RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 CGNL1Q0VF96 1302 aa20.54■□□□□ 0.88
SDCCAG3-209ENST00000468963 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
SDCCAG3-209ENST00000468963 EMILIN1Q9Y6C2 1016 aa20.53■□□□□ 0.88
SDCCAG3-209ENST00000468963 FLT4P35916 1363 aa20.53■□□□□ 0.88
SDCCAG3-209ENST00000468963 MYOM1P52179 1685 aa20.52■□□□□ 0.88
SDCCAG3-209ENST00000468963 ZNF827Q17R98 1081 aa20.52■□□□□ 0.88
SDCCAG3-209ENST00000468963 SLC27A3Q5K4L6 730 aa20.52■□□□□ 0.88
SDCCAG3-209ENST00000468963 RAPGEF4Q8WZA2 1011 aa20.52■□□□□ 0.88
SDCCAG3-209ENST00000468963 KIF20BQ96Q89 1820 aa20.51■□□□□ 0.87
SDCCAG3-209ENST00000468963 NSD2O96028 1365 aa20.51■□□□□ 0.87
SDCCAG3-209ENST00000468963 TATP17735 454 aaPredicted RBP20.51■□□□□ 0.87
SDCCAG3-209ENST00000468963 AKT1S1Q96B36 256 aa20.51■□□□□ 0.87
SDCCAG3-209ENST00000468963 SYTL4Q96C24 671 aaPredicted RBP20.51■□□□□ 0.87
SDCCAG3-209ENST00000468963 SGIP1Q9BQI5 828 aa20.51■□□□□ 0.87
SDCCAG3-209ENST00000468963 MTFR1LQ9H019 292 aa20.51■□□□□ 0.87
SDCCAG3-209ENST00000468963 SMG6Q86US8 1419 aaKnown RBP20.51■□□□□ 0.87
SDCCAG3-209ENST00000468963 PAPPAQ13219 1627 aa20.5■□□□□ 0.87
SDCCAG3-209ENST00000468963 SHANK3Q9BYB0 1731 aa20.5■□□□□ 0.87
SDCCAG3-209ENST00000468963 EIF4G2P78344 907 aaKnown RBP eCLIP20.49■□□□□ 0.87
SDCCAG3-209ENST00000468963 WASHC2AQ641Q2 1341 aa20.49■□□□□ 0.87
SDCCAG3-209ENST00000468963 HSPA5P11021 654 aaKnown RBP20.48■□□□□ 0.87
SDCCAG3-209ENST00000468963 KCNQ4P56696 695 aa20.47■□□□□ 0.87
SDCCAG3-209ENST00000468963 CCER1Q8TC90 406 aaPredicted RBP20.47■□□□□ 0.87
SDCCAG3-209ENST00000468963 PPM1GO15355 546 aaPredicted RBP20.46■□□□□ 0.87
SDCCAG3-209ENST00000468963 POLR3GLQ9BT43 218 aa20.46■□□□□ 0.87
SDCCAG3-209ENST00000468963 POLKQ9UBT6 870 aa20.46■□□□□ 0.87
SDCCAG3-209ENST00000468963 CYP27B1O15528 508 aa20.45■□□□□ 0.86
SDCCAG3-209ENST00000468963 SLC16A10Q8TF71 515 aa20.43■□□□□ 0.86
SDCCAG3-209ENST00000468963 EYA1Q99502 592 aa20.43■□□□□ 0.86
SDCCAG3-209ENST00000468963 SYT17Q9BSW7 474 aa20.43■□□□□ 0.86
SDCCAG3-209ENST00000468963 FHDC1Q9C0D6 1143 aaPredicted RBP20.43■□□□□ 0.86
SDCCAG3-209ENST00000468963 PANK3Q9H999 370 aa20.43■□□□□ 0.86
SDCCAG3-209ENST00000468963 DOT1LQ8TEK3 1739 aa20.43■□□□□ 0.86
SDCCAG3-209ENST00000468963 PCDH11XQ9BZA7 1347 aa20.43■□□□□ 0.86
SDCCAG3-209ENST00000468963 PCDH11YQ9BZA8 1340 aa20.43■□□□□ 0.86
SDCCAG3-209ENST00000468963 NCAPD2Q15021 1401 aa20.43■□□□□ 0.86
SDCCAG3-209ENST00000468963 MAP2P11137 1827 aaKnown RBP20.42■□□□□ 0.86
SDCCAG3-209ENST00000468963 DCAF8L1A6NGE4 600 aa20.42■□□□□ 0.86
SDCCAG3-209ENST00000468963 CCNL1Q9UK58 526 aaPredicted RBP20.42■□□□□ 0.86
SDCCAG3-209ENST00000468963 PNPLA7Q6ZV29 1317 aa20.42■□□□□ 0.86
SDCCAG3-209ENST00000468963 NKX1-1Q15270 411 aaPredicted RBP20.41■□□□□ 0.86
SDCCAG3-209ENST00000468963 ARXQ96QS3 562 aa20.41■□□□□ 0.86
SDCCAG3-209ENST00000468963 TFCP2L1Q9NZI6 479 aa20.41■□□□□ 0.86
SDCCAG3-209ENST00000468963 LY75O60449 1722 aa20.41■□□□□ 0.86
SDCCAG3-209ENST00000468963 UTRNP46939 3433 aa20.4■□□□□ 0.86
SDCCAG3-209ENST00000468963 YY1P25490 414 aa20.39■□□□□ 0.85
SDCCAG3-209ENST00000468963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.39■□□□□ 0.85
SDCCAG3-209ENST00000468963 TNNT2P45379 298 aaPredicted RBP20.38■□□□□ 0.85
SDCCAG3-209ENST00000468963 MPRIPQ6WCQ1 1025 aa20.38■□□□□ 0.85
SDCCAG3-209ENST00000468963 SPG7Q9UQ90 795 aa20.38■□□□□ 0.85
SDCCAG3-209ENST00000468963 ANKRD26Q9UPS8 1709 aa20.38■□□□□ 0.85
SDCCAG3-209ENST00000468963 EIF4A2Q14240 407 aaKnown RBP20.37■□□□□ 0.85
SDCCAG3-209ENST00000468963 QSER1Q2KHR3 1735 aa20.36■□□□□ 0.85
SDCCAG3-209ENST00000468963 COL23A1Q86Y22 540 aaPredicted RBP20.35■□□□□ 0.85
SDCCAG3-209ENST00000468963 PIGBQ92521 554 aa20.35■□□□□ 0.85
SDCCAG3-209ENST00000468963 MAP3K5Q99683 1374 aa20.34■□□□□ 0.85
SDCCAG3-209ENST00000468963 PKD1L3Q7Z443 1732 aa20.33■□□□□ 0.85
SDCCAG3-209ENST00000468963 SMARCC1Q92922 1105 aaPredicted RBP20.33■□□□□ 0.85
SDCCAG3-209ENST00000468963 PALLDQ8WX93 1383 aa20.33■□□□□ 0.84
SDCCAG3-209ENST00000468963 HMGB2P26583 209 aaKnown RBP20.32■□□□□ 0.84
SDCCAG3-209ENST00000468963 POLD1P28340 1107 aa20.32■□□□□ 0.84
SDCCAG3-209ENST00000468963 COL24A1Q17RW2 1714 aa20.32■□□□□ 0.84
SDCCAG3-209ENST00000468963 TUBGCP6Q96RT7 1819 aa20.32■□□□□ 0.84
SDCCAG3-209ENST00000468963 PHKG2P15735 406 aa20.31■□□□□ 0.84
SDCCAG3-209ENST00000468963 IFNL2Q8IZJ0 200 aa20.31■□□□□ 0.84
SDCCAG3-209ENST00000468963 ITGB4P16144 1822 aa20.3■□□□□ 0.84
SDCCAG3-209ENST00000468963 TOGARAM1Q9Y4F4 1720 aa20.3■□□□□ 0.84
SDCCAG3-209ENST00000468963 IGSF1Q8N6C5 1336 aa20.29■□□□□ 0.84
SDCCAG3-209ENST00000468963 MORC1Q86VD1 984 aa20.29■□□□□ 0.84
SDCCAG3-209ENST00000468963 MSH5O43196 834 aa20.28■□□□□ 0.84
SDCCAG3-209ENST00000468963 PLEKHG2Q9H7P9 1386 aa20.27■□□□□ 0.84
SDCCAG3-209ENST00000468963 FLAD1Q8NFF5 587 aa20.27■□□□□ 0.84
SDCCAG3-209ENST00000468963 TMOD3Q9NYL9 352 aa20.27■□□□□ 0.84
SDCCAG3-209ENST00000468963 KNSTRNQ9Y448 316 aa20.27■□□□□ 0.84
SDCCAG3-209ENST00000468963 AMER1Q5JTC6 1135 aaPredicted RBP20.26■□□□□ 0.83
SDCCAG3-209ENST00000468963 ASAP1Q9ULH1 1129 aa20.26■□□□□ 0.83
SDCCAG3-209ENST00000468963 GOLGB1Q14789 3259 aaKnown RBP20.26■□□□□ 0.83
SDCCAG3-209ENST00000468963 LOC102724428A0A0B4J2F2 783 aa20.25■□□□□ 0.83
SDCCAG3-209ENST00000468963 SIK1P57059 783 aa20.25■□□□□ 0.83
SDCCAG3-209ENST00000468963 AMIGO3Q86WK7 504 aa20.25■□□□□ 0.83
SDCCAG3-209ENST00000468963 ATG3Q9NT62 314 aa20.25■□□□□ 0.83
SDCCAG3-209ENST00000468963 TAF1LQ8IZX4 1826 aa20.25■□□□□ 0.83
SDCCAG3-209ENST00000468963 PLEKHO1Q53GL0 409 aaPredicted RBP20.24■□□□□ 0.83
SDCCAG3-209ENST00000468963 KIF7Q2M1P5 1343 aa20.24■□□□□ 0.83
SDCCAG3-209ENST00000468963 C5P01031 1676 aa20.23■□□□□ 0.83
SDCCAG3-209ENST00000468963 ERVV-2B6SEH9 535 aa20.23■□□□□ 0.83
SDCCAG3-209ENST00000468963 KLHL34Q8N239 644 aa20.23■□□□□ 0.83
SDCCAG3-209ENST00000468963 PER1O15534 1290 aaPredicted RBP20.22■□□□□ 0.83
SDCCAG3-209ENST00000468963 IL13P35225 146 aa20.22■□□□□ 0.83
SDCCAG3-209ENST00000468963 MSL1Q68DK7 614 aa20.22■□□□□ 0.83
SDCCAG3-209ENST00000468963 LINC00116Q8NCU8 138 aa20.22■□□□□ 0.83
SDCCAG3-209ENST00000468963 NLGN2Q8NFZ4 835 aa20.22■□□□□ 0.83
SDCCAG3-209ENST00000468963 AK7Q96M32 723 aa20.22■□□□□ 0.83
SDCCAG3-209ENST00000468963 ITPK1Q13572 414 aa20.21■□□□□ 0.83
SDCCAG3-209ENST00000468963 GPR162Q16538 588 aa20.21■□□□□ 0.83
SDCCAG3-209ENST00000468963 AMOTQ4VCS5 1084 aa20.21■□□□□ 0.83
SDCCAG3-209ENST00000468963 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
SDCCAG3-209ENST00000468963 AEBP1Q8IUX7 1158 aa20.21■□□□□ 0.83
SDCCAG3-209ENST00000468963 C4BP0C0L5 1744 aa20.2■□□□□ 0.82
SDCCAG3-209ENST00000468963 HSP90AB1P08238 724 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms