RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 PTCD1O75127 700 aaKnown RBP18.05■□□□□ 0.48
LIMS2-213ENST00000469300 CHD1LQ86WJ1 897 aa18.05■□□□□ 0.48
LIMS2-213ENST00000469300 RAB11FIP3O75154 756 aa18.04■□□□□ 0.48
LIMS2-213ENST00000469300 ANKRD1Q15327 319 aa18.04■□□□□ 0.48
LIMS2-213ENST00000469300 SIL1Q9H173 461 aa18.04■□□□□ 0.48
LIMS2-213ENST00000469300 C19orf44Q9H6X5 657 aa18.04■□□□□ 0.48
LIMS2-213ENST00000469300 FOXD4L6Q3SYB3 417 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-213ENST00000469300 FOXD4L3Q6VB84 417 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-213ENST00000469300 THUMPD2Q9BTF0 503 aaKnown RBP18.04■□□□□ 0.48
LIMS2-213ENST00000469300 CWC22Q9HCG8 908 aaKnown RBP18.04■□□□□ 0.48
LIMS2-213ENST00000469300 ATP10AO60312 1499 aa18.03■□□□□ 0.48
LIMS2-213ENST00000469300 PES1O00541 588 aaKnown RBP18.03■□□□□ 0.48
LIMS2-213ENST00000469300 PODXL2Q9NZ53 605 aa18.03■□□□□ 0.48
LIMS2-213ENST00000469300 CTNNA3Q9UI47 895 aa18.03■□□□□ 0.48
LIMS2-213ENST00000469300 AKAP2Q9Y2D5 859 aa18.03■□□□□ 0.48
LIMS2-213ENST00000469300 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
LIMS2-213ENST00000469300 RARSP54136 660 aaKnown RBP18.03■□□□□ 0.48
LIMS2-213ENST00000469300 AACSQ86V21 672 aa18.03■□□□□ 0.48
LIMS2-213ENST00000469300 KIF1BPQ96EK5 621 aa18.03■□□□□ 0.48
LIMS2-213ENST00000469300 EIF2AK4Q9P2K8 1649 aaKnown RBP18.03■□□□□ 0.48
LIMS2-213ENST00000469300 NKTRP30414 1462 aaKnown RBP18.02■□□□□ 0.48
LIMS2-213ENST00000469300 NEK4P51957 841 aa18.02■□□□□ 0.48
LIMS2-213ENST00000469300 CCDC43Q96MW1 224 aaKnown RBP18.02■□□□□ 0.48
LIMS2-213ENST00000469300 ZPR1O75312 459 aa18.02■□□□□ 0.48
LIMS2-213ENST00000469300 TMEM57Q8N5G2 664 aa18.02■□□□□ 0.48
LIMS2-213ENST00000469300 PTPRCP08575 1304 aa18.02■□□□□ 0.48
LIMS2-213ENST00000469300 CEP170Q5SW79 1584 aa18.02■□□□□ 0.48
LIMS2-213ENST00000469300 USHBP1Q8N6Y0 703 aa18.02■□□□□ 0.48
LIMS2-213ENST00000469300 ANKRD24Q8TF21 1146 aa18.02■□□□□ 0.48
LIMS2-213ENST00000469300 SSH1Q8WYL5 1049 aa18.02■□□□□ 0.48
LIMS2-213ENST00000469300 MPRIPQ6WCQ1 1025 aa18.01■□□□□ 0.47
LIMS2-213ENST00000469300 DCTN1Q14203 1278 aa18.01■□□□□ 0.47
LIMS2-213ENST00000469300 CYP46A1Q9Y6A2 500 aa18■□□□□ 0.47
LIMS2-213ENST00000469300 NEO1Q92859 1461 aa18■□□□□ 0.47
LIMS2-213ENST00000469300 DNAAF4Q8WXU2 420 aa18■□□□□ 0.47
LIMS2-213ENST00000469300 MIS18AQ9NYP9 233 aa18■□□□□ 0.47
LIMS2-213ENST00000469300 ARHGEF12Q9NZN5 1544 aa18■□□□□ 0.47
LIMS2-213ENST00000469300 PPIP5K1Q6PFW1 1433 aa17.99■□□□□ 0.47
LIMS2-213ENST00000469300 KRT32Q14532 448 aa17.99■□□□□ 0.47
LIMS2-213ENST00000469300 A0A0U1RQG5 324 aaPredicted RBP17.98■□□□□ 0.47
LIMS2-213ENST00000469300 IKQ13123 557 aaPredicted RBP17.98■□□□□ 0.47
LIMS2-213ENST00000469300 ADGRL2O95490 1459 aa17.98■□□□□ 0.47
LIMS2-213ENST00000469300 GLRX3O76003 335 aaKnown RBP17.98■□□□□ 0.47
LIMS2-213ENST00000469300 IFIT1P09914 478 aaKnown RBP17.97■□□□□ 0.47
LIMS2-213ENST00000469300 ASXL1Q8IXJ9 1541 aa17.97■□□□□ 0.47
LIMS2-213ENST00000469300 IPO7O95373 1038 aaKnown RBP17.97■□□□□ 0.47
LIMS2-213ENST00000469300 PDIA4P13667 645 aaKnown RBP17.97■□□□□ 0.47
LIMS2-213ENST00000469300 SASS6Q6UVJ0 657 aa17.97■□□□□ 0.47
LIMS2-213ENST00000469300 TRPM2O94759 1503 aa17.96■□□□□ 0.47
LIMS2-213ENST00000469300 FKBP4Q02790 459 aaKnown RBP eCLIP17.96■□□□□ 0.47
LIMS2-213ENST00000469300 METTL24Q5JXM2 366 aa17.96■□□□□ 0.47
LIMS2-213ENST00000469300 ATP7AQ04656 1500 aa17.96■□□□□ 0.47
LIMS2-213ENST00000469300 NOC3LQ8WTT2 800 aaKnown RBP17.96■□□□□ 0.46
LIMS2-213ENST00000469300 DNMT1P26358 1616 aaKnown RBP17.96■□□□□ 0.46
LIMS2-213ENST00000469300 TRIM22Q8IYM9 498 aa17.95■□□□□ 0.46
LIMS2-213ENST00000469300 RRP12Q5JTH9 1297 aaKnown RBP17.95■□□□□ 0.46
LIMS2-213ENST00000469300 MYD88Q99836 296 aa17.95■□□□□ 0.46
LIMS2-213ENST00000469300 PPP1R1BQ9UD71 204 aaPredicted RBP17.95■□□□□ 0.46
LIMS2-213ENST00000469300 SNRPA1P09661 255 aaKnown RBP17.94■□□□□ 0.46
LIMS2-213ENST00000469300 FLIIQ13045 1269 aa17.94■□□□□ 0.46
LIMS2-213ENST00000469300 IFIT5Q13325 482 aaKnown RBP17.94■□□□□ 0.46
LIMS2-213ENST00000469300 BICDL1Q6ZP65 573 aa17.94■□□□□ 0.46
LIMS2-213ENST00000469300 UBAP1LF5GYI3 381 aa17.94■□□□□ 0.46
LIMS2-213ENST00000469300 A0A087WZG4 1122 aa17.93■□□□□ 0.46
LIMS2-213ENST00000469300 MBD3O95983 291 aa17.93■□□□□ 0.46
LIMS2-213ENST00000469300 AEBP1Q8IUX7 1158 aa17.93■□□□□ 0.46
LIMS2-213ENST00000469300 LRP2BPQ9P2M1 347 aa17.93■□□□□ 0.46
LIMS2-213ENST00000469300 ZNF396Q96N95 335 aaPredicted RBP17.93■□□□□ 0.46
LIMS2-213ENST00000469300 IL1RAPL2Q9NP60 686 aa17.93■□□□□ 0.46
LIMS2-213ENST00000469300 NFKBIBQ15653 356 aa17.93■□□□□ 0.46
LIMS2-213ENST00000469300 MAP7D2Q96T17 732 aa17.93■□□□□ 0.46
LIMS2-213ENST00000469300 CAVIN4Q5BKX8 364 aa17.93■□□□□ 0.46
LIMS2-213ENST00000469300 BLOC1S2Q6QNY1 142 aa17.93■□□□□ 0.46
LIMS2-213ENST00000469300 JMYQ8N9B5 988 aa17.93■□□□□ 0.46
LIMS2-213ENST00000469300 PIK3R4Q99570 1358 aa17.93■□□□□ 0.46
LIMS2-213ENST00000469300 MAPKBP1O60336 1514 aa17.92■□□□□ 0.46
LIMS2-213ENST00000469300 FLT4P35916 1363 aa17.92■□□□□ 0.46
LIMS2-213ENST00000469300 RAI14Q9P0K7 980 aa17.92■□□□□ 0.46
LIMS2-213ENST00000469300 ZSCAN31Q96LW9 406 aaPredicted RBP17.92■□□□□ 0.46
LIMS2-213ENST00000469300 NPATQ14207 1427 aa17.92■□□□□ 0.46
LIMS2-213ENST00000469300 C20orf194Q5TEA3 1177 aa17.92■□□□□ 0.46
LIMS2-213ENST00000469300 ZCRB1Q8TBF4 217 aaKnown RBP17.92■□□□□ 0.46
LIMS2-213ENST00000469300 TRMT112Q9UI30 125 aaKnown RBP17.92■□□□□ 0.46
LIMS2-213ENST00000469300 SAMD9Q5K651 1589 aa17.92■□□□□ 0.46
LIMS2-213ENST00000469300 SAMD1Q6SPF0 538 aaPredicted RBP17.92■□□□□ 0.46
LIMS2-213ENST00000469300 HSP90AB2PQ58FF8 381 aa17.91■□□□□ 0.46
LIMS2-213ENST00000469300 FAM13BQ9NYF5 915 aa17.91■□□□□ 0.46
LIMS2-213ENST00000469300 CDKL5O76039 1030 aa17.91■□□□□ 0.46
LIMS2-213ENST00000469300 ZNF771Q7L3S4 317 aaPredicted RBP17.91■□□□□ 0.46
LIMS2-213ENST00000469300 NAT10Q9H0A0 1025 aaKnown RBP17.91■□□□□ 0.46
LIMS2-213ENST00000469300 ZNF287Q9HBT7 754 aa17.91■□□□□ 0.46
LIMS2-213ENST00000469300 TMOD2Q9NZR1 351 aa17.91■□□□□ 0.46
LIMS2-213ENST00000469300 EXOC6BQ9Y2D4 811 aa17.91■□□□□ 0.46
LIMS2-213ENST00000469300 YTHDC2Q9H6S0 1430 aaKnown RBP17.91■□□□□ 0.46
LIMS2-213ENST00000469300 POLR3AO14802 1390 aaPredicted RBP17.91■□□□□ 0.46
LIMS2-213ENST00000469300 CHRNA2Q15822 529 aa17.91■□□□□ 0.46
LIMS2-213ENST00000469300 SDF4Q9BRK5 362 aa17.91■□□□□ 0.46
LIMS2-213ENST00000469300 TXLNAP40222 546 aa17.91■□□□□ 0.46
LIMS2-213ENST00000469300 ARHGAP45Q92619 1136 aa17.91■□□□□ 0.46
LIMS2-213ENST00000469300 MX1P20591 662 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms