RNA–Protein interactions for RNA: ENST00000469522.1

SNU13-207, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 2

Gene SNU13, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-207ENST00000469522 POLR3GLQ9BT43 218 aa16.24■□□□□ 0.19
SNU13-207ENST00000469522 PANK3Q9H999 370 aa16.22■□□□□ 0.19
SNU13-207ENST00000469522 NSD2O96028 1365 aa16.22■□□□□ 0.19
SNU13-207ENST00000469522 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
SNU13-207ENST00000469522 CGNL1Q0VF96 1302 aa16.21■□□□□ 0.19
SNU13-207ENST00000469522 TOGARAM1Q9Y4F4 1720 aa16.2■□□□□ 0.18
SNU13-207ENST00000469522 TXNRD1Q16881 649 aa16.2■□□□□ 0.18
SNU13-207ENST00000469522 DDX54Q8TDD1 881 aaKnown RBP16.2■□□□□ 0.18
SNU13-207ENST00000469522 POLKQ9UBT6 870 aa16.2■□□□□ 0.18
SNU13-207ENST00000469522 PDGFDQ9GZP0 370 aaPredicted RBP16.19■□□□□ 0.18
SNU13-207ENST00000469522 LY75O60449 1722 aa16.19■□□□□ 0.18
SNU13-207ENST00000469522 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
SNU13-207ENST00000469522 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
SNU13-207ENST00000469522 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
SNU13-207ENST00000469522 ZCRB1Q8TBF4 217 aaKnown RBP16.17■□□□□ 0.18
SNU13-207ENST00000469522 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
SNU13-207ENST00000469522 LRRC4BQ9NT99 713 aa16.16■□□□□ 0.18
SNU13-207ENST00000469522 TUBGCP6Q96RT7 1819 aa16.16■□□□□ 0.18
SNU13-207ENST00000469522 TNNT2P45379 298 aaPredicted RBP16.15■□□□□ 0.18
SNU13-207ENST00000469522 ITGB4P16144 1822 aa16.15■□□□□ 0.18
SNU13-207ENST00000469522 PPM1GO15355 546 aaPredicted RBP16.14■□□□□ 0.17
SNU13-207ENST00000469522 EYA1Q99502 592 aa16.14■□□□□ 0.17
SNU13-207ENST00000469522 CYP27B1O15528 508 aa16.13■□□□□ 0.17
SNU13-207ENST00000469522 PRIM1P49642 420 aaKnown RBP16.13■□□□□ 0.17
SNU13-207ENST00000469522 EIF4A2Q14240 407 aaKnown RBP16.13■□□□□ 0.17
SNU13-207ENST00000469522 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
SNU13-207ENST00000469522 TATP17735 454 aaPredicted RBP16.12■□□□□ 0.17
SNU13-207ENST00000469522 ZNF827Q17R98 1081 aa16.12■□□□□ 0.17
SNU13-207ENST00000469522 RAPGEF4Q8WZA2 1011 aa16.12■□□□□ 0.17
SNU13-207ENST00000469522 QSER1Q2KHR3 1735 aa16.11■□□□□ 0.17
SNU13-207ENST00000469522 SLC15A2Q16348 729 aa16.11■□□□□ 0.17
SNU13-207ENST00000469522 UTRNP46939 3433 aa16.1■□□□□ 0.17
SNU13-207ENST00000469522 PER1O15534 1290 aaPredicted RBP16.1■□□□□ 0.17
SNU13-207ENST00000469522 KCNQ4P56696 695 aa16.1■□□□□ 0.17
SNU13-207ENST00000469522 PCDH11XQ9BZA7 1347 aa16.09■□□□□ 0.17
SNU13-207ENST00000469522 PCDH11YQ9BZA8 1340 aa16.09■□□□□ 0.17
SNU13-207ENST00000469522 TAF1LQ8IZX4 1826 aa16.08■□□□□ 0.17
SNU13-207ENST00000469522 AKT1S1Q96B36 256 aa16.08■□□□□ 0.16
SNU13-207ENST00000469522 SYTL4Q96C24 671 aaPredicted RBP16.08■□□□□ 0.16
SNU13-207ENST00000469522 IGSF1Q8N6C5 1336 aa16.08■□□□□ 0.16
SNU13-207ENST00000469522 PTGER2P43116 358 aa16.07■□□□□ 0.16
SNU13-207ENST00000469522 STK32BQ9NY57 414 aa16.07■□□□□ 0.16
SNU13-207ENST00000469522 COL24A1Q17RW2 1714 aa16.07■□□□□ 0.16
SNU13-207ENST00000469522 ZBTB7AO95365 584 aa16.06■□□□□ 0.16
SNU13-207ENST00000469522 NKX1-1Q15270 411 aaPredicted RBP16.06■□□□□ 0.16
SNU13-207ENST00000469522 MORC1Q86VD1 984 aa16.06■□□□□ 0.16
SNU13-207ENST00000469522 SPON1Q9HCB6 807 aa16.06■□□□□ 0.16
SNU13-207ENST00000469522 KNSTRNQ9Y448 316 aa16.06■□□□□ 0.16
SNU13-207ENST00000469522 C5P01031 1676 aa16.05■□□□□ 0.16
SNU13-207ENST00000469522 SGIP1Q9BQI5 828 aa16.05■□□□□ 0.16
SNU13-207ENST00000469522 SLC27A3Q5K4L6 730 aa16.04■□□□□ 0.16
SNU13-207ENST00000469522 AEBP1Q8IUX7 1158 aa16.04■□□□□ 0.16
SNU13-207ENST00000469522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNU13-207ENST00000469522 GOLGB1Q14789 3259 aaKnown RBP16.02■□□□□ 0.16
SNU13-207ENST00000469522 PNPLA7Q6ZV29 1317 aa16.02■□□□□ 0.16
SNU13-207ENST00000469522 PHKG2P15735 406 aa16.02■□□□□ 0.16
SNU13-207ENST00000469522 ATF5Q9Y2D1 282 aaPredicted RBP16.02■□□□□ 0.16
SNU13-207ENST00000469522 PLEKHG2Q9H7P9 1386 aa16.01■□□□□ 0.15
SNU13-207ENST00000469522 IL13P35225 146 aa16.01■□□□□ 0.15
SNU13-207ENST00000469522 MPRIPQ6WCQ1 1025 aa16.01■□□□□ 0.15
SNU13-207ENST00000469522 PIGBQ92521 554 aa16.01■□□□□ 0.15
SNU13-207ENST00000469522 KDRP35968 1356 aa16■□□□□ 0.15
SNU13-207ENST00000469522 PALLDQ8WX93 1383 aa16■□□□□ 0.15
SNU13-207ENST00000469522 COL3A1P02461 1466 aaPredicted RBP16■□□□□ 0.15
SNU13-207ENST00000469522 CCNL1Q9UK58 526 aaPredicted RBP16■□□□□ 0.15
SNU13-207ENST00000469522 SPG7Q9UQ90 795 aa16■□□□□ 0.15
SNU13-207ENST00000469522 KDM6AO15550 1401 aaPredicted RBP16■□□□□ 0.15
SNU13-207ENST00000469522 CC2D1BQ5T0F9 858 aaKnown RBP15.99■□□□□ 0.15
SNU13-207ENST00000469522 MTFR1LQ9H019 292 aa15.99■□□□□ 0.15
SNU13-207ENST00000469522 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
SNU13-207ENST00000469522 UBR3Q6ZT12 1888 aa15.99■□□□□ 0.15
SNU13-207ENST00000469522 NPC1L1Q9UHC9 1359 aa15.99■□□□□ 0.15
SNU13-207ENST00000469522 AMIGO3Q86WK7 504 aa15.98■□□□□ 0.15
SNU13-207ENST00000469522 IFNL2Q8IZJ0 200 aa15.98■□□□□ 0.15
SNU13-207ENST00000469522 VIRMAQ69YN4 1812 aaKnown RBP15.97■□□□□ 0.15
SNU13-207ENST00000469522 MTHFSP49914 203 aa15.97■□□□□ 0.15
SNU13-207ENST00000469522 SCN11AQ9UI33 1791 aa15.96■□□□□ 0.15
SNU13-207ENST00000469522 SULT6B1Q6IMI4 303 aa15.95■□□□□ 0.14
SNU13-207ENST00000469522 PPP1R1BQ9UD71 204 aaPredicted RBP15.95■□□□□ 0.14
SNU13-207ENST00000469522 ASAP1Q9ULH1 1129 aa15.95■□□□□ 0.14
SNU13-207ENST00000469522 COL23A1Q86Y22 540 aaPredicted RBP15.94■□□□□ 0.14
SNU13-207ENST00000469522 ATG3Q9NT62 314 aa15.94■□□□□ 0.14
SNU13-207ENST00000469522 TFCP2L1Q9NZI6 479 aa15.94■□□□□ 0.14
SNU13-207ENST00000469522 COL5A3P25940 1745 aaPredicted RBP15.94■□□□□ 0.14
SNU13-207ENST00000469522 ZNF831Q5JPB2 1677 aa15.93■□□□□ 0.14
SNU13-207ENST00000469522 ADAMTS7Q9UKP4 1686 aa15.93■□□□□ 0.14
SNU13-207ENST00000469522 ITPK1Q13572 414 aa15.93■□□□□ 0.14
SNU13-207ENST00000469522 SMIM5Q71RC9 77 aa15.93■□□□□ 0.14
SNU13-207ENST00000469522 SLC4A9Q96Q91 983 aa15.93■□□□□ 0.14
SNU13-207ENST00000469522 PLEKHO1Q53GL0 409 aaPredicted RBP15.92■□□□□ 0.14
SNU13-207ENST00000469522 ZNF530Q6P9A1 599 aaPredicted RBP15.92■□□□□ 0.14
SNU13-207ENST00000469522 LINC00116Q8NCU8 138 aa15.92■□□□□ 0.14
SNU13-207ENST00000469522 FHDC1Q9C0D6 1143 aaPredicted RBP15.92■□□□□ 0.14
SNU13-207ENST00000469522 TMOD3Q9NYL9 352 aa15.92■□□□□ 0.14
SNU13-207ENST00000469522 LOC102724428A0A0B4J2F2 783 aa15.91■□□□□ 0.14
SNU13-207ENST00000469522 SIK1P57059 783 aa15.91■□□□□ 0.14
SNU13-207ENST00000469522 CNGB1Q14028 1251 aaPredicted RBP15.91■□□□□ 0.14
SNU13-207ENST00000469522 SLC16A10Q8TF71 515 aa15.91■□□□□ 0.14
SNU13-207ENST00000469522 SMARCC1Q92922 1105 aaPredicted RBP15.91■□□□□ 0.14
SNU13-207ENST00000469522 MYH14Q7Z406 1995 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms