RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 EYA1Q99502 592 aa13.23□□□□□ -0.29
SRRT-208ENST00000469602 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
SRRT-208ENST00000469602 PARD3Q8TEW0 1356 aa13.22□□□□□ -0.29
SRRT-208ENST00000469602 SRCAPQ6ZRS2 3230 aa13.22□□□□□ -0.29
SRRT-208ENST00000469602 TATP17735 454 aaPredicted RBP13.22□□□□□ -0.29
SRRT-208ENST00000469602 ZCRB1Q8TBF4 217 aaKnown RBP13.22□□□□□ -0.29
SRRT-208ENST00000469602 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
SRRT-208ENST00000469602 RREB1Q92766 1687 aa13.21□□□□□ -0.29
SRRT-208ENST00000469602 PTF1AQ7RTS3 328 aa13.21□□□□□ -0.29
SRRT-208ENST00000469602 CAMKK2Q96RR4 588 aa13.21□□□□□ -0.29
SRRT-208ENST00000469602 DOT1LQ8TEK3 1739 aa13.21□□□□□ -0.3
SRRT-208ENST00000469602 BTAF1O14981 1849 aa13.2□□□□□ -0.3
SRRT-208ENST00000469602 IGSF1Q8N6C5 1336 aa13.2□□□□□ -0.3
SRRT-208ENST00000469602 MTHFSP49914 203 aa13.2□□□□□ -0.3
SRRT-208ENST00000469602 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
SRRT-208ENST00000469602 EZH2Q15910 746 aaKnown RBP13.2□□□□□ -0.3
SRRT-208ENST00000469602 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
SRRT-208ENST00000469602 PCDH11XQ9BZA7 1347 aa13.18□□□□□ -0.3
SRRT-208ENST00000469602 PCDH11YQ9BZA8 1340 aa13.18□□□□□ -0.3
SRRT-208ENST00000469602 PLSCR1O15162 318 aa13.18□□□□□ -0.3
SRRT-208ENST00000469602 KCNQ2O43526 872 aa13.18□□□□□ -0.3
SRRT-208ENST00000469602 ACSBG1Q96GR2 724 aa13.18□□□□□ -0.3
SRRT-208ENST00000469602 IL13P35225 146 aa13.17□□□□□ -0.3
SRRT-208ENST00000469602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.17□□□□□ -0.3
SRRT-208ENST00000469602 PLEKHG2Q9H7P9 1386 aa13.17□□□□□ -0.3
SRRT-208ENST00000469602 CYP27B1O15528 508 aa13.16□□□□□ -0.3
SRRT-208ENST00000469602 SPG7Q9UQ90 795 aa13.16□□□□□ -0.3
SRRT-208ENST00000469602 KDRP35968 1356 aa13.15□□□□□ -0.3
SRRT-208ENST00000469602 ITGB4P16144 1822 aa13.15□□□□□ -0.3
SRRT-208ENST00000469602 COL3A1P02461 1466 aaPredicted RBP13.15□□□□□ -0.3
SRRT-208ENST00000469602 TOGARAM1Q9Y4F4 1720 aa13.14□□□□□ -0.31
SRRT-208ENST00000469602 PRIM1P49642 420 aaKnown RBP13.14□□□□□ -0.31
SRRT-208ENST00000469602 SULT6B1Q6IMI4 303 aa13.14□□□□□ -0.31
SRRT-208ENST00000469602 AEBP1Q8IUX7 1158 aa13.14□□□□□ -0.31
SRRT-208ENST00000469602 DIAPH1O60610 1272 aaKnown RBP13.13□□□□□ -0.31
SRRT-208ENST00000469602 SYTL4Q96C24 671 aaPredicted RBP13.13□□□□□ -0.31
SRRT-208ENST00000469602 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
SRRT-208ENST00000469602 DDX10Q13206 875 aaKnown RBP13.12□□□□□ -0.31
SRRT-208ENST00000469602 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
SRRT-208ENST00000469602 PROM2Q8N271 834 aa13.12□□□□□ -0.31
SRRT-208ENST00000469602 LY75O60449 1722 aa13.11□□□□□ -0.31
SRRT-208ENST00000469602 PHKG2P15735 406 aa13.11□□□□□ -0.31
SRRT-208ENST00000469602 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
SRRT-208ENST00000469602 PLEKHO1Q53GL0 409 aaPredicted RBP13.11□□□□□ -0.31
SRRT-208ENST00000469602 IFNL2Q8IZJ0 200 aa13.11□□□□□ -0.31
SRRT-208ENST00000469602 CFAP53Q96M91 514 aa13.11□□□□□ -0.31
SRRT-208ENST00000469602 PSDA5PKW4 1024 aaPredicted RBP13.1□□□□□ -0.31
SRRT-208ENST00000469602 R3HDM1Q15032 1099 aaKnown RBP13.1□□□□□ -0.31
SRRT-208ENST00000469602 AMOTQ4VCS5 1084 aa13.1□□□□□ -0.31
SRRT-208ENST00000469602 NBPF14Q5TI25 921 aa13.1□□□□□ -0.31
SRRT-208ENST00000469602 HMOX1P09601 288 aa13.09□□□□□ -0.31
SRRT-208ENST00000469602 U2SURPO15042 1029 aaKnown RBP13.08□□□□□ -0.32
SRRT-208ENST00000469602 ZNF530Q6P9A1 599 aaPredicted RBP13.08□□□□□ -0.32
SRRT-208ENST00000469602 MPRIPQ6WCQ1 1025 aa13.08□□□□□ -0.32
SRRT-208ENST00000469602 PAPPAQ13219 1627 aa13.08□□□□□ -0.32
SRRT-208ENST00000469602 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.32
SRRT-208ENST00000469602 HSP90AB1P08238 724 aaKnown RBP13.07□□□□□ -0.32
SRRT-208ENST00000469602 SLC27A3Q5K4L6 730 aa13.07□□□□□ -0.32
SRRT-208ENST00000469602 SCN11AQ9UI33 1791 aa13.07□□□□□ -0.32
SRRT-208ENST00000469602 RALBP1Q15311 655 aa13.06□□□□□ -0.32
SRRT-208ENST00000469602 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
SRRT-208ENST00000469602 PIGBQ92521 554 aa13.06□□□□□ -0.32
SRRT-208ENST00000469602 DCAF5Q96JK2 942 aa13.06□□□□□ -0.32
SRRT-208ENST00000469602 ANO8Q9HCE9 1232 aaPredicted RBP13.06□□□□□ -0.32
SRRT-208ENST00000469602 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
SRRT-208ENST00000469602 LRRC4BQ9NT99 713 aa13.05□□□□□ -0.32
SRRT-208ENST00000469602 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
SRRT-208ENST00000469602 NUDCQ9Y266 331 aa13.05□□□□□ -0.32
SRRT-208ENST00000469602 TAF1LQ8IZX4 1826 aa13.04□□□□□ -0.32
SRRT-208ENST00000469602 LRP5O75197 1615 aa13.04□□□□□ -0.32
SRRT-208ENST00000469602 ERVV-2B6SEH9 535 aa13.04□□□□□ -0.32
SRRT-208ENST00000469602 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
SRRT-208ENST00000469602 STK32BQ9NY57 414 aa13.04□□□□□ -0.32
SRRT-208ENST00000469602 C5P01031 1676 aa13.04□□□□□ -0.32
SRRT-208ENST00000469602 PALLDQ8WX93 1383 aa13.04□□□□□ -0.32
SRRT-208ENST00000469602 CASZ1Q86V15 1759 aa13.04□□□□□ -0.32
SRRT-208ENST00000469602 SLC15A2Q16348 729 aa13.03□□□□□ -0.32
SRRT-208ENST00000469602 SMARCC1Q92922 1105 aaPredicted RBP13.03□□□□□ -0.32
SRRT-208ENST00000469602 CCNL1Q9UK58 526 aaPredicted RBP13.03□□□□□ -0.32
SRRT-208ENST00000469602 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.32
SRRT-208ENST00000469602 QSER1Q2KHR3 1735 aa13.02□□□□□ -0.32
SRRT-208ENST00000469602 TUBGCP6Q96RT7 1819 aa13.02□□□□□ -0.32
SRRT-208ENST00000469602 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.33
SRRT-208ENST00000469602 KCNQ4P56696 695 aa13.02□□□□□ -0.33
SRRT-208ENST00000469602 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.33
SRRT-208ENST00000469602 MTHFSDQ2M296 383 aaKnown RBP13.02□□□□□ -0.33
SRRT-208ENST00000469602 RSPH6AQ9H0K4 717 aa13.02□□□□□ -0.33
SRRT-208ENST00000469602 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
SRRT-208ENST00000469602 MRC1P22897 1456 aa13□□□□□ -0.33
SRRT-208ENST00000469602 MYBBP1AQ9BQG0 1328 aaKnown RBP13□□□□□ -0.33
SRRT-208ENST00000469602 FCHSD2O94868 740 aa13□□□□□ -0.33
SRRT-208ENST00000469602 PRKAR2BP31323 418 aa13□□□□□ -0.33
SRRT-208ENST00000469602 CABP4P57796 275 aa13□□□□□ -0.33
SRRT-208ENST00000469602 ZNF827Q17R98 1081 aa13□□□□□ -0.33
SRRT-208ENST00000469602 AKT1S1Q96B36 256 aa13□□□□□ -0.33
SRRT-208ENST00000469602 ASAP1Q9ULH1 1129 aa13□□□□□ -0.33
SRRT-208ENST00000469602 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
SRRT-208ENST00000469602 GAS2L2Q8NHY3 880 aa12.99□□□□□ -0.33
SRRT-208ENST00000469602 PHACTR3Q96KR7 559 aa12.99□□□□□ -0.33
SRRT-208ENST00000469602 ATG3Q9NT62 314 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms