RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 TRPC5Q9UL62 973 aaPredicted RBP14.89□□□□□ -0.03
SREBF1-209ENST00000470247 RRP7AQ9Y3A4 280 aaKnown RBP14.89□□□□□ -0.03
SREBF1-209ENST00000470247 OVOS2A0A0G2JMS6 1433 aa14.89□□□□□ -0.03
SREBF1-209ENST00000470247 PLEKHG2Q9H7P9 1386 aa14.88□□□□□ -0.03
SREBF1-209ENST00000470247 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
SREBF1-209ENST00000470247 PLEKHO1Q53GL0 409 aaPredicted RBP14.88□□□□□ -0.03
SREBF1-209ENST00000470247 CCDC9Q9Y3X0 531 aaKnown RBP14.88□□□□□ -0.03
SREBF1-209ENST00000470247 MAPK8IP3Q9UPT6 1336 aa14.88□□□□□ -0.03
SREBF1-209ENST00000470247 ONECUT3O60422 494 aaPredicted RBP14.87□□□□□ -0.03
SREBF1-209ENST00000470247 HNRNPUQ00839 825 aaKnown RBP eCLIP14.87□□□□□ -0.03
SREBF1-209ENST00000470247 AMOTQ4VCS5 1084 aa14.87□□□□□ -0.03
SREBF1-209ENST00000470247 TRIM35Q9UPQ4 493 aa14.87□□□□□ -0.03
SREBF1-209ENST00000470247 GLI3P10071 1580 aa14.86□□□□□ -0.03
SREBF1-209ENST00000470247 RIPK4P57078 832 aa14.86□□□□□ -0.03
SREBF1-209ENST00000470247 ZNF772Q68DY9 489 aaPredicted RBP14.86□□□□□ -0.03
SREBF1-209ENST00000470247 GAS2L2Q8NHY3 880 aa14.86□□□□□ -0.03
SREBF1-209ENST00000470247 ZCRB1Q8TBF4 217 aaKnown RBP14.86□□□□□ -0.03
SREBF1-209ENST00000470247 CYP27B1O15528 508 aa14.85□□□□□ -0.03
SREBF1-209ENST00000470247 NEUROD2Q15784 382 aa14.85□□□□□ -0.03
SREBF1-209ENST00000470247 FAM98CQ17RN3 349 aaKnown RBP14.85□□□□□ -0.03
SREBF1-209ENST00000470247 CCDC27Q2M243 656 aa14.85□□□□□ -0.03
SREBF1-209ENST00000470247 YTHDC1Q96MU7 727 aaKnown RBP14.85□□□□□ -0.03
SREBF1-209ENST00000470247 CDCA7Q9BWT1 371 aaPredicted RBP14.85□□□□□ -0.03
SREBF1-209ENST00000470247 SALL2Q9Y467 1007 aaPredicted RBP14.85□□□□□ -0.03
SREBF1-209ENST00000470247 ZNF521Q96K83 1311 aa14.85□□□□□ -0.03
SREBF1-209ENST00000470247 NEFMP07197 916 aa14.84□□□□□ -0.03
SREBF1-209ENST00000470247 ZNF530Q6P9A1 599 aaPredicted RBP14.84□□□□□ -0.03
SREBF1-209ENST00000470247 NGEFQ8N5V2 710 aa14.84□□□□□ -0.03
SREBF1-209ENST00000470247 SPG7Q9UQ90 795 aa14.84□□□□□ -0.03
SREBF1-209ENST00000470247 PHKG2P15735 406 aa14.83□□□□□ -0.04
SREBF1-209ENST00000470247 POTEAQ6S8J7 498 aa14.83□□□□□ -0.04
SREBF1-209ENST00000470247 WWC1Q8IX03 1113 aa14.83□□□□□ -0.04
SREBF1-209ENST00000470247 PKD1L3Q7Z443 1732 aa14.83□□□□□ -0.04
SREBF1-209ENST00000470247 EXOC5O00471 708 aa14.82□□□□□ -0.04
SREBF1-209ENST00000470247 HTATSF1O43719 755 aaKnown RBP14.82□□□□□ -0.04
SREBF1-209ENST00000470247 AKAP4Q5JQC9 854 aa14.82□□□□□ -0.04
SREBF1-209ENST00000470247 IL17REQ8NFR9 667 aa14.82□□□□□ -0.04
SREBF1-209ENST00000470247 PARP4Q9UKK3 1724 aaKnown RBP14.81□□□□□ -0.04
SREBF1-209ENST00000470247 GNAT3A8MTJ3 354 aa14.81□□□□□ -0.04
SREBF1-209ENST00000470247 RBM6P78332 1123 aaKnown RBP14.81□□□□□ -0.04
SREBF1-209ENST00000470247 DCTN1Q14203 1278 aa14.81□□□□□ -0.04
SREBF1-209ENST00000470247 NKX1-1Q15270 411 aaPredicted RBP14.81□□□□□ -0.04
SREBF1-209ENST00000470247 IFNL2Q8IZJ0 200 aa14.81□□□□□ -0.04
SREBF1-209ENST00000470247 LGR6Q9HBX8 967 aa14.81□□□□□ -0.04
SREBF1-209ENST00000470247 ZBED9Q6R2W3 1325 aa14.81□□□□□ -0.04
SREBF1-209ENST00000470247 WNK3Q9BYP7 1800 aa14.8□□□□□ -0.04
SREBF1-209ENST00000470247 DDB1Q16531 1140 aa14.8□□□□□ -0.04
SREBF1-209ENST00000470247 DDX54Q8TDD1 881 aaKnown RBP14.8□□□□□ -0.04
SREBF1-209ENST00000470247 THUMPD2Q9BTF0 503 aaKnown RBP14.8□□□□□ -0.04
SREBF1-209ENST00000470247 MAP3K5Q99683 1374 aa14.8□□□□□ -0.04
SREBF1-209ENST00000470247 THSD7AQ9UPZ6 1657 aa14.8□□□□□ -0.04
SREBF1-209ENST00000470247 SHANK3Q9BYB0 1731 aa14.8□□□□□ -0.04
SREBF1-209ENST00000470247 RNMTO43148 476 aaKnown RBP14.79□□□□□ -0.04
SREBF1-209ENST00000470247 TNS2Q63HR2 1409 aa14.79□□□□□ -0.04
SREBF1-209ENST00000470247 MPRIPQ6WCQ1 1025 aa14.79□□□□□ -0.04
SREBF1-209ENST00000470247 MCM10Q7L590 875 aa14.79□□□□□ -0.04
SREBF1-209ENST00000470247 SEPT12Q8IYM1 358 aa14.79□□□□□ -0.04
SREBF1-209ENST00000470247 MARCH10Q8NA82 808 aaPredicted RBP14.79□□□□□ -0.04
SREBF1-209ENST00000470247 DLG5Q8TDM6 1919 aa14.79□□□□□ -0.04
SREBF1-209ENST00000470247 PCDH11XQ9BZA7 1347 aa14.79□□□□□ -0.04
SREBF1-209ENST00000470247 PCDH11YQ9BZA8 1340 aa14.79□□□□□ -0.04
SREBF1-209ENST00000470247 SPINK5Q9NQ38 1064 aaPredicted RBP14.79□□□□□ -0.04
SREBF1-209ENST00000470247 KDM6AO15550 1401 aaPredicted RBP14.78□□□□□ -0.04
SREBF1-209ENST00000470247 CEMIPQ8WUJ3 1361 aa14.78□□□□□ -0.04
SREBF1-209ENST00000470247 C1orf141Q5JVX7 400 aa14.78□□□□□ -0.04
SREBF1-209ENST00000470247 WDR63Q8IWG1 891 aa14.78□□□□□ -0.04
SREBF1-209ENST00000470247 RXRBP28702 533 aa14.77□□□□□ -0.05
SREBF1-209ENST00000470247 LMOD3Q0VAK6 560 aa14.77□□□□□ -0.05
SREBF1-209ENST00000470247 CDCA7LQ96GN5 454 aa14.77□□□□□ -0.05
SREBF1-209ENST00000470247 LRRC37A3O60309 1634 aa14.77□□□□□ -0.05
SREBF1-209ENST00000470247 DCAF5Q96JK2 942 aa14.76□□□□□ -0.05
SREBF1-209ENST00000470247 ADAMTS7Q9UKP4 1686 aa14.75□□□□□ -0.05
SREBF1-209ENST00000470247 HSP90AB1P08238 724 aaKnown RBP14.75□□□□□ -0.05
SREBF1-209ENST00000470247 ZNF853P0CG23 659 aa14.75□□□□□ -0.05
SREBF1-209ENST00000470247 TRMT2AQ8IZ69 625 aaKnown RBP14.75□□□□□ -0.05
SREBF1-209ENST00000470247 RTF1Q92541 710 aaKnown RBP14.75□□□□□ -0.05
SREBF1-209ENST00000470247 IL16Q14005 1332 aa14.74□□□□□ -0.05
SREBF1-209ENST00000470247 GOLGA2Q08379 1002 aa14.74□□□□□ -0.05
SREBF1-209ENST00000470247 SLFN5Q08AF3 891 aa14.74□□□□□ -0.05
SREBF1-209ENST00000470247 PDE3BQ13370 1112 aa14.73□□□□□ -0.05
SREBF1-209ENST00000470247 A0A0G2JS52 829 aa14.72□□□□□ -0.05
SREBF1-209ENST00000470247 ERVV-2B6SEH9 535 aa14.72□□□□□ -0.05
SREBF1-209ENST00000470247 CHL1O00533 1208 aa14.72□□□□□ -0.05
SREBF1-209ENST00000470247 MYT1Q01538 1121 aa14.72□□□□□ -0.05
SREBF1-209ENST00000470247 SLC52A2Q9HAB3 445 aa14.72□□□□□ -0.05
SREBF1-209ENST00000470247 TAF7Q15545 349 aaPredicted RBP14.71□□□□□ -0.05
SREBF1-209ENST00000470247 FAM182BQ5T319 152 aa14.71□□□□□ -0.05
SREBF1-209ENST00000470247 DUSP27Q5VZP5 1158 aa14.71□□□□□ -0.05
SREBF1-209ENST00000470247 NFATC2IPQ8NCF5 419 aa14.71□□□□□ -0.05
SREBF1-209ENST00000470247 CFAP44Q96MT7 982 aa14.71□□□□□ -0.05
SREBF1-209ENST00000470247 IFT57Q9NWB7 429 aa14.71□□□□□ -0.05
SREBF1-209ENST00000470247 BCL9O00512 1426 aa14.71□□□□□ -0.05
SREBF1-209ENST00000470247 RGS12O14924 1447 aa14.71□□□□□ -0.05
SREBF1-209ENST00000470247 SCN11AQ9UI33 1791 aa14.7□□□□□ -0.06
SREBF1-209ENST00000470247 E9PSI1 815 aa14.7□□□□□ -0.06
SREBF1-209ENST00000470247 CALD1Q05682 793 aaKnown RBP14.7□□□□□ -0.06
SREBF1-209ENST00000470247 KRT27Q7Z3Y8 459 aa14.7□□□□□ -0.06
SREBF1-209ENST00000470247 MIS18AQ9NYP9 233 aa14.7□□□□□ -0.06
SREBF1-209ENST00000470247 MRC1P22897 1456 aa14.69□□□□□ -0.06
SREBF1-209ENST00000470247 GNAI1P63096 354 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms