RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 DNMBPQ6XZF7 1577 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 TOM1O60784 492 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 SMARCE1Q969G3 411 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 ACSBG1Q96GR2 724 aa8.35□□□□□ -1.07
CD46-212ENST00000469535 SSR1P43307 286 aaKnown RBP8.34□□□□□ -1.07
CD46-212ENST00000469535 MYO6Q9UM54 1294 aa8.34□□□□□ -1.07
CD46-212ENST00000469535 IFIT1P09914 478 aaKnown RBP8.34□□□□□ -1.07
CD46-212ENST00000469535 DESP17661 470 aa8.34□□□□□ -1.07
CD46-212ENST00000469535 DEF6Q9H4E7 631 aa8.34□□□□□ -1.07
CD46-212ENST00000469535 STIM1Q13586 685 aa8.34□□□□□ -1.07
CD46-212ENST00000469535 KRT28Q7Z3Y7 464 aa8.34□□□□□ -1.07
CD46-212ENST00000469535 BMP2KQ9NSY1 1161 aaPredicted RBP8.34□□□□□ -1.07
CD46-212ENST00000469535 IL1RAPL2Q9NP60 686 aa8.34□□□□□ -1.07
CD46-212ENST00000469535 AMOTL2Q9Y2J4 779 aa8.34□□□□□ -1.07
CD46-212ENST00000469535 PHF8Q9UPP1 1060 aa8.34□□□□□ -1.07
CD46-212ENST00000469535 CYP46A1Q9Y6A2 500 aa8.34□□□□□ -1.07
CD46-212ENST00000469535 DRC1Q96MC2 740 aa8.33□□□□□ -1.08
CD46-212ENST00000469535 PLEKHH2Q8IVE3 1493 aa8.33□□□□□ -1.08
CD46-212ENST00000469535 CCDC7Q96M83 1385 aa8.33□□□□□ -1.08
CD46-212ENST00000469535 ST5P78524 1137 aa8.33□□□□□ -1.08
CD46-212ENST00000469535 ZNF287Q9HBT7 754 aa8.33□□□□□ -1.08
CD46-212ENST00000469535 CWC27Q6UX04 472 aaKnown RBP8.33□□□□□ -1.08
CD46-212ENST00000469535 CD109Q6YHK3 1445 aa8.33□□□□□ -1.08
CD46-212ENST00000469535 CHRNA2Q15822 529 aa8.33□□□□□ -1.08
CD46-212ENST00000469535 MCM10Q7L590 875 aa8.33□□□□□ -1.08
CD46-212ENST00000469535 FIBPO43427 364 aa8.32□□□□□ -1.08
CD46-212ENST00000469535 CUL5Q93034 780 aa8.32□□□□□ -1.08
CD46-212ENST00000469535 LRPPRCP42704 1394 aaKnown RBP8.32□□□□□ -1.08
CD46-212ENST00000469535 ZNF444Q8N0Y2 327 aaPredicted RBP8.32□□□□□ -1.08
CD46-212ENST00000469535 ZNHIT6Q9NWK9 470 aaKnown RBP8.32□□□□□ -1.08
CD46-212ENST00000469535 MYO1BO43795 1136 aa8.32□□□□□ -1.08
CD46-212ENST00000469535 ME1P48163 572 aa8.32□□□□□ -1.08
CD46-212ENST00000469535 JMYQ8N9B5 988 aa8.32□□□□□ -1.08
CD46-212ENST00000469535 RNF214Q8ND24 703 aa8.32□□□□□ -1.08
CD46-212ENST00000469535 DHX8Q14562 1220 aaKnown RBP8.31□□□□□ -1.08
CD46-212ENST00000469535 NOM1Q5C9Z4 860 aaKnown RBP8.31□□□□□ -1.08
CD46-212ENST00000469535 TTC16Q8NEE8 873 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 SLC5A1P13866 664 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 IFIT5Q13325 482 aaKnown RBP8.31□□□□□ -1.08
CD46-212ENST00000469535 DDX46Q7L014 1031 aaKnown RBP8.31□□□□□ -1.08
CD46-212ENST00000469535 NUTM1Q86Y26 1132 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 UBA5Q9GZZ9 404 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 ZBTB3Q9H5J0 574 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 FAM13BQ9NYF5 915 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 PIP4K2AP48426 406 aaPredicted RBP8.31□□□□□ -1.08
CD46-212ENST00000469535 CDCA7LQ96GN5 454 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 EPRSP07814 1512 aaKnown RBP8.31□□□□□ -1.08
CD46-212ENST00000469535 POLD1P28340 1107 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 FBXO31Q5XUX0 539 aaPredicted RBP8.31□□□□□ -1.08
CD46-212ENST00000469535 TRIM5Q9C035 493 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 CTNNA3Q9UI47 895 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 AKAP2Q9Y2D5 859 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 CCDC61Q9Y6R9 512 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 RANBP6O60518 1105 aaKnown RBP8.31□□□□□ -1.08
CD46-212ENST00000469535 SERPINC1P01008 464 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 SEPT7Q16181 437 aaKnown RBP8.31□□□□□ -1.08
CD46-212ENST00000469535 IMMTQ16891 758 aaKnown RBP8.31□□□□□ -1.08
CD46-212ENST00000469535 CCDC181Q5TID7 509 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 DNAI2Q9GZS0 605 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 CDKL5O76039 1030 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 DCTN1Q14203 1278 aa8.31□□□□□ -1.08
CD46-212ENST00000469535 PDCP20941 246 aa8.3□□□□□ -1.08
CD46-212ENST00000469535 SLF2Q8IX21 1173 aa8.3□□□□□ -1.08
CD46-212ENST00000469535 POLA1P09884 1462 aaPredicted RBP8.3□□□□□ -1.08
CD46-212ENST00000469535 ATAD2Q6PL18 1390 aa8.3□□□□□ -1.08
CD46-212ENST00000469535 LRRC9Q6ZRR7 1453 aa8.3□□□□□ -1.08
CD46-212ENST00000469535 ANKRD18BA2A2Z9 1011 aa8.3□□□□□ -1.08
CD46-212ENST00000469535 ACBD3Q9H3P7 528 aa8.3□□□□□ -1.08
CD46-212ENST00000469535 ANKRD1Q15327 319 aa8.3□□□□□ -1.08
CD46-212ENST00000469535 HSP90AB3PQ58FF7 597 aa8.3□□□□□ -1.08
CD46-212ENST00000469535 RBM26Q5T8P6 1007 aaKnown RBP8.3□□□□□ -1.08
CD46-212ENST00000469535 PDZRN3Q9UPQ7 1066 aa8.3□□□□□ -1.08
CD46-212ENST00000469535 F8W031 263 aaPredicted RBP8.3□□□□□ -1.08
CD46-212ENST00000469535 NBPF8Q3BBV2 869 aa8.3□□□□□ -1.08
CD46-212ENST00000469535 NBPF14Q5TI25 921 aa8.3□□□□□ -1.08
CD46-212ENST00000469535 ZNF771Q7L3S4 317 aaPredicted RBP8.3□□□□□ -1.08
CD46-212ENST00000469535 GCC1Q96CN9 775 aa8.3□□□□□ -1.08
CD46-212ENST00000469535 MSH6P52701 1360 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 CASKIN1Q8WXD9 1431 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 KIF21BO75037 1637 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 RPGRIP1LQ68CZ1 1315 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 NBPF6Q5VWK0 638 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 NBPF5PQ86XG9 351 aaPredicted RBP8.29□□□□□ -1.08
CD46-212ENST00000469535 NBPF4Q96M43 638 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 JAKMIP1Q96N16 626 aaKnown RBP8.29□□□□□ -1.08
CD46-212ENST00000469535 NAPBQ9H115 298 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 TEX35Q5T0J7 233 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 BLOC1S2Q6QNY1 142 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 THUMPD2Q9BTF0 503 aaKnown RBP8.29□□□□□ -1.08
CD46-212ENST00000469535 LARP1Q6PKG0 1096 aaKnown RBP8.29□□□□□ -1.08
CD46-212ENST00000469535 NME9Q86XW9 330 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 CEP57L1Q8IYX8 460 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 CABP5Q9NP86 173 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 BIN2Q9UBW5 565 aaPredicted RBP8.29□□□□□ -1.08
CD46-212ENST00000469535 DUSP27Q5VZP5 1158 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 CCDC82Q8N4S0 544 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 ABCA10Q8WWZ4 1543 aa8.29□□□□□ -1.08
CD46-212ENST00000469535 HSP90B2PQ58FF3 399 aa8.28□□□□□ -1.08
CD46-212ENST00000469535 PPFIBP1Q86W92 1011 aa8.28□□□□□ -1.08
CD46-212ENST00000469535 MAP3K12Q12852 859 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms