicted RBP10.49□□□□□ -0.73
SYPL1-205ENST00000470347 CEP170Q5SW79 1584 aa10.48□□□□□ -0.73
SYPL1-205ENST00000470347 RNF144AP50876 292 aaPredicted RBP10.48□□□□□ -0.73
SYPL1-205ENST00000470347 SRSF11Q05519 484 aaKnown RBP10.48□□□□□ -0.73
SYPL1-205ENST00000470347 TRIM34Q9BYJ4 488 aa10.48□□□□□ -0.73
SYPL1-205ENST00000470347 NUP160Q12769 1436 aa10.48□□□□□ -0.73
SYPL1-205ENST00000470347 TOP2BQ02880 1626 aa10.47□□□□□ -0.73
SYPL1-205ENST00000470347 SHROOM2Q13796 1616 aa10.47□□□□□ -0.73
SYPL1-205ENST00000470347 GAS6Q14393 721 aa10.47□□□□□ -0.73
SYPL1-205ENST00000470347 BCANQ96GW7 911 aa10.47□□□□□ -0.73
SYPL1-205ENST00000470347 LYPD4Q6UWN0 246 aa10.46□□□□□ -0.73
SYPL1-205ENST00000470347 TRIM52Q96A61 297 aa10.46□□□□□ -0.73
SYPL1-205ENST00000470347 CYLDQ9NQC7 956 aa10.46□□□□□ -0.73
SYPL1-205ENST00000470347 DNMT3AQ9Y6K1 912 aaPredicted RBP10.46□□□□□ -0.73
SYPL1-205ENST00000470347 WRNQ14191 1432 aaPredicted RBP eCLIP10.45□□□□□ -0.74
SYPL1-205ENST00000470347 IRS1P35568 1242 aa10.45□□□□□ -0.74
SYPL1-205ENST00000470347 MARSP56192 900 aaKnown RBP10.45□□□□□ -0.74
SYPL1-205ENST00000470347 PRICKLE2Q7Z3G6 844 aa10.45□□□□□ -0.74
SYPL1-205ENST00000470347 KANK3Q6NY19 840 aa10.44□□□□□ -0.74
SYPL1-205ENST00000470347 SCARF2Q96GP6 870 aaPredicted RBP10.44□□□□□ -0.74
SYPL1-205ENST00000470347 GMCL1Q96IK5 515 aa10.44□□□□□ -0.74
SYPL1-205ENST00000470347 ERICH3Q5RHP9 1530 aa10.43□□□□□ -0.74
SYPL1-205ENST00000470347 ATP5J2-PTCD1G3V325 749 aa10.43□□□□□ -0.74
SYPL1-205ENST00000470347 GPC1P35052 558 aa10.43□□□□□ -0.74
SYPL1-205ENST00000470347 GOPCQ9HD26 462 aa10.43□□□□□ -0.74
SYPL1-205ENST00000470347 FHAD1B1AJZ9 1412 aa10.42□□□□□ -0.74
SYPL1-205ENST00000470347 ZBBXA8MT70 800 aa10.42□□□□□ -0.74
SYPL1-205ENST00000470347 GIGYF1O75420 1035 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms