RNA–Protein interactions for RNA: ENST00000469147.5

TRAPPC12-215, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 1,002 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-215ENST00000469147 NBPF4Q96M43 638 aa13.01□□□□□ -0.33
TRAPPC12-215ENST00000469147 PROM2Q8N271 834 aa13□□□□□ -0.33
TRAPPC12-215ENST00000469147 YY1P25490 414 aa12.99□□□□□ -0.33
TRAPPC12-215ENST00000469147 RALBP1Q15311 655 aa12.99□□□□□ -0.33
TRAPPC12-215ENST00000469147 KAT6BQ8WYB5 2073 aa12.99□□□□□ -0.33
TRAPPC12-215ENST00000469147 LRP5O75197 1615 aa12.99□□□□□ -0.33
TRAPPC12-215ENST00000469147 OVOS2A0A0G2JMS6 1433 aa12.98□□□□□ -0.33
TRAPPC12-215ENST00000469147 NCAPD2Q15021 1401 aa12.98□□□□□ -0.33
TRAPPC12-215ENST00000469147 MTHFSP49914 203 aa12.98□□□□□ -0.33
TRAPPC12-215ENST00000469147 ACSBG1Q96GR2 724 aa12.98□□□□□ -0.33
TRAPPC12-215ENST00000469147 STK32BQ9NY57 414 aa12.98□□□□□ -0.33
TRAPPC12-215ENST00000469147 SHANK3Q9BYB0 1731 aa12.98□□□□□ -0.33
TRAPPC12-215ENST00000469147 PLSCR1O15162 318 aa12.97□□□□□ -0.33
TRAPPC12-215ENST00000469147 MEGF6O75095 1541 aa12.97□□□□□ -0.33
TRAPPC12-215ENST00000469147 PLEKHG2Q9H7P9 1386 aa12.96□□□□□ -0.33
TRAPPC12-215ENST00000469147 IL2RBP14784 551 aa12.96□□□□□ -0.33
TRAPPC12-215ENST00000469147 PPP2R1AP30153 589 aa12.96□□□□□ -0.33
TRAPPC12-215ENST00000469147 CNGB1Q14028 1251 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC12-215ENST00000469147 EIF4A2Q14240 407 aaKnown RBP12.96□□□□□ -0.33
TRAPPC12-215ENST00000469147 CFAP53Q96M91 514 aa12.95□□□□□ -0.34
TRAPPC12-215ENST00000469147 NUP188Q5SRE5 1749 aa12.95□□□□□ -0.34
TRAPPC12-215ENST00000469147 RREB1Q92766 1687 aa12.95□□□□□ -0.34
TRAPPC12-215ENST00000469147 TNS2Q63HR2 1409 aa12.95□□□□□ -0.34
TRAPPC12-215ENST00000469147 IGSF1Q8N6C5 1336 aa12.94□□□□□ -0.34
TRAPPC12-215ENST00000469147 COL3A1P02461 1466 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC12-215ENST00000469147 PDGFDQ9GZP0 370 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC12-215ENST00000469147 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC12-215ENST00000469147 MYBBP1AQ9BQG0 1328 aaKnown RBP12.93□□□□□ -0.34
TRAPPC12-215ENST00000469147 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
TRAPPC12-215ENST00000469147 ZBTB7AO95365 584 aa12.93□□□□□ -0.34
TRAPPC12-215ENST00000469147 IL13P35225 146 aa12.93□□□□□ -0.34
TRAPPC12-215ENST00000469147 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
TRAPPC12-215ENST00000469147 RAPGEF4Q8WZA2 1011 aa12.93□□□□□ -0.34
TRAPPC12-215ENST00000469147 EYA1Q99502 592 aa12.93□□□□□ -0.34
TRAPPC12-215ENST00000469147 PRKRIP1Q9H875 184 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC12-215ENST00000469147 ANO8Q9HCE9 1232 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC12-215ENST00000469147 BCL9O00512 1426 aa12.91□□□□□ -0.34
TRAPPC12-215ENST00000469147 KCNQ4P56696 695 aa12.91□□□□□ -0.34
TRAPPC12-215ENST00000469147 TXNRD1Q16881 649 aa12.91□□□□□ -0.34
TRAPPC12-215ENST00000469147 KDRP35968 1356 aa12.91□□□□□ -0.34
TRAPPC12-215ENST00000469147 TATP17735 454 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC12-215ENST00000469147 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
TRAPPC12-215ENST00000469147 BTAF1O14981 1849 aa12.9□□□□□ -0.34
TRAPPC12-215ENST00000469147 PKD1L3Q7Z443 1732 aa12.89□□□□□ -0.35
TRAPPC12-215ENST00000469147 SLC15A2Q16348 729 aa12.89□□□□□ -0.35
TRAPPC12-215ENST00000469147 KLHL34Q8N239 644 aa12.89□□□□□ -0.35
TRAPPC12-215ENST00000469147 LRRC4BQ9NT99 713 aa12.89□□□□□ -0.35
TRAPPC12-215ENST00000469147 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRAPPC12-215ENST00000469147 NHSQ6T4R5 1651 aa12.89□□□□□ -0.35
TRAPPC12-215ENST00000469147 CYP27B1O15528 508 aa12.88□□□□□ -0.35
TRAPPC12-215ENST00000469147 ANP32CO43423 234 aa12.88□□□□□ -0.35
TRAPPC12-215ENST00000469147 ZCRB1Q8TBF4 217 aaKnown RBP12.88□□□□□ -0.35
TRAPPC12-215ENST00000469147 SYTL4Q96C24 671 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-215ENST00000469147 PRIM1P49642 420 aaKnown RBP12.87□□□□□ -0.35
TRAPPC12-215ENST00000469147 SULT6B1Q6IMI4 303 aa12.87□□□□□ -0.35
TRAPPC12-215ENST00000469147 PCDH11XQ9BZA7 1347 aa12.87□□□□□ -0.35
TRAPPC12-215ENST00000469147 PCDH11YQ9BZA8 1340 aa12.87□□□□□ -0.35
TRAPPC12-215ENST00000469147 DOT1LQ8TEK3 1739 aa12.86□□□□□ -0.35
TRAPPC12-215ENST00000469147 TOGARAM1Q9Y4F4 1720 aa12.86□□□□□ -0.35
TRAPPC12-215ENST00000469147 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
TRAPPC12-215ENST00000469147 U2SURPO15042 1029 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-215ENST00000469147 MSH5O43196 834 aa12.85□□□□□ -0.35
TRAPPC12-215ENST00000469147 AMOTQ4VCS5 1084 aa12.85□□□□□ -0.35
TRAPPC12-215ENST00000469147 AEBP1Q8IUX7 1158 aa12.85□□□□□ -0.35
TRAPPC12-215ENST00000469147 MTFR1LQ9H019 292 aa12.85□□□□□ -0.35
TRAPPC12-215ENST00000469147 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-215ENST00000469147 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-215ENST00000469147 POLD1P28340 1107 aa12.83□□□□□ -0.36
TRAPPC12-215ENST00000469147 GPR162Q16538 588 aa12.83□□□□□ -0.36
TRAPPC12-215ENST00000469147 ZNF827Q17R98 1081 aa12.83□□□□□ -0.36
TRAPPC12-215ENST00000469147 ARXQ96QS3 562 aa12.83□□□□□ -0.36
TRAPPC12-215ENST00000469147 RGPD3A6NKT7 1758 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-215ENST00000469147 RGPD4Q7Z3J3 1758 aa12.83□□□□□ -0.36
TRAPPC12-215ENST00000469147 FCHSD2O94868 740 aa12.82□□□□□ -0.36
TRAPPC12-215ENST00000469147 HMOX1P09601 288 aa12.82□□□□□ -0.36
TRAPPC12-215ENST00000469147 U2AF1L5P0DN76 240 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-215ENST00000469147 U2AF1Q01081 240 aaKnown RBP eCLIP12.82□□□□□ -0.362e-6■□□□□ 9.2
TRAPPC12-215ENST00000469147 SMIM5Q71RC9 77 aa12.82□□□□□ -0.36
TRAPPC12-215ENST00000469147 FHDC1Q9C0D6 1143 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-215ENST00000469147 TFCP2L1Q9NZI6 479 aa12.82□□□□□ -0.36
TRAPPC12-215ENST00000469147 ITGB4P16144 1822 aa12.82□□□□□ -0.36
TRAPPC12-215ENST00000469147 PAPPAQ13219 1627 aa12.81□□□□□ -0.36
TRAPPC12-215ENST00000469147 IFNL2Q8IZJ0 200 aa12.81□□□□□ -0.36
TRAPPC12-215ENST00000469147 SYT17Q9BSW7 474 aa12.81□□□□□ -0.36
TRAPPC12-215ENST00000469147 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
TRAPPC12-215ENST00000469147 PNNQ9H307 717 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-215ENST00000469147 CASZ1Q86V15 1759 aa12.81□□□□□ -0.36
TRAPPC12-215ENST00000469147 HSP90AB1P08238 724 aaKnown RBP12.8□□□□□ -0.36
TRAPPC12-215ENST00000469147 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-215ENST00000469147 TUBGCP6Q96RT7 1819 aa12.8□□□□□ -0.36
TRAPPC12-215ENST00000469147 LY75O60449 1722 aa12.79□□□□□ -0.36
TRAPPC12-215ENST00000469147 PHKG2P15735 406 aa12.79□□□□□ -0.36
TRAPPC12-215ENST00000469147 C1orf141Q5JVX7 400 aa12.79□□□□□ -0.36
TRAPPC12-215ENST00000469147 ZNF530Q6P9A1 599 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC12-215ENST00000469147 AMIGO3Q86WK7 504 aa12.79□□□□□ -0.36
TRAPPC12-215ENST00000469147 NEFMP07197 916 aa12.78□□□□□ -0.36
TRAPPC12-215ENST00000469147 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
TRAPPC12-215ENST00000469147 PTGER2P43116 358 aa12.78□□□□□ -0.36
TRAPPC12-215ENST00000469147 WDR43Q15061 677 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAPPC12-215ENST00000469147 SLC27A3Q5K4L6 730 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms