RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 FNBP4Q8N3X1 1017 aaPredicted RBP23.02■■□□□ 1.28
RPL39-202ENST00000468844 RAPGEF4Q8WZA2 1011 aa23.02■■□□□ 1.28
RPL39-202ENST00000468844 USP35Q9P2H5 1018 aa23.02■■□□□ 1.28
RPL39-202ENST00000468844 PLEKHG2Q9H7P9 1386 aa23.01■■□□□ 1.27
RPL39-202ENST00000468844 MEX3CQ5U5Q3 659 aaKnown RBP23■■□□□ 1.27
RPL39-202ENST00000468844 OVOS2A0A0G2JMS6 1433 aa23■■□□□ 1.27
RPL39-202ENST00000468844 UNC5CLQ8IV45 518 aa23■■□□□ 1.27
RPL39-202ENST00000468844 GAS2L2Q8NHY3 880 aa23■■□□□ 1.27
RPL39-202ENST00000468844 LRRC37A3O60309 1634 aa22.99■■□□□ 1.27
RPL39-202ENST00000468844 SCN11AQ9UI33 1791 aa22.98■■□□□ 1.27
RPL39-202ENST00000468844 TATP17735 454 aaPredicted RBP22.98■■□□□ 1.27
RPL39-202ENST00000468844 DISP2A7MBM2 1401 aa22.97■■□□□ 1.27
RPL39-202ENST00000468844 AMOTQ4VCS5 1084 aa22.97■■□□□ 1.27
RPL39-202ENST00000468844 SPATA31A1Q5TZJ5 1347 aa22.97■■□□□ 1.27
RPL39-202ENST00000468844 CDCA7LQ96GN5 454 aa22.97■■□□□ 1.27
RPL39-202ENST00000468844 PLEKHO1Q53GL0 409 aaPredicted RBP22.96■■□□□ 1.27
RPL39-202ENST00000468844 ADAMTS7Q9UKP4 1686 aa22.96■■□□□ 1.27
RPL39-202ENST00000468844 SPATA31A5Q5VU36 1347 aa22.96■■□□□ 1.27
RPL39-202ENST00000468844 SPATA31A7Q8IWB4 1347 aa22.96■■□□□ 1.27
RPL39-202ENST00000468844 IL2RBP14784 551 aa22.96■■□□□ 1.27
RPL39-202ENST00000468844 USP21Q9UK80 565 aa22.96■■□□□ 1.27
RPL39-202ENST00000468844 GOLGA2Q08379 1002 aa22.95■■□□□ 1.26
RPL39-202ENST00000468844 PDE3BQ13370 1112 aa22.95■■□□□ 1.26
RPL39-202ENST00000468844 MAP3K5Q99683 1374 aa22.95■■□□□ 1.26
RPL39-202ENST00000468844 AFF2P51816 1311 aa22.94■■□□□ 1.26
RPL39-202ENST00000468844 SPINK5Q9NQ38 1064 aaPredicted RBP22.94■■□□□ 1.26
RPL39-202ENST00000468844 KAT6BQ8WYB5 2073 aa22.94■■□□□ 1.26
RPL39-202ENST00000468844 LMOD3Q0VAK6 560 aa22.94■■□□□ 1.26
RPL39-202ENST00000468844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.94■■□□□ 1.26
RPL39-202ENST00000468844 DCTN1Q14203 1278 aa22.93■■□□□ 1.26
RPL39-202ENST00000468844 ZNF530Q6P9A1 599 aaPredicted RBP22.93■■□□□ 1.26
RPL39-202ENST00000468844 WDR63Q8IWG1 891 aa22.93■■□□□ 1.26
RPL39-202ENST00000468844 SIPA1L3O60292 1781 aaPredicted RBP22.93■■□□□ 1.26
RPL39-202ENST00000468844 GNAT3A8MTJ3 354 aa22.92■■□□□ 1.26
RPL39-202ENST00000468844 VPS72Q15906 364 aa22.92■■□□□ 1.26
RPL39-202ENST00000468844 THUMPD2Q9BTF0 503 aaKnown RBP22.92■■□□□ 1.26
RPL39-202ENST00000468844 GLI3P10071 1580 aa22.92■■□□□ 1.26
RPL39-202ENST00000468844 MCM10Q7L590 875 aa22.91■■□□□ 1.26
RPL39-202ENST00000468844 THRAP3Q9Y2W1 955 aaKnown RBP22.91■■□□□ 1.26
RPL39-202ENST00000468844 AKAP4Q5JQC9 854 aa22.9■■□□□ 1.26
RPL39-202ENST00000468844 SPG7Q9UQ90 795 aa22.9■■□□□ 1.26
RPL39-202ENST00000468844 CCDC9Q9Y3X0 531 aaKnown RBP22.9■■□□□ 1.26
RPL39-202ENST00000468844 SLFN5Q08AF3 891 aa22.89■■□□□ 1.25
RPL39-202ENST00000468844 RTF1Q92541 710 aaKnown RBP22.89■■□□□ 1.25
RPL39-202ENST00000468844 CYP27B1O15528 508 aa22.88■■□□□ 1.25
RPL39-202ENST00000468844 HTATSF1O43719 755 aaKnown RBP22.88■■□□□ 1.25
RPL39-202ENST00000468844 ZCRB1Q8TBF4 217 aaKnown RBP22.88■■□□□ 1.25
RPL39-202ENST00000468844 C1orf141Q5JVX7 400 aa22.88■■□□□ 1.25
RPL39-202ENST00000468844 ATRNO75882 1429 aa22.88■■□□□ 1.25
RPL39-202ENST00000468844 E9PSI1 815 aa22.87■■□□□ 1.25
RPL39-202ENST00000468844 PHKG2P15735 406 aa22.87■■□□□ 1.25
RPL39-202ENST00000468844 TRMT2AQ8IZ69 625 aaKnown RBP22.87■■□□□ 1.25
RPL39-202ENST00000468844 IL17REQ8NFR9 667 aa22.87■■□□□ 1.25
RPL39-202ENST00000468844 THSD7AQ9UPZ6 1657 aa22.87■■□□□ 1.25
RPL39-202ENST00000468844 IL16Q14005 1332 aa22.87■■□□□ 1.25
RPL39-202ENST00000468844 PCDH11XQ9BZA7 1347 aa22.87■■□□□ 1.25
RPL39-202ENST00000468844 PCDH11YQ9BZA8 1340 aa22.87■■□□□ 1.25
RPL39-202ENST00000468844 TOGARAM1Q9Y4F4 1720 aa22.87■■□□□ 1.25
RPL39-202ENST00000468844 EP400Q96L91 3159 aa22.87■■□□□ 1.25
RPL39-202ENST00000468844 CEMIPQ8WUJ3 1361 aa22.87■■□□□ 1.25
RPL39-202ENST00000468844 DUSP27Q5VZP5 1158 aa22.86■■□□□ 1.25
RPL39-202ENST00000468844 TNS2Q63HR2 1409 aa22.86■■□□□ 1.25
RPL39-202ENST00000468844 BARGINQ6ZT62 677 aa22.86■■□□□ 1.25
RPL39-202ENST00000468844 IFNL2Q8IZJ0 200 aa22.86■■□□□ 1.25
RPL39-202ENST00000468844 KDM6AO15550 1401 aaPredicted RBP22.85■■□□□ 1.25
RPL39-202ENST00000468844 MPRIPQ6WCQ1 1025 aa22.85■■□□□ 1.25
RPL39-202ENST00000468844 ITGB4P16144 1822 aa22.85■■□□□ 1.25
RPL39-202ENST00000468844 KDM3BQ7LBC6 1761 aa22.85■■□□□ 1.25
RPL39-202ENST00000468844 LGR6Q9HBX8 967 aa22.84■■□□□ 1.25
RPL39-202ENST00000468844 CALD1Q05682 793 aaKnown RBP22.84■■□□□ 1.25
RPL39-202ENST00000468844 CDCA7Q9BWT1 371 aaPredicted RBP22.84■■□□□ 1.25
RPL39-202ENST00000468844 FAM98CQ17RN3 349 aaKnown RBP22.82■■□□□ 1.24
RPL39-202ENST00000468844 TRPC5Q9UL62 973 aaPredicted RBP22.82■■□□□ 1.24
RPL39-202ENST00000468844 ZNF853P0CG23 659 aa22.82■■□□□ 1.24
RPL39-202ENST00000468844 GJD4Q96KN9 370 aaPredicted RBP22.82■■□□□ 1.24
RPL39-202ENST00000468844 TSR2Q969E8 191 aaKnown RBP22.81■■□□□ 1.24
RPL39-202ENST00000468844 CFAP44Q96MT7 982 aa22.81■■□□□ 1.24
RPL39-202ENST00000468844 IFT57Q9NWB7 429 aa22.81■■□□□ 1.24
RPL39-202ENST00000468844 FANCIQ9NVI1 1328 aa22.81■■□□□ 1.24
RPL39-202ENST00000468844 RNMTO43148 476 aaKnown RBP22.8■■□□□ 1.24
RPL39-202ENST00000468844 DDX54Q8TDD1 881 aaKnown RBP22.8■■□□□ 1.24
RPL39-202ENST00000468844 MYH16Q9H6N6 1097 aa22.8■■□□□ 1.24
RPL39-202ENST00000468844 DOT1LQ8TEK3 1739 aa22.8■■□□□ 1.24
RPL39-202ENST00000468844 MRC1P22897 1456 aa22.8■■□□□ 1.24
RPL39-202ENST00000468844 LAS1LQ9Y4W2 734 aaKnown RBP22.8■■□□□ 1.24
RPL39-202ENST00000468844 BRWD3Q6RI45 1802 aa22.79■■□□□ 1.24
RPL39-202ENST00000468844 EXOC5O00471 708 aa22.79■■□□□ 1.24
RPL39-202ENST00000468844 GNAI1P63096 354 aa22.79■■□□□ 1.24
RPL39-202ENST00000468844 GTF3C3Q9Y5Q9 886 aa22.79■■□□□ 1.24
RPL39-202ENST00000468844 DDB1Q16531 1140 aa22.78■■□□□ 1.24
RPL39-202ENST00000468844 QTRT2Q9H974 415 aaKnown RBP22.78■■□□□ 1.24
RPL39-202ENST00000468844 DCAF5Q96JK2 942 aa22.78■■□□□ 1.24
RPL39-202ENST00000468844 HSP90AB1P08238 724 aaKnown RBP22.77■■□□□ 1.24
RPL39-202ENST00000468844 NKX1-1Q15270 411 aaPredicted RBP22.77■■□□□ 1.24
RPL39-202ENST00000468844 MBIPQ9NS73 344 aa22.77■■□□□ 1.24
RPL39-202ENST00000468844 CHL1O00533 1208 aa22.76■■□□□ 1.23
RPL39-202ENST00000468844 TEFQ10587 303 aa22.75■■□□□ 1.23
RPL39-202ENST00000468844 ZNF772Q68DY9 489 aaPredicted RBP22.74■■□□□ 1.23
RPL39-202ENST00000468844 MIS18AQ9NYP9 233 aa22.74■■□□□ 1.23
RPL39-202ENST00000468844 TAF7Q15545 349 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms