RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 KIF20BQ96Q89 1820 aa14.4□□□□□ -0.1
SSR3-205ENST00000467789 MAP3K19Q56UN5 1328 aa14.39□□□□□ -0.11
SSR3-205ENST00000467789 KIF24Q5T7B8 1368 aa14.38□□□□□ -0.11
SSR3-205ENST00000467789 HOXC9P31274 260 aa14.38□□□□□ -0.11
SSR3-205ENST00000467789 AMPHP49418 695 aa14.38□□□□□ -0.11
SSR3-205ENST00000467789 EIF4G2P78344 907 aaKnown RBP eCLIP14.38□□□□□ -0.11
SSR3-205ENST00000467789 NBPF14Q5TI25 921 aa14.38□□□□□ -0.11
SSR3-205ENST00000467789 NUP188Q5SRE5 1749 aa14.38□□□□□ -0.11
SSR3-205ENST00000467789 PSDA5PKW4 1024 aaPredicted RBP14.36□□□□□ -0.11
SSR3-205ENST00000467789 PROM2Q8N271 834 aa14.36□□□□□ -0.11
SSR3-205ENST00000467789 GGNBP2Q9H3C7 697 aa14.36□□□□□ -0.11
SSR3-205ENST00000467789 R3HDM1Q15032 1099 aaKnown RBP14.35□□□□□ -0.11
SSR3-205ENST00000467789 SMG6Q86US8 1419 aaKnown RBP14.34□□□□□ -0.11
SSR3-205ENST00000467789 NSD3Q9BZ95 1437 aa14.34□□□□□ -0.11
SSR3-205ENST00000467789 NHSQ6T4R5 1651 aa14.34□□□□□ -0.11
SSR3-205ENST00000467789 CARD14Q9BXL6 1004 aa14.33□□□□□ -0.12
SSR3-205ENST00000467789 CGNL1Q0VF96 1302 aa14.33□□□□□ -0.12
SSR3-205ENST00000467789 FLT4P35916 1363 aa14.33□□□□□ -0.12
SSR3-205ENST00000467789 LTV1Q96GA3 475 aaPredicted RBP14.32□□□□□ -0.12
SSR3-205ENST00000467789 INSRP06213 1382 aa14.32□□□□□ -0.12
SSR3-205ENST00000467789 HSPA5P11021 654 aaKnown RBP14.31□□□□□ -0.12
SSR3-205ENST00000467789 RRS1Q15050 365 aaKnown RBP14.31□□□□□ -0.12
SSR3-205ENST00000467789 RGPD2P0DJD1 1756 aa14.3□□□□□ -0.12
SSR3-205ENST00000467789 FBLN1P23142 703 aa14.3□□□□□ -0.12
SSR3-205ENST00000467789 ANKRD26Q9UPS8 1709 aa14.29□□□□□ -0.12
SSR3-205ENST00000467789 PTF1AQ7RTS3 328 aa14.29□□□□□ -0.12
SSR3-205ENST00000467789 KAT6BQ8WYB5 2073 aa14.29□□□□□ -0.12
SSR3-205ENST00000467789 BTAF1O14981 1849 aa14.27□□□□□ -0.12
SSR3-205ENST00000467789 MAP2P11137 1827 aaKnown RBP14.27□□□□□ -0.12
SSR3-205ENST00000467789 KCNQ2O43526 872 aa14.27□□□□□ -0.13
SSR3-205ENST00000467789 TXNRD1Q16881 649 aa14.27□□□□□ -0.13
SSR3-205ENST00000467789 HSP90AB2PQ58FF8 381 aa14.27□□□□□ -0.13
SSR3-205ENST00000467789 NBPF6Q5VWK0 638 aa14.27□□□□□ -0.13
SSR3-205ENST00000467789 ZCRB1Q8TBF4 217 aaKnown RBP14.27□□□□□ -0.13
SSR3-205ENST00000467789 RAPGEF4Q8WZA2 1011 aa14.27□□□□□ -0.13
SSR3-205ENST00000467789 NBPF4Q96M43 638 aa14.27□□□□□ -0.13
SSR3-205ENST00000467789 NSD2O96028 1365 aa14.26□□□□□ -0.13
SSR3-205ENST00000467789 DDX54Q8TDD1 881 aaKnown RBP14.26□□□□□ -0.13
SSR3-205ENST00000467789 ACSBG1Q96GR2 724 aa14.26□□□□□ -0.13
SSR3-205ENST00000467789 POLR3GLQ9BT43 218 aa14.26□□□□□ -0.13
SSR3-205ENST00000467789 MEGF6O75095 1541 aa14.25□□□□□ -0.13
SSR3-205ENST00000467789 WASHC2AQ641Q2 1341 aa14.25□□□□□ -0.13
SSR3-205ENST00000467789 SHANK3Q9BYB0 1731 aa14.25□□□□□ -0.13
SSR3-205ENST00000467789 TATP17735 454 aaPredicted RBP14.25□□□□□ -0.13
SSR3-205ENST00000467789 SPON1Q9HCB6 807 aa14.24□□□□□ -0.13
SSR3-205ENST00000467789 STK32BQ9NY57 414 aa14.24□□□□□ -0.13
SSR3-205ENST00000467789 EMILIN1Q9Y6C2 1016 aa14.24□□□□□ -0.13
SSR3-205ENST00000467789 NCAPD2Q15021 1401 aa14.24□□□□□ -0.13
SSR3-205ENST00000467789 REM2Q8IYK8 340 aaPredicted RBP14.23□□□□□ -0.13
SSR3-205ENST00000467789 PANK3Q9H999 370 aa14.23□□□□□ -0.13
SSR3-205ENST00000467789 FBXO3Q9UK99 471 aa14.23□□□□□ -0.13
SSR3-205ENST00000467789 DOT1LQ8TEK3 1739 aa14.23□□□□□ -0.13
SSR3-205ENST00000467789 PLEKHG2Q9H7P9 1386 aa14.22□□□□□ -0.13
SSR3-205ENST00000467789 CASZ1Q86V15 1759 aa14.22□□□□□ -0.13
SSR3-205ENST00000467789 PCDH11XQ9BZA7 1347 aa14.22□□□□□ -0.13
SSR3-205ENST00000467789 PCDH11YQ9BZA8 1340 aa14.22□□□□□ -0.13
SSR3-205ENST00000467789 HMGB2P26583 209 aaKnown RBP14.22□□□□□ -0.13
SSR3-205ENST00000467789 SLC15A2Q16348 729 aa14.22□□□□□ -0.13
SSR3-205ENST00000467789 SLC27A3Q5K4L6 730 aa14.22□□□□□ -0.13
SSR3-205ENST00000467789 ANO8Q9HCE9 1232 aaPredicted RBP14.22□□□□□ -0.13
SSR3-205ENST00000467789 PPM1GO15355 546 aaPredicted RBP14.21□□□□□ -0.13
SSR3-205ENST00000467789 USHBP1Q8N6Y0 703 aa14.21□□□□□ -0.13
SSR3-205ENST00000467789 SPDYE1Q8NFV5 336 aaPredicted RBP14.21□□□□□ -0.13
SSR3-205ENST00000467789 POLKQ9UBT6 870 aa14.21□□□□□ -0.13
SSR3-205ENST00000467789 PKD1L3Q7Z443 1732 aa14.21□□□□□ -0.14
SSR3-205ENST00000467789 PAPPAQ13219 1627 aa14.2□□□□□ -0.14
SSR3-205ENST00000467789 PRIM1P49642 420 aaKnown RBP14.19□□□□□ -0.14
SSR3-205ENST00000467789 SYTL4Q96C24 671 aaPredicted RBP14.19□□□□□ -0.14
SSR3-205ENST00000467789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.19□□□□□ -0.14
SSR3-205ENST00000467789 KNSTRNQ9Y448 316 aa14.19□□□□□ -0.14
SSR3-205ENST00000467789 LY75O60449 1722 aa14.18□□□□□ -0.14
SSR3-205ENST00000467789 PPP1R1BQ9UD71 204 aaPredicted RBP14.18□□□□□ -0.14
SSR3-205ENST00000467789 SPG7Q9UQ90 795 aa14.18□□□□□ -0.14
SSR3-205ENST00000467789 EYA1Q99502 592 aa14.17□□□□□ -0.14
SSR3-205ENST00000467789 QSER1Q2KHR3 1735 aa14.17□□□□□ -0.14
SSR3-205ENST00000467789 MORC1Q86VD1 984 aa14.16□□□□□ -0.14
SSR3-205ENST00000467789 LRRC4BQ9NT99 713 aa14.16□□□□□ -0.14
SSR3-205ENST00000467789 KIF7Q2M1P5 1343 aa14.15□□□□□ -0.14
SSR3-205ENST00000467789 CYP27B1O15528 508 aa14.15□□□□□ -0.14
SSR3-205ENST00000467789 TNNT2P45379 298 aaPredicted RBP14.15□□□□□ -0.14
SSR3-205ENST00000467789 EIF4A2Q14240 407 aaKnown RBP14.15□□□□□ -0.14
SSR3-205ENST00000467789 NKX1-1Q15270 411 aaPredicted RBP14.15□□□□□ -0.14
SSR3-205ENST00000467789 MTFR1LQ9H019 292 aa14.15□□□□□ -0.14
SSR3-205ENST00000467789 SLC16A10Q8TF71 515 aa14.14□□□□□ -0.15
SSR3-205ENST00000467789 IGSF1Q8N6C5 1336 aa14.14□□□□□ -0.15
SSR3-205ENST00000467789 ITGB4P16144 1822 aa14.13□□□□□ -0.15
SSR3-205ENST00000467789 ZBTB7AO95365 584 aa14.12□□□□□ -0.15
SSR3-205ENST00000467789 AMER1Q5JTC6 1135 aaPredicted RBP14.12□□□□□ -0.15
SSR3-205ENST00000467789 IFNL2Q8IZJ0 200 aa14.12□□□□□ -0.15
SSR3-205ENST00000467789 SMARCC1Q92922 1105 aaPredicted RBP14.12□□□□□ -0.15
SSR3-205ENST00000467789 PDGFDQ9GZP0 370 aaPredicted RBP14.12□□□□□ -0.15
SSR3-205ENST00000467789 CCNL1Q9UK58 526 aaPredicted RBP14.12□□□□□ -0.15
SSR3-205ENST00000467789 PTGER2P43116 358 aa14.11□□□□□ -0.15
SSR3-205ENST00000467789 ZNF827Q17R98 1081 aa14.11□□□□□ -0.15
SSR3-205ENST00000467789 TOGARAM1Q9Y4F4 1720 aa14.11□□□□□ -0.15
SSR3-205ENST00000467789 MPRIPQ6WCQ1 1025 aa14.1□□□□□ -0.15
SSR3-205ENST00000467789 TFCP2L1Q9NZI6 479 aa14.1□□□□□ -0.15
SSR3-205ENST00000467789 PALLDQ8WX93 1383 aa14.09□□□□□ -0.15
SSR3-205ENST00000467789 NPC1L1Q9UHC9 1359 aa14.09□□□□□ -0.15
SSR3-205ENST00000467789 PER1O15534 1290 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms