RNA–Protein interactions for RNA: ENST00000469211.1

TRO-219, Transcript of trophinin, humanhuman

TSL 2

Gene TRO, Length 842 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-219ENST00000469211 HMOX1P09601 288 aa12.87□□□□□ -0.35
TRO-219ENST00000469211 SULT6B1Q6IMI4 303 aa12.87□□□□□ -0.35
TRO-219ENST00000469211 USHBP1Q8N6Y0 703 aa12.87□□□□□ -0.35
TRO-219ENST00000469211 EP400Q96L91 3159 aa12.87□□□□□ -0.35
TRO-219ENST00000469211 DISP2A7MBM2 1401 aa12.87□□□□□ -0.35
TRO-219ENST00000469211 PRKAR2BP31323 418 aa12.86□□□□□ -0.35
TRO-219ENST00000469211 LARP1Q6PKG0 1096 aaKnown RBP12.86□□□□□ -0.35
TRO-219ENST00000469211 CCDC146Q8IYE0 955 aa12.86□□□□□ -0.35
TRO-219ENST00000469211 TRPC5Q9UL62 973 aaPredicted RBP12.86□□□□□ -0.35
TRO-219ENST00000469211 WNK3Q9BYP7 1800 aa12.85□□□□□ -0.35
TRO-219ENST00000469211 RUNDC1Q96C34 613 aa12.85□□□□□ -0.35
TRO-219ENST00000469211 CARD10Q9BWT7 1032 aa12.85□□□□□ -0.35
TRO-219ENST00000469211 PKD1L3Q7Z443 1732 aa12.85□□□□□ -0.35
TRO-219ENST00000469211 CSB-PGBD3P0DP91 1061 aa12.84□□□□□ -0.35
TRO-219ENST00000469211 UPF1Q92900 1129 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRO-219ENST00000469211 STRN4Q9NRL3 753 aa12.84□□□□□ -0.35
TRO-219ENST00000469211 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
TRO-219ENST00000469211 PARP4Q9UKK3 1724 aaKnown RBP12.83□□□□□ -0.36
TRO-219ENST00000469211 UNC5CLQ8IV45 518 aa12.83□□□□□ -0.36
TRO-219ENST00000469211 PHACTR3Q96KR7 559 aa12.83□□□□□ -0.36
TRO-219ENST00000469211 NLRP2Q9NX02 1062 aa12.83□□□□□ -0.36
TRO-219ENST00000469211 VASPP50552 380 aaPredicted RBP12.82□□□□□ -0.36
TRO-219ENST00000469211 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
TRO-219ENST00000469211 GJD4Q96KN9 370 aaPredicted RBP12.82□□□□□ -0.36
TRO-219ENST00000469211 SPATA31A1Q5TZJ5 1347 aa12.82□□□□□ -0.36
TRO-219ENST00000469211 SPATA31A5Q5VU36 1347 aa12.82□□□□□ -0.36
TRO-219ENST00000469211 SPATA31A7Q8IWB4 1347 aa12.82□□□□□ -0.36
TRO-219ENST00000469211 APAF1O14727 1248 aa12.81□□□□□ -0.36
TRO-219ENST00000469211 EVA1CP58658 441 aa12.81□□□□□ -0.36
TRO-219ENST00000469211 HNRNPUQ00839 825 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRO-219ENST00000469211 VPS72Q15906 364 aa12.81□□□□□ -0.36
TRO-219ENST00000469211 TCP11L2Q8N4U5 519 aa12.81□□□□□ -0.36
TRO-219ENST00000469211 PNNQ9H307 717 aaKnown RBP12.81□□□□□ -0.36
TRO-219ENST00000469211 SHANK3Q9BYB0 1731 aa12.81□□□□□ -0.36
TRO-219ENST00000469211 ZBED9Q6R2W3 1325 aa12.81□□□□□ -0.36
TRO-219ENST00000469211 ZNF521Q96K83 1311 aa12.81□□□□□ -0.36
TRO-219ENST00000469211 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
TRO-219ENST00000469211 LRRC37A3O60309 1634 aa12.8□□□□□ -0.36
TRO-219ENST00000469211 THSD7AQ9UPZ6 1657 aa12.8□□□□□ -0.36
TRO-219ENST00000469211 TMPOP42166 694 aaKnown RBP12.79□□□□□ -0.36
TRO-219ENST00000469211 NFE2L2Q16236 605 aa12.79□□□□□ -0.36
TRO-219ENST00000469211 YTHDC1Q96MU7 727 aaKnown RBP12.79□□□□□ -0.36
TRO-219ENST00000469211 ADAMTS7Q9UKP4 1686 aa12.79□□□□□ -0.36
TRO-219ENST00000469211 TNS2Q63HR2 1409 aa12.79□□□□□ -0.36
TRO-219ENST00000469211 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
TRO-219ENST00000469211 SENP3-EIF4A1A0A087X0R7 540 aa12.78□□□□□ -0.36
TRO-219ENST00000469211 MTHFSDQ2M296 383 aaKnown RBP12.78□□□□□ -0.36
TRO-219ENST00000469211 THRAP3Q9Y2W1 955 aaKnown RBP12.78□□□□□ -0.36
TRO-219ENST00000469211 RRP7AQ9Y3A4 280 aaKnown RBP12.78□□□□□ -0.36
TRO-219ENST00000469211 IL2RBP14784 551 aa12.77□□□□□ -0.37
TRO-219ENST00000469211 TATP17735 454 aaPredicted RBP12.77□□□□□ -0.37
TRO-219ENST00000469211 CCDC27Q2M243 656 aa12.77□□□□□ -0.37
TRO-219ENST00000469211 GAS2L2Q8NHY3 880 aa12.77□□□□□ -0.37
TRO-219ENST00000469211 RAPGEF4Q8WZA2 1011 aa12.77□□□□□ -0.37
TRO-219ENST00000469211 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.371e-6■■□□□ 12.8
TRO-219ENST00000469211 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.37
TRO-219ENST00000469211 BARGINQ6ZT62 677 aa12.76□□□□□ -0.37
TRO-219ENST00000469211 NGEFQ8N5V2 710 aa12.76□□□□□ -0.37
TRO-219ENST00000469211 MAP3K5Q99683 1374 aa12.76□□□□□ -0.37
TRO-219ENST00000469211 AMOTQ4VCS5 1084 aa12.75□□□□□ -0.37
TRO-219ENST00000469211 DLG5Q8TDM6 1919 aa12.75□□□□□ -0.37
TRO-219ENST00000469211 USP35Q9P2H5 1018 aa12.75□□□□□ -0.37
TRO-219ENST00000469211 MRC1P22897 1456 aa12.74□□□□□ -0.37
TRO-219ENST00000469211 KDM6AO15550 1401 aaPredicted RBP12.74□□□□□ -0.37
TRO-219ENST00000469211 NEFMP07197 916 aa12.74□□□□□ -0.37
TRO-219ENST00000469211 RIPK4P57078 832 aa12.74□□□□□ -0.37
TRO-219ENST00000469211 PLEKHO1Q53GL0 409 aaPredicted RBP12.74□□□□□ -0.37
TRO-219ENST00000469211 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
TRO-219ENST00000469211 PROM2Q8N271 834 aa12.74□□□□□ -0.37
TRO-219ENST00000469211 CEMIPQ8WUJ3 1361 aa12.73□□□□□ -0.37
TRO-219ENST00000469211 CYP27B1O15528 508 aa12.73□□□□□ -0.37
TRO-219ENST00000469211 ONECUT3O60422 494 aaPredicted RBP12.73□□□□□ -0.37
TRO-219ENST00000469211 ZNF530Q6P9A1 599 aaPredicted RBP12.73□□□□□ -0.37
TRO-219ENST00000469211 SEPT12Q8IYM1 358 aa12.73□□□□□ -0.37
TRO-219ENST00000469211 CDCA7Q9BWT1 371 aaPredicted RBP12.73□□□□□ -0.37
TRO-219ENST00000469211 CCDC9Q9Y3X0 531 aaKnown RBP12.73□□□□□ -0.37
TRO-219ENST00000469211 PCDH11XQ9BZA7 1347 aa12.72□□□□□ -0.37
TRO-219ENST00000469211 PCDH11YQ9BZA8 1340 aa12.72□□□□□ -0.37
TRO-219ENST00000469211 TOGARAM1Q9Y4F4 1720 aa12.72□□□□□ -0.37
TRO-219ENST00000469211 PHKG2P15735 406 aa12.72□□□□□ -0.37
TRO-219ENST00000469211 NEUROD2Q15784 382 aa12.72□□□□□ -0.37
TRO-219ENST00000469211 FAM98CQ17RN3 349 aaKnown RBP12.72□□□□□ -0.37
TRO-219ENST00000469211 AKAP4Q5JQC9 854 aa12.72□□□□□ -0.37
TRO-219ENST00000469211 SPG7Q9UQ90 795 aa12.72□□□□□ -0.37
TRO-219ENST00000469211 SALL2Q9Y467 1007 aaPredicted RBP12.72□□□□□ -0.37
TRO-219ENST00000469211 GNAT3A8MTJ3 354 aa12.71□□□□□ -0.37
TRO-219ENST00000469211 HTATSF1O43719 755 aaKnown RBP12.71□□□□□ -0.37
TRO-219ENST00000469211 LMOD3Q0VAK6 560 aa12.71□□□□□ -0.37
TRO-219ENST00000469211 ZCRB1Q8TBF4 217 aaKnown RBP12.71□□□□□ -0.37
TRO-219ENST00000469211 DCTN1Q14203 1278 aa12.7□□□□□ -0.38
TRO-219ENST00000469211 THUMPD2Q9BTF0 503 aaKnown RBP12.7□□□□□ -0.38
TRO-219ENST00000469211 SPINK5Q9NQ38 1064 aaPredicted RBP12.7□□□□□ -0.38
TRO-219ENST00000469211 IL16Q14005 1332 aa12.69□□□□□ -0.38
TRO-219ENST00000469211 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
TRO-219ENST00000469211 MCM10Q7L590 875 aa12.69□□□□□ -0.38
TRO-219ENST00000469211 WDR63Q8IWG1 891 aa12.69□□□□□ -0.38
TRO-219ENST00000469211 IFNL2Q8IZJ0 200 aa12.69□□□□□ -0.38
TRO-219ENST00000469211 IL17REQ8NFR9 667 aa12.69□□□□□ -0.38
TRO-219ENST00000469211 SRCAPQ6ZRS2 3230 aa12.69□□□□□ -0.38
TRO-219ENST00000469211 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms