RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 PHLPP1O60346 1717 aa10.8□□□□□ -0.68
BRCA1-208ENST00000468300 ERBB3P21860 1342 aa10.8□□□□□ -0.68
BRCA1-208ENST00000468300 FANCIQ9NVI1 1328 aa10.8□□□□□ -0.68
BRCA1-208ENST00000468300 CRB1P82279 1406 aa10.79□□□□□ -0.68
BRCA1-208ENST00000468300 RRP1P56182 461 aaKnown RBP10.79□□□□□ -0.68
BRCA1-208ENST00000468300 ANKRD24Q8TF21 1146 aa10.79□□□□□ -0.68
BRCA1-208ENST00000468300 TSR2Q969E8 191 aaKnown RBP10.79□□□□□ -0.68
BRCA1-208ENST00000468300 ADAMTS7Q9UKP4 1686 aa10.79□□□□□ -0.68
BRCA1-208ENST00000468300 DCTN1Q14203 1278 aa10.79□□□□□ -0.68
BRCA1-208ENST00000468300 TAF7LQ5H9L4 462 aa10.78□□□□□ -0.68
BRCA1-208ENST00000468300 ZBTB7CA1YPR0 619 aa10.77□□□□□ -0.68
BRCA1-208ENST00000468300 CHRNA2Q15822 529 aa10.77□□□□□ -0.68
BRCA1-208ENST00000468300 ANP32EQ9BTT0 268 aa10.77□□□□□ -0.68
BRCA1-208ENST00000468300 PKD1L3Q7Z443 1732 aa10.77□□□□□ -0.69
BRCA1-208ENST00000468300 PLIN1O60240 522 aa10.77□□□□□ -0.69
BRCA1-208ENST00000468300 CCDC136Q96JN2 1154 aa10.77□□□□□ -0.69
BRCA1-208ENST00000468300 BCAR3O75815 825 aa10.76□□□□□ -0.69
BRCA1-208ENST00000468300 SIPA1L3O60292 1781 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-208ENST00000468300 COL5A2P05997 1499 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-208ENST00000468300 SHANK3Q9BYB0 1731 aa10.76□□□□□ -0.69
BRCA1-208ENST00000468300 SAMD1Q6SPF0 538 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-208ENST00000468300 MCM10Q7L590 875 aa10.76□□□□□ -0.69
BRCA1-208ENST00000468300 C20orf194Q5TEA3 1177 aa10.75□□□□□ -0.69
BRCA1-208ENST00000468300 MYH16Q9H6N6 1097 aa10.75□□□□□ -0.69
BRCA1-208ENST00000468300 MEGF6O75095 1541 aa10.75□□□□□ -0.69
BRCA1-208ENST00000468300 RARSP54136 660 aaKnown RBP10.75□□□□□ -0.69
BRCA1-208ENST00000468300 MBIPQ9NS73 344 aa10.75□□□□□ -0.69
BRCA1-208ENST00000468300 IFT57Q9NWB7 429 aa10.75□□□□□ -0.69
BRCA1-208ENST00000468300 EXOSC9Q06265 439 aaKnown RBP10.75□□□□□ -0.69
BRCA1-208ENST00000468300 COL14A1Q05707 1796 aaKnown RBP10.74□□□□□ -0.69
BRCA1-208ENST00000468300 CFAP44Q96MT7 982 aa10.74□□□□□ -0.69
BRCA1-208ENST00000468300 KDM3BQ7LBC6 1761 aa10.74□□□□□ -0.69
BRCA1-208ENST00000468300 A0A0U1RQG5 324 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-208ENST00000468300 CEMIPQ8WUJ3 1361 aa10.74□□□□□ -0.69
BRCA1-208ENST00000468300 PLCH1Q4KWH8 1693 aa10.73□□□□□ -0.69
BRCA1-208ENST00000468300 NEFMP07197 916 aa10.73□□□□□ -0.69
BRCA1-208ENST00000468300 IL17REQ8NFR9 667 aa10.73□□□□□ -0.69
BRCA1-208ENST00000468300 NRAPQ86VF7 1730 aa10.73□□□□□ -0.69
BRCA1-208ENST00000468300 CHL1O00533 1208 aa10.73□□□□□ -0.69
BRCA1-208ENST00000468300 LMOD3Q0VAK6 560 aa10.73□□□□□ -0.69
BRCA1-208ENST00000468300 MAP3K5Q99683 1374 aa10.73□□□□□ -0.69
BRCA1-208ENST00000468300 ERICH6BQ5W0A0 696 aa10.73□□□□□ -0.69
BRCA1-208ENST00000468300 TSPYL6Q8N831 410 aa10.73□□□□□ -0.69
BRCA1-208ENST00000468300 GAS2L2Q8NHY3 880 aa10.73□□□□□ -0.69
BRCA1-208ENST00000468300 SCN11AQ9UI33 1791 aa10.72□□□□□ -0.69
BRCA1-208ENST00000468300 HTATSF1O43719 755 aaKnown RBP10.72□□□□□ -0.69
BRCA1-208ENST00000468300 PARP4Q9UKK3 1724 aaKnown RBP10.72□□□□□ -0.69
BRCA1-208ENST00000468300 WNK3Q9BYP7 1800 aa10.71□□□□□ -0.69
BRCA1-208ENST00000468300 GNAT3A8MTJ3 354 aa10.71□□□□□ -0.69
BRCA1-208ENST00000468300 GNAI1P63096 354 aa10.71□□□□□ -0.69
BRCA1-208ENST00000468300 WDR17Q8IZU2 1322 aa10.71□□□□□ -0.7
BRCA1-208ENST00000468300 VAMP4O75379 141 aa10.71□□□□□ -0.7
BRCA1-208ENST00000468300 BRD2P25440 801 aaKnown RBP10.71□□□□□ -0.7
BRCA1-208ENST00000468300 C8orf58Q8NAV2 365 aa10.71□□□□□ -0.7
BRCA1-208ENST00000468300 PLEKHG2Q9H7P9 1386 aa10.7□□□□□ -0.7
BRCA1-208ENST00000468300 CT47B1P0C2W7 299 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-208ENST00000468300 FGD1P98174 961 aa10.7□□□□□ -0.7
BRCA1-208ENST00000468300 EXOC6Q8TAG9 804 aa10.7□□□□□ -0.7
BRCA1-208ENST00000468300 LGR6Q9HBX8 967 aa10.7□□□□□ -0.7
BRCA1-208ENST00000468300 PRDM11Q9NQV5 511 aa10.7□□□□□ -0.7
BRCA1-208ENST00000468300 FBXO3Q9UK99 471 aa10.7□□□□□ -0.7
BRCA1-208ENST00000468300 TNNQ9UQP3 1299 aa10.7□□□□□ -0.7
BRCA1-208ENST00000468300 TOM1O60784 492 aa10.69□□□□□ -0.7
BRCA1-208ENST00000468300 CALD1Q05682 793 aaKnown RBP10.69□□□□□ -0.7
BRCA1-208ENST00000468300 TMEM132AQ24JP5 1023 aa10.69□□□□□ -0.7
BRCA1-208ENST00000468300 LAS1LQ9Y4W2 734 aaKnown RBP10.69□□□□□ -0.7
BRCA1-208ENST00000468300 OVOS2A0A0G2JMS6 1433 aa10.69□□□□□ -0.7
BRCA1-208ENST00000468300 KRT24Q2M2I5 525 aa10.69□□□□□ -0.7
BRCA1-208ENST00000468300 SSH1Q8WYL5 1049 aa10.69□□□□□ -0.7
BRCA1-208ENST00000468300 MIS18AQ9NYP9 233 aa10.69□□□□□ -0.7
BRCA1-208ENST00000468300 KDM6AO15550 1401 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-208ENST00000468300 NLRP2Q9NX02 1062 aa10.69□□□□□ -0.7
BRCA1-208ENST00000468300 CDK11BP21127 795 aaKnown RBP10.68□□□□□ -0.7
BRCA1-208ENST00000468300 PIP4K2BP78356 416 aa10.68□□□□□ -0.7
BRCA1-208ENST00000468300 AKAP4Q5JQC9 854 aa10.68□□□□□ -0.7
BRCA1-208ENST00000468300 BCL2L13Q9BXK5 485 aa10.68□□□□□ -0.7
BRCA1-208ENST00000468300 AMOTQ4VCS5 1084 aa10.68□□□□□ -0.7
BRCA1-208ENST00000468300 LARP1Q6PKG0 1096 aaKnown RBP10.68□□□□□ -0.7
BRCA1-208ENST00000468300 CRBNQ96SW2 442 aa10.68□□□□□ -0.7
BRCA1-208ENST00000468300 BRPF1P55201 1214 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-208ENST00000468300 PLCB2Q00722 1185 aa10.68□□□□□ -0.7
BRCA1-208ENST00000468300 PPP4R2Q9NY27 417 aa10.68□□□□□ -0.7
BRCA1-208ENST00000468300 MRC1P22897 1456 aa10.67□□□□□ -0.7
BRCA1-208ENST00000468300 RLBP1P12271 317 aa10.67□□□□□ -0.7
BRCA1-208ENST00000468300 PLEKHO1Q53GL0 409 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-208ENST00000468300 CERKQ8TCT0 537 aa10.67□□□□□ -0.7
BRCA1-208ENST00000468300 NWD2Q9ULI1 1742 aa10.67□□□□□ -0.7
BRCA1-208ENST00000468300 TOGARAM1Q9Y4F4 1720 aa10.66□□□□□ -0.7
BRCA1-208ENST00000468300 UBAP1LF5GYI3 381 aa10.66□□□□□ -0.7
BRCA1-208ENST00000468300 ZNF530Q6P9A1 599 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-208ENST00000468300 DISP2A7MBM2 1401 aa10.66□□□□□ -0.7
BRCA1-208ENST00000468300 GLI3P10071 1580 aa10.66□□□□□ -0.7
BRCA1-208ENST00000468300 CARD10Q9BWT7 1032 aa10.66□□□□□ -0.7
BRCA1-208ENST00000468300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.66□□□□□ -0.74e-6■■■■■ 27.4
BRCA1-208ENST00000468300 CYP27B1O15528 508 aa10.66□□□□□ -0.7
BRCA1-208ENST00000468300 RNMTO43148 476 aaKnown RBP10.66□□□□□ -0.7
BRCA1-208ENST00000468300 ALDH1L2Q3SY69 923 aa10.66□□□□□ -0.7
BRCA1-208ENST00000468300 RTF1Q92541 710 aaKnown RBP10.66□□□□□ -0.7
BRCA1-208ENST00000468300 TWISTNBQ3B726 338 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-208ENST00000468300 MPRIPQ6WCQ1 1025 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms