RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 EIF4A2Q14240 407 aaKnown RBP20.16■□□□□ 0.82
CDC42SE1-203ENST00000470278 LTV1Q96GA3 475 aaPredicted RBP20.16■□□□□ 0.82
CDC42SE1-203ENST00000470278 NLRP2Q9NX02 1062 aa20.15■□□□□ 0.82
CDC42SE1-203ENST00000470278 MYBBP1AQ9BQG0 1328 aaKnown RBP20.15■□□□□ 0.82
CDC42SE1-203ENST00000470278 BCL9O00512 1426 aa20.14■□□□□ 0.81
CDC42SE1-203ENST00000470278 PLEKHG2Q9H7P9 1386 aa20.13■□□□□ 0.81
CDC42SE1-203ENST00000470278 CDCA7Q9BWT1 371 aaPredicted RBP20.13■□□□□ 0.81
CDC42SE1-203ENST00000470278 IGSF1Q8N6C5 1336 aa20.12■□□□□ 0.81
CDC42SE1-203ENST00000470278 IL13P35225 146 aa20.12■□□□□ 0.81
CDC42SE1-203ENST00000470278 NBPF6Q5VWK0 638 aa20.12■□□□□ 0.81
CDC42SE1-203ENST00000470278 NBPF4Q96M43 638 aa20.12■□□□□ 0.81
CDC42SE1-203ENST00000470278 ANO8Q9HCE9 1232 aaPredicted RBP20.12■□□□□ 0.81
CDC42SE1-203ENST00000470278 NHSQ6T4R5 1651 aa20.12■□□□□ 0.81
CDC42SE1-203ENST00000470278 MARCH10Q8NA82 808 aaPredicted RBP20.11■□□□□ 0.81
CDC42SE1-203ENST00000470278 CFAP53Q96M91 514 aa20.11■□□□□ 0.81
CDC42SE1-203ENST00000470278 KDRP35968 1356 aa20.1■□□□□ 0.81
CDC42SE1-203ENST00000470278 EYA1Q99502 592 aa20.1■□□□□ 0.81
CDC42SE1-203ENST00000470278 MEGF6O75095 1541 aa20.1■□□□□ 0.81
CDC42SE1-203ENST00000470278 TNS2Q63HR2 1409 aa20.1■□□□□ 0.81
CDC42SE1-203ENST00000470278 PAPPAQ13219 1627 aa20.09■□□□□ 0.81
CDC42SE1-203ENST00000470278 DIAPH1O60610 1272 aaKnown RBP20.09■□□□□ 0.81
CDC42SE1-203ENST00000470278 PKD1L3Q7Z443 1732 aa20.09■□□□□ 0.81
CDC42SE1-203ENST00000470278 IL2RBP14784 551 aa20.08■□□□□ 0.81
CDC42SE1-203ENST00000470278 PROM2Q8N271 834 aa20.08■□□□□ 0.81
CDC42SE1-203ENST00000470278 SHANK3Q9BYB0 1731 aa20.07■□□□□ 0.8
CDC42SE1-203ENST00000470278 BTAF1O14981 1849 aa20.06■□□□□ 0.8
CDC42SE1-203ENST00000470278 ANP32CO43423 234 aa20.06■□□□□ 0.8
CDC42SE1-203ENST00000470278 DDB1Q16531 1140 aa20.06■□□□□ 0.8
CDC42SE1-203ENST00000470278 USHBP1Q8N6Y0 703 aa20.06■□□□□ 0.8
CDC42SE1-203ENST00000470278 PDGFDQ9GZP0 370 aaPredicted RBP20.06■□□□□ 0.8
CDC42SE1-203ENST00000470278 PLSCR1O15162 318 aa20.05■□□□□ 0.8
CDC42SE1-203ENST00000470278 RAPGEF4Q8WZA2 1011 aa20.03■□□□□ 0.8
CDC42SE1-203ENST00000470278 BCL11BQ9C0K0 894 aaPredicted RBP20.03■□□□□ 0.8
CDC42SE1-203ENST00000470278 NUDCQ9Y266 331 aa20.02■□□□□ 0.8
CDC42SE1-203ENST00000470278 TUBGCP6Q96RT7 1819 aa20■□□□□ 0.79
CDC42SE1-203ENST00000470278 TATP17735 454 aaPredicted RBP20■□□□□ 0.79
CDC42SE1-203ENST00000470278 SULT6B1Q6IMI4 303 aa20■□□□□ 0.79
CDC42SE1-203ENST00000470278 KCNQ2O43526 872 aa19.99■□□□□ 0.79
CDC42SE1-203ENST00000470278 NBPF14Q5TI25 921 aa19.99■□□□□ 0.79
CDC42SE1-203ENST00000470278 AEBP1Q8IUX7 1158 aa19.99■□□□□ 0.79
CDC42SE1-203ENST00000470278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.99■□□□□ 0.79
CDC42SE1-203ENST00000470278 EXOC5O00471 708 aa19.98■□□□□ 0.79
CDC42SE1-203ENST00000470278 U2SURPO15042 1029 aaKnown RBP19.98■□□□□ 0.79
CDC42SE1-203ENST00000470278 UTRNP46939 3433 aa19.97■□□□□ 0.79
CDC42SE1-203ENST00000470278 COL24A1Q17RW2 1714 aa19.97■□□□□ 0.79
CDC42SE1-203ENST00000470278 SPON1Q9HCB6 807 aa19.97■□□□□ 0.79
CDC42SE1-203ENST00000470278 KAT6BQ8WYB5 2073 aa19.96■□□□□ 0.79
CDC42SE1-203ENST00000470278 ZCRB1Q8TBF4 217 aaKnown RBP19.96■□□□□ 0.79
CDC42SE1-203ENST00000470278 PCDH11XQ9BZA7 1347 aa19.96■□□□□ 0.79
CDC42SE1-203ENST00000470278 PCDH11YQ9BZA8 1340 aa19.96■□□□□ 0.79
CDC42SE1-203ENST00000470278 QSER1Q2KHR3 1735 aa19.96■□□□□ 0.79
CDC42SE1-203ENST00000470278 DIEXFQ68CQ4 756 aaKnown RBP19.95■□□□□ 0.78
CDC42SE1-203ENST00000470278 DOT1LQ8TEK3 1739 aa19.94■□□□□ 0.78
CDC42SE1-203ENST00000470278 HMOX1P09601 288 aa19.94■□□□□ 0.78
CDC42SE1-203ENST00000470278 U2AF1L5P0DN76 240 aaPredicted RBP19.94■□□□□ 0.78
CDC42SE1-203ENST00000470278 PTGER2P43116 358 aa19.94■□□□□ 0.78
CDC42SE1-203ENST00000470278 U2AF1Q01081 240 aaKnown RBP eCLIP19.94■□□□□ 0.78
CDC42SE1-203ENST00000470278 TXNRD1Q16881 649 aa19.94■□□□□ 0.78
CDC42SE1-203ENST00000470278 AMOTQ4VCS5 1084 aa19.94■□□□□ 0.78
CDC42SE1-203ENST00000470278 RSPH6AQ9H0K4 717 aa19.94■□□□□ 0.78
CDC42SE1-203ENST00000470278 FCHSD2O94868 740 aa19.93■□□□□ 0.78
CDC42SE1-203ENST00000470278 SPG7Q9UQ90 795 aa19.93■□□□□ 0.78
CDC42SE1-203ENST00000470278 LY75O60449 1722 aa19.92■□□□□ 0.78
CDC42SE1-203ENST00000470278 SGIP1Q9BQI5 828 aa19.91■□□□□ 0.78
CDC42SE1-203ENST00000470278 PLEKHO1Q53GL0 409 aaPredicted RBP19.9■□□□□ 0.78
CDC42SE1-203ENST00000470278 TOGARAM1Q9Y4F4 1720 aa19.9■□□□□ 0.78
CDC42SE1-203ENST00000470278 CYP27B1O15528 508 aa19.89■□□□□ 0.77
CDC42SE1-203ENST00000470278 ZBTB7AO95365 584 aa19.89■□□□□ 0.77
CDC42SE1-203ENST00000470278 PRKAR2BP31323 418 aa19.89■□□□□ 0.77
CDC42SE1-203ENST00000470278 ADAMTS7Q9UKP4 1686 aa19.89■□□□□ 0.77
CDC42SE1-203ENST00000470278 WDR43Q15061 677 aaKnown RBP eCLIP19.88■□□□□ 0.77
CDC42SE1-203ENST00000470278 CCDC184Q52MB2 194 aa19.88■□□□□ 0.77
CDC42SE1-203ENST00000470278 DDX54Q8TDD1 881 aaKnown RBP19.88■□□□□ 0.77
CDC42SE1-203ENST00000470278 PHKG2P15735 406 aa19.87■□□□□ 0.77
CDC42SE1-203ENST00000470278 NKX1-1Q15270 411 aaPredicted RBP19.87■□□□□ 0.77
CDC42SE1-203ENST00000470278 SLC15A2Q16348 729 aa19.87■□□□□ 0.77
CDC42SE1-203ENST00000470278 IFNL2Q8IZJ0 200 aa19.87■□□□□ 0.77
CDC42SE1-203ENST00000470278 ACSBG1Q96GR2 724 aa19.87■□□□□ 0.77
CDC42SE1-203ENST00000470278 PNNQ9H307 717 aaKnown RBP19.87■□□□□ 0.77
CDC42SE1-203ENST00000470278 MRS2Q9HD23 443 aa19.87■□□□□ 0.77
CDC42SE1-203ENST00000470278 PLEKHF1Q96S99 279 aa19.86■□□□□ 0.77
CDC42SE1-203ENST00000470278 CHD4Q14839 1912 aa19.86■□□□□ 0.77
CDC42SE1-203ENST00000470278 ZNF827Q17R98 1081 aa19.85■□□□□ 0.77
CDC42SE1-203ENST00000470278 ZNF530Q6P9A1 599 aaPredicted RBP19.85■□□□□ 0.77
CDC42SE1-203ENST00000470278 GAS2L2Q8NHY3 880 aa19.85■□□□□ 0.77
CDC42SE1-203ENST00000470278 LRRC4BQ9NT99 713 aa19.85■□□□□ 0.77
CDC42SE1-203ENST00000470278 PPP1R1BQ9UD71 204 aaPredicted RBP19.85■□□□□ 0.77
CDC42SE1-203ENST00000470278 SCN11AQ9UI33 1791 aa19.85■□□□□ 0.77
CDC42SE1-203ENST00000470278 CCER2I3L3R5 266 aa19.84■□□□□ 0.77
CDC42SE1-203ENST00000470278 YY1P25490 414 aa19.84■□□□□ 0.77
CDC42SE1-203ENST00000470278 MTHFSDQ2M296 383 aaKnown RBP19.84■□□□□ 0.77
CDC42SE1-203ENST00000470278 GOLGB1Q14789 3259 aaKnown RBP19.84■□□□□ 0.77
CDC42SE1-203ENST00000470278 VIRMAQ69YN4 1812 aaKnown RBP19.83■□□□□ 0.77
CDC42SE1-203ENST00000470278 HSP90AB1P08238 724 aaKnown RBP19.83■□□□□ 0.77
CDC42SE1-203ENST00000470278 AKAP4Q5JQC9 854 aa19.83■□□□□ 0.77
CDC42SE1-203ENST00000470278 C1orf141Q5JVX7 400 aa19.83■□□□□ 0.77
CDC42SE1-203ENST00000470278 PNISRQ8TF01 805 aaKnown RBP19.83■□□□□ 0.77
CDC42SE1-203ENST00000470278 PHACTR3Q96KR7 559 aa19.83■□□□□ 0.77
CDC42SE1-203ENST00000470278 ATF5Q9Y2D1 282 aaPredicted RBP19.83■□□□□ 0.77
CDC42SE1-203ENST00000470278 KDM6AO15550 1401 aaPredicted RBP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms