RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 GLI3P10071 1580 aa15.66■□□□□ 0.1
RNF13-208ENST00000467996 PLEKHG2Q9H7P9 1386 aa15.66■□□□□ 0.1
RNF13-208ENST00000467996 APAF1O14727 1248 aa15.66■□□□□ 0.1
RNF13-208ENST00000467996 TCP11L2Q8N4U5 519 aa15.66■□□□□ 0.1
RNF13-208ENST00000467996 SPATA31A1Q5TZJ5 1347 aa15.66■□□□□ 0.1
RNF13-208ENST00000467996 SPATA31A5Q5VU36 1347 aa15.66■□□□□ 0.1
RNF13-208ENST00000467996 SPATA31A7Q8IWB4 1347 aa15.66■□□□□ 0.1
RNF13-208ENST00000467996 KCNA4P22459 653 aa15.65■□□□□ 0.1
RNF13-208ENST00000467996 VPS72Q15906 364 aa15.65■□□□□ 0.1
RNF13-208ENST00000467996 RAPGEF4Q8WZA2 1011 aa15.65■□□□□ 0.1
RNF13-208ENST00000467996 USP35Q9P2H5 1018 aa15.65■□□□□ 0.1
RNF13-208ENST00000467996 ATRNO75882 1429 aa15.65■□□□□ 0.1
RNF13-208ENST00000467996 THSD7AQ9UPZ6 1657 aa15.64■□□□□ 0.09
RNF13-208ENST00000467996 TATP17735 454 aaPredicted RBP15.64■□□□□ 0.09
RNF13-208ENST00000467996 RRP7AQ9Y3A4 280 aaKnown RBP15.64■□□□□ 0.09
RNF13-208ENST00000467996 IL2RBP14784 551 aa15.63■□□□□ 0.09
RNF13-208ENST00000467996 TMPOP42166 694 aaKnown RBP15.63■□□□□ 0.09
RNF13-208ENST00000467996 NFE2L2Q16236 605 aa15.63■□□□□ 0.09
RNF13-208ENST00000467996 MTHFSDQ2M296 383 aaKnown RBP15.62■□□□□ 0.09
RNF13-208ENST00000467996 GAS2L2Q8NHY3 880 aa15.62■□□□□ 0.09
RNF13-208ENST00000467996 THRAP3Q9Y2W1 955 aaKnown RBP15.62■□□□□ 0.09
RNF13-208ENST00000467996 CCDC9Q9Y3X0 531 aaKnown RBP15.62■□□□□ 0.09
RNF13-208ENST00000467996 ADAMTS7Q9UKP4 1686 aa15.62■□□□□ 0.09
RNF13-208ENST00000467996 ZBED9Q6R2W3 1325 aa15.62■□□□□ 0.09
RNF13-208ENST00000467996 SCN11AQ9UI33 1791 aa15.62■□□□□ 0.09
RNF13-208ENST00000467996 NEUROD2Q15784 382 aa15.61■□□□□ 0.09
RNF13-208ENST00000467996 PLEKHO1Q53GL0 409 aaPredicted RBP15.61■□□□□ 0.09
RNF13-208ENST00000467996 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
RNF13-208ENST00000467996 AMOTQ4VCS5 1084 aa15.6■□□□□ 0.09
RNF13-208ENST00000467996 NGEFQ8N5V2 710 aa15.6■□□□□ 0.09
RNF13-208ENST00000467996 TRPC5Q9UL62 973 aaPredicted RBP15.6■□□□□ 0.09
RNF13-208ENST00000467996 MAP3K5Q99683 1374 aa15.6■□□□□ 0.09
RNF13-208ENST00000467996 TNS2Q63HR2 1409 aa15.6■□□□□ 0.09
RNF13-208ENST00000467996 RIPK4P57078 832 aa15.59■□□□□ 0.09
RNF13-208ENST00000467996 BARGINQ6ZT62 677 aa15.59■□□□□ 0.09
RNF13-208ENST00000467996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.59■□□□□ 0.092e-7■□□□□ 9.4
RNF13-208ENST00000467996 TOGARAM1Q9Y4F4 1720 aa15.58■□□□□ 0.08
RNF13-208ENST00000467996 SIPA1L3O60292 1781 aaPredicted RBP15.58■□□□□ 0.08
RNF13-208ENST00000467996 CCDC27Q2M243 656 aa15.58■□□□□ 0.08
RNF13-208ENST00000467996 ZNF530Q6P9A1 599 aaPredicted RBP15.58■□□□□ 0.08
RNF13-208ENST00000467996 TRIM35Q9UPQ4 493 aa15.58■□□□□ 0.08
RNF13-208ENST00000467996 SPG7Q9UQ90 795 aa15.58■□□□□ 0.08
RNF13-208ENST00000467996 ZNF521Q96K83 1311 aa15.58■□□□□ 0.08
RNF13-208ENST00000467996 GJD4Q96KN9 370 aaPredicted RBP15.57■□□□□ 0.08
RNF13-208ENST00000467996 CDCA7Q9BWT1 371 aaPredicted RBP15.57■□□□□ 0.08
RNF13-208ENST00000467996 LMOD3Q0VAK6 560 aa15.56■□□□□ 0.08
RNF13-208ENST00000467996 FAM98CQ17RN3 349 aaKnown RBP15.56■□□□□ 0.08
RNF13-208ENST00000467996 AKAP4Q5JQC9 854 aa15.56■□□□□ 0.08
RNF13-208ENST00000467996 ZNF772Q68DY9 489 aaPredicted RBP15.56■□□□□ 0.08
RNF13-208ENST00000467996 WWC1Q8IX03 1113 aa15.56■□□□□ 0.08
RNF13-208ENST00000467996 ZCRB1Q8TBF4 217 aaKnown RBP15.56■□□□□ 0.08
RNF13-208ENST00000467996 PCDH11XQ9BZA7 1347 aa15.56■□□□□ 0.08
RNF13-208ENST00000467996 PCDH11YQ9BZA8 1340 aa15.56■□□□□ 0.08
RNF13-208ENST00000467996 DOT1LQ8TEK3 1739 aa15.56■□□□□ 0.08
RNF13-208ENST00000467996 BRWD3Q6RI45 1802 aa15.56■□□□□ 0.08
RNF13-208ENST00000467996 GNAT3A8MTJ3 354 aa15.55■□□□□ 0.08
RNF13-208ENST00000467996 C1orf141Q5JVX7 400 aa15.55■□□□□ 0.08
RNF13-208ENST00000467996 QTRT2Q9H974 415 aaKnown RBP15.55■□□□□ 0.08
RNF13-208ENST00000467996 KDM6AO15550 1401 aaPredicted RBP15.54■□□□□ 0.08
RNF13-208ENST00000467996 CYP27B1O15528 508 aa15.54■□□□□ 0.08
RNF13-208ENST00000467996 PHKG2P15735 406 aa15.54■□□□□ 0.08
RNF13-208ENST00000467996 MRC1P22897 1456 aa15.53■□□□□ 0.08
RNF13-208ENST00000467996 ITGB4P16144 1822 aa15.53■□□□□ 0.08
RNF13-208ENST00000467996 HTATSF1O43719 755 aaKnown RBP15.53■□□□□ 0.08
RNF13-208ENST00000467996 DCTN1Q14203 1278 aa15.53■□□□□ 0.08
RNF13-208ENST00000467996 MCM10Q7L590 875 aa15.53■□□□□ 0.08
RNF13-208ENST00000467996 IFNL2Q8IZJ0 200 aa15.53■□□□□ 0.08
RNF13-208ENST00000467996 THUMPD2Q9BTF0 503 aaKnown RBP15.53■□□□□ 0.08
RNF13-208ENST00000467996 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
RNF13-208ENST00000467996 KDM3BQ7LBC6 1761 aa15.52■□□□□ 0.08
RNF13-208ENST00000467996 CEMIPQ8WUJ3 1361 aa15.52■□□□□ 0.08
RNF13-208ENST00000467996 HOXD11P31277 338 aaPredicted RBP15.52■□□□□ 0.08
RNF13-208ENST00000467996 DDB1Q16531 1140 aa15.52■□□□□ 0.08
RNF13-208ENST00000467996 RTF1Q92541 710 aaKnown RBP15.52■□□□□ 0.08
RNF13-208ENST00000467996 EXOC5O00471 708 aa15.51■□□□□ 0.07
RNF13-208ENST00000467996 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
RNF13-208ENST00000467996 WDR63Q8IWG1 891 aa15.51■□□□□ 0.07
RNF13-208ENST00000467996 RGS17Q9UGC6 210 aaPredicted RBP15.51■□□□□ 0.07
RNF13-208ENST00000467996 A0A0G2JS52 829 aa15.5■□□□□ 0.07
RNF13-208ENST00000467996 MYT1Q01538 1121 aa15.5■□□□□ 0.07
RNF13-208ENST00000467996 GOLGA2Q08379 1002 aa15.5■□□□□ 0.07
RNF13-208ENST00000467996 MPRIPQ6WCQ1 1025 aa15.5■□□□□ 0.07
RNF13-208ENST00000467996 IL17REQ8NFR9 667 aa15.5■□□□□ 0.07
RNF13-208ENST00000467996 DDX54Q8TDD1 881 aaKnown RBP15.5■□□□□ 0.07
RNF13-208ENST00000467996 PAPPAQ13219 1627 aa15.5■□□□□ 0.07
RNF13-208ENST00000467996 RNMTO43148 476 aaKnown RBP15.49■□□□□ 0.07
RNF13-208ENST00000467996 ONECUT3O60422 494 aaPredicted RBP15.49■□□□□ 0.07
RNF13-208ENST00000467996 HSP90AB1P08238 724 aaKnown RBP15.49■□□□□ 0.07
RNF13-208ENST00000467996 PDE3BQ13370 1112 aa15.49■□□□□ 0.07
RNF13-208ENST00000467996 CDCA7LQ96GN5 454 aa15.49■□□□□ 0.07
RNF13-208ENST00000467996 LGR6Q9HBX8 967 aa15.49■□□□□ 0.07
RNF13-208ENST00000467996 IL16Q14005 1332 aa15.48■□□□□ 0.07
RNF13-208ENST00000467996 SBF2Q86WG5 1849 aa15.48■□□□□ 0.07
RNF13-208ENST00000467996 RBM6P78332 1123 aaKnown RBP15.48■□□□□ 0.07
RNF13-208ENST00000467996 CALD1Q05682 793 aaKnown RBP15.48■□□□□ 0.07
RNF13-208ENST00000467996 NKX1-1Q15270 411 aaPredicted RBP15.48■□□□□ 0.07
RNF13-208ENST00000467996 DCAF5Q96JK2 942 aa15.48■□□□□ 0.07
RNF13-208ENST00000467996 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
RNF13-208ENST00000467996 SEPT12Q8IYM1 358 aa15.47■□□□□ 0.07
RNF13-208ENST00000467996 RGS12O14924 1447 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms