RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 TNS2Q63HR2 1409 aa21.72■■□□□ 1.07
HLA-C-205ENST00000466892 HMOX1P09601 288 aa21.71■■□□□ 1.07
HLA-C-205ENST00000466892 DDB1Q16531 1140 aa21.71■■□□□ 1.07
HLA-C-205ENST00000466892 SEPT12Q8IYM1 358 aa21.71■■□□□ 1.07
HLA-C-205ENST00000466892 PARP4Q9UKK3 1724 aaKnown RBP21.71■■□□□ 1.07
HLA-C-205ENST00000466892 EXOC5O00471 708 aa21.7■■□□□ 1.06
HLA-C-205ENST00000466892 NEFMP07197 916 aa21.7■■□□□ 1.06
HLA-C-205ENST00000466892 SPG7Q9UQ90 795 aa21.7■■□□□ 1.06
HLA-C-205ENST00000466892 PLEKHO1Q53GL0 409 aaPredicted RBP21.69■■□□□ 1.06
HLA-C-205ENST00000466892 ZCRB1Q8TBF4 217 aaKnown RBP21.69■■□□□ 1.06
HLA-C-205ENST00000466892 ADAMTS8Q9UP79 889 aa21.69■■□□□ 1.06
HLA-C-205ENST00000466892 WNK3Q9BYP7 1800 aa21.69■■□□□ 1.06
HLA-C-205ENST00000466892 PRKAR2BP31323 418 aa21.68■■□□□ 1.06
HLA-C-205ENST00000466892 PCDH11XQ9BZA7 1347 aa21.68■■□□□ 1.06
HLA-C-205ENST00000466892 PCDH11YQ9BZA8 1340 aa21.68■■□□□ 1.06
HLA-C-205ENST00000466892 RGS12O14924 1447 aa21.68■■□□□ 1.06
HLA-C-205ENST00000466892 RGPD2P0DJD1 1756 aa21.68■■□□□ 1.06
HLA-C-205ENST00000466892 A0A0G2JS52 829 aa21.67■■□□□ 1.06
HLA-C-205ENST00000466892 MYT1Q01538 1121 aa21.67■■□□□ 1.06
HLA-C-205ENST00000466892 PLEKHF1Q96S99 279 aa21.66■■□□□ 1.06
HLA-C-205ENST00000466892 LRRC37A3O60309 1634 aa21.66■■□□□ 1.06
HLA-C-205ENST00000466892 MAPK8IP3Q9UPT6 1336 aa21.65■■□□□ 1.06
HLA-C-205ENST00000466892 PDE3BQ13370 1112 aa21.65■■□□□ 1.06
HLA-C-205ENST00000466892 GAS2L2Q8NHY3 880 aa21.65■■□□□ 1.06
HLA-C-205ENST00000466892 PKD1L3Q7Z443 1732 aa21.64■■□□□ 1.06
HLA-C-205ENST00000466892 RUNDC1Q96C34 613 aa21.64■■□□□ 1.05
HLA-C-205ENST00000466892 BCL9O00512 1426 aa21.63■■□□□ 1.05
HLA-C-205ENST00000466892 KRT27Q7Z3Y8 459 aa21.62■■□□□ 1.05
HLA-C-205ENST00000466892 HSP90AB1P08238 724 aaKnown RBP21.61■■□□□ 1.05
HLA-C-205ENST00000466892 IFNL2Q8IZJ0 200 aa21.61■■□□□ 1.05
HLA-C-205ENST00000466892 NKX1-1Q15270 411 aaPredicted RBP21.6■■□□□ 1.05
HLA-C-205ENST00000466892 AKAP4Q5JQC9 854 aa21.6■■□□□ 1.05
HLA-C-205ENST00000466892 C1orf141Q5JVX7 400 aa21.6■■□□□ 1.05
HLA-C-205ENST00000466892 PHACTR3Q96KR7 559 aa21.6■■□□□ 1.05
HLA-C-205ENST00000466892 PHKG2P15735 406 aa21.59■■□□□ 1.05
HLA-C-205ENST00000466892 MTHFSDQ2M296 383 aaKnown RBP21.59■■□□□ 1.05
HLA-C-205ENST00000466892 NCBP3Q53F19 620 aaKnown RBP21.59■■□□□ 1.05
HLA-C-205ENST00000466892 ZNF530Q6P9A1 599 aaPredicted RBP21.59■■□□□ 1.05
HLA-C-205ENST00000466892 CYP27B1O15528 508 aa21.58■■□□□ 1.05
HLA-C-205ENST00000466892 FAM9BQ8IZU0 186 aa21.58■■□□□ 1.05
HLA-C-205ENST00000466892 MARCH10Q8NA82 808 aaPredicted RBP21.58■■□□□ 1.05
HLA-C-205ENST00000466892 HTATSF1O43719 755 aaKnown RBP21.57■■□□□ 1.04
HLA-C-205ENST00000466892 NGEFQ8N5V2 710 aa21.57■■□□□ 1.04
HLA-C-205ENST00000466892 DDX54Q8TDD1 881 aaKnown RBP21.57■■□□□ 1.04
HLA-C-205ENST00000466892 NFE2L2Q16236 605 aa21.56■■□□□ 1.04
HLA-C-205ENST00000466892 FAM196AQ6ZSG2 479 aa21.56■■□□□ 1.04
HLA-C-205ENST00000466892 DCAF5Q96JK2 942 aa21.56■■□□□ 1.04
HLA-C-205ENST00000466892 GNAT3A8MTJ3 354 aa21.55■■□□□ 1.04
HLA-C-205ENST00000466892 LMOD3Q0VAK6 560 aa21.55■■□□□ 1.04
HLA-C-205ENST00000466892 MAP3K5Q99683 1374 aa21.55■■□□□ 1.04
HLA-C-205ENST00000466892 CCDC146Q8IYE0 955 aa21.54■■□□□ 1.04
HLA-C-205ENST00000466892 SHANK3Q9BYB0 1731 aa21.53■■□□□ 1.04
HLA-C-205ENST00000466892 TMPOP42166 694 aaKnown RBP21.52■■□□□ 1.04
HLA-C-205ENST00000466892 ERVV-2B6SEH9 535 aa21.5■■□□□ 1.03
HLA-C-205ENST00000466892 RTF1Q92541 710 aaKnown RBP21.5■■□□□ 1.03
HLA-C-205ENST00000466892 APAF1O14727 1248 aa21.49■■□□□ 1.03
HLA-C-205ENST00000466892 RIPK4P57078 832 aa21.49■■□□□ 1.03
HLA-C-205ENST00000466892 CCDC27Q2M243 656 aa21.49■■□□□ 1.03
HLA-C-205ENST00000466892 CEMIPQ8WUJ3 1361 aa21.48■■□□□ 1.03
HLA-C-205ENST00000466892 KDM6AO15550 1401 aaPredicted RBP21.47■■□□□ 1.03
HLA-C-205ENST00000466892 ADAMTS7Q9UKP4 1686 aa21.47■■□□□ 1.03
HLA-C-205ENST00000466892 BRWD3Q6RI45 1802 aa21.47■■□□□ 1.03
HLA-C-205ENST00000466892 RNMTO43148 476 aaKnown RBP21.46■■□□□ 1.03
HLA-C-205ENST00000466892 MRC1P22897 1456 aa21.45■■□□□ 1.03
HLA-C-205ENST00000466892 MPRIPQ6WCQ1 1025 aa21.45■■□□□ 1.02
HLA-C-205ENST00000466892 CALD1Q05682 793 aaKnown RBP21.44■■□□□ 1.02
HLA-C-205ENST00000466892 BCL11BQ9C0K0 894 aaPredicted RBP21.44■■□□□ 1.02
HLA-C-205ENST00000466892 CCDC125Q86Z20 511 aa21.43■■□□□ 1.02
HLA-C-205ENST00000466892 IL17REQ8NFR9 667 aa21.43■■□□□ 1.02
HLA-C-205ENST00000466892 SLC52A2Q9HAB3 445 aa21.43■■□□□ 1.02
HLA-C-205ENST00000466892 CABP4P57796 275 aa21.42■■□□□ 1.02
HLA-C-205ENST00000466892 FAM182BQ5T319 152 aa21.42■■□□□ 1.02
HLA-C-205ENST00000466892 TRIM35Q9UPQ4 493 aa21.42■■□□□ 1.02
HLA-C-205ENST00000466892 RRP7AQ9Y3A4 280 aaKnown RBP21.42■■□□□ 1.02
HLA-C-205ENST00000466892 TEFQ10587 303 aa21.41■■□□□ 1.02
HLA-C-205ENST00000466892 NEUROD2Q15784 382 aa21.41■■□□□ 1.02
HLA-C-205ENST00000466892 LGR6Q9HBX8 967 aa21.41■■□□□ 1.02
HLA-C-205ENST00000466892 BABAM1Q9NWV8 329 aa21.41■■□□□ 1.02
HLA-C-205ENST00000466892 TMOD3Q9NYL9 352 aa21.41■■□□□ 1.02
HLA-C-205ENST00000466892 NHSQ6T4R5 1651 aa21.4■■□□□ 1.02
HLA-C-205ENST00000466892 PRIM1P49642 420 aaKnown RBP21.4■■□□□ 1.02
HLA-C-205ENST00000466892 MCM10Q7L590 875 aa21.4■■□□□ 1.02
HLA-C-205ENST00000466892 WWC1Q8IX03 1113 aa21.38■■□□□ 1.01
HLA-C-205ENST00000466892 SYTL4Q96C24 671 aaPredicted RBP21.38■■□□□ 1.01
HLA-C-205ENST00000466892 ACSBG1Q96GR2 724 aa21.38■■□□□ 1.01
HLA-C-205ENST00000466892 DOT1LQ8TEK3 1739 aa21.38■■□□□ 1.01
HLA-C-205ENST00000466892 TOGARAM1Q9Y4F4 1720 aa21.38■■□□□ 1.01
HLA-C-205ENST00000466892 NFATC2IPQ8NCF5 419 aa21.37■■□□□ 1.01
HLA-C-205ENST00000466892 SCN11AQ9UI33 1791 aa21.37■■□□□ 1.01
HLA-C-205ENST00000466892 IL16Q14005 1332 aa21.36■■□□□ 1.01
HLA-C-205ENST00000466892 KCNQ2O43526 872 aa21.36■■□□□ 1.01
HLA-C-205ENST00000466892 TRIM37O94972 964 aa21.36■■□□□ 1.01
HLA-C-205ENST00000466892 TAF7Q15545 349 aaPredicted RBP21.36■■□□□ 1.01
HLA-C-205ENST00000466892 ILDR2Q71H61 639 aa21.36■■□□□ 1.01
HLA-C-205ENST00000466892 WDR63Q8IWG1 891 aa21.36■■□□□ 1.01
HLA-C-205ENST00000466892 PIGBQ92521 554 aa21.36■■□□□ 1.01
HLA-C-205ENST00000466892 SMARCC1Q92922 1105 aaPredicted RBP21.36■■□□□ 1.01
HLA-C-205ENST00000466892 DCTN1Q14203 1278 aa21.35■■□□□ 1.01
HLA-C-205ENST00000466892 ZNF521Q96K83 1311 aa21.34■■□□□ 1.01
HLA-C-205ENST00000466892 HMGB2P26583 209 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms