RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 RGPD4Q7Z3J3 1758 aa21.83■■□□□ 1.09
CRAMP1-204ENST00000466562 TATP17735 454 aaPredicted RBP21.81■■□□□ 1.08
CRAMP1-204ENST00000466562 TXNRD1Q16881 649 aa21.81■■□□□ 1.08
CRAMP1-204ENST00000466562 NSD2O96028 1365 aa21.81■■□□□ 1.08
CRAMP1-204ENST00000466562 NHSQ6T4R5 1651 aa21.81■■□□□ 1.08
CRAMP1-204ENST00000466562 ANO8Q9HCE9 1232 aaPredicted RBP21.79■■□□□ 1.08
CRAMP1-204ENST00000466562 KNSTRNQ9Y448 316 aa21.79■■□□□ 1.08
CRAMP1-204ENST00000466562 ANKRD26Q9UPS8 1709 aa21.79■■□□□ 1.08
CRAMP1-204ENST00000466562 MORC1Q86VD1 984 aa21.77■■□□□ 1.08
CRAMP1-204ENST00000466562 EYA1Q99502 592 aa21.77■■□□□ 1.08
CRAMP1-204ENST00000466562 MAP2P11137 1827 aaKnown RBP21.77■■□□□ 1.08
CRAMP1-204ENST00000466562 LRP5O75197 1615 aa21.77■■□□□ 1.07
CRAMP1-204ENST00000466562 PRIM1P49642 420 aaKnown RBP21.76■■□□□ 1.07
CRAMP1-204ENST00000466562 NCAPD2Q15021 1401 aa21.76■■□□□ 1.07
CRAMP1-204ENST00000466562 SHANK3Q9BYB0 1731 aa21.75■■□□□ 1.07
CRAMP1-204ENST00000466562 EIF4A2Q14240 407 aaKnown RBP21.75■■□□□ 1.07
CRAMP1-204ENST00000466562 AMER1Q5JTC6 1135 aaPredicted RBP21.75■■□□□ 1.07
CRAMP1-204ENST00000466562 SYTL4Q96C24 671 aaPredicted RBP21.75■■□□□ 1.07
CRAMP1-204ENST00000466562 PCDH11XQ9BZA7 1347 aa21.73■■□□□ 1.07
CRAMP1-204ENST00000466562 PCDH11YQ9BZA8 1340 aa21.73■■□□□ 1.07
CRAMP1-204ENST00000466562 BTAF1O14981 1849 aa21.72■■□□□ 1.07
CRAMP1-204ENST00000466562 PER1O15534 1290 aaPredicted RBP21.72■■□□□ 1.07
CRAMP1-204ENST00000466562 CYP27B1O15528 508 aa21.71■■□□□ 1.07
CRAMP1-204ENST00000466562 STK32BQ9NY57 414 aa21.71■■□□□ 1.07
CRAMP1-204ENST00000466562 SLC15A2Q16348 729 aa21.7■■□□□ 1.06
CRAMP1-204ENST00000466562 LRRC4BQ9NT99 713 aa21.69■■□□□ 1.06
CRAMP1-204ENST00000466562 DOT1LQ8TEK3 1739 aa21.69■■□□□ 1.06
CRAMP1-204ENST00000466562 PDGFDQ9GZP0 370 aaPredicted RBP21.68■■□□□ 1.06
CRAMP1-204ENST00000466562 SPG7Q9UQ90 795 aa21.68■■□□□ 1.06
CRAMP1-204ENST00000466562 KAT6BQ8WYB5 2073 aa21.67■■□□□ 1.06
CRAMP1-204ENST00000466562 IGSF1Q8N6C5 1336 aa21.67■■□□□ 1.06
CRAMP1-204ENST00000466562 SLC27A3Q5K4L6 730 aa21.67■■□□□ 1.06
CRAMP1-204ENST00000466562 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.67■■□□□ 1.06
CRAMP1-204ENST00000466562 SPON1Q9HCB6 807 aa21.66■■□□□ 1.06
CRAMP1-204ENST00000466562 NKX1-1Q15270 411 aaPredicted RBP21.65■■□□□ 1.06
CRAMP1-204ENST00000466562 PKD1L3Q7Z443 1732 aa21.64■■□□□ 1.06
CRAMP1-204ENST00000466562 PAPPAQ13219 1627 aa21.63■■□□□ 1.05
CRAMP1-204ENST00000466562 ZNF827Q17R98 1081 aa21.63■■□□□ 1.05
CRAMP1-204ENST00000466562 CC2D1BQ5T0F9 858 aaKnown RBP21.63■■□□□ 1.05
CRAMP1-204ENST00000466562 KCNQ4P56696 695 aa21.62■■□□□ 1.05
CRAMP1-204ENST00000466562 MPRIPQ6WCQ1 1025 aa21.62■■□□□ 1.05
CRAMP1-204ENST00000466562 CASZ1Q86V15 1759 aa21.61■■□□□ 1.05
CRAMP1-204ENST00000466562 PHKG2P15735 406 aa21.61■■□□□ 1.05
CRAMP1-204ENST00000466562 IL13P35225 146 aa21.61■■□□□ 1.05
CRAMP1-204ENST00000466562 IFNL2Q8IZJ0 200 aa21.61■■□□□ 1.05
CRAMP1-204ENST00000466562 AKT1S1Q96B36 256 aa21.61■■□□□ 1.05
CRAMP1-204ENST00000466562 PLEKHG2Q9H7P9 1386 aa21.61■■□□□ 1.05
CRAMP1-204ENST00000466562 ZBTB7AO95365 584 aa21.6■■□□□ 1.05
CRAMP1-204ENST00000466562 MTHFSP49914 203 aa21.6■■□□□ 1.05
CRAMP1-204ENST00000466562 CCNL1Q9UK58 526 aaPredicted RBP21.6■■□□□ 1.05
CRAMP1-204ENST00000466562 NPC1L1Q9UHC9 1359 aa21.59■■□□□ 1.05
CRAMP1-204ENST00000466562 AEBP1Q8IUX7 1158 aa21.58■■□□□ 1.05
CRAMP1-204ENST00000466562 PIGBQ92521 554 aa21.58■■□□□ 1.05
CRAMP1-204ENST00000466562 SULT6B1Q6IMI4 303 aa21.57■■□□□ 1.04
CRAMP1-204ENST00000466562 LY75O60449 1722 aa21.57■■□□□ 1.04
CRAMP1-204ENST00000466562 TOGARAM1Q9Y4F4 1720 aa21.57■■□□□ 1.04
CRAMP1-204ENST00000466562 CNGB1Q14028 1251 aaPredicted RBP21.56■■□□□ 1.04
CRAMP1-204ENST00000466562 PLEKHO1Q53GL0 409 aaPredicted RBP21.56■■□□□ 1.04
CRAMP1-204ENST00000466562 PPP1R1BQ9UD71 204 aaPredicted RBP21.56■■□□□ 1.04
CRAMP1-204ENST00000466562 ATF5Q9Y2D1 282 aaPredicted RBP21.56■■□□□ 1.04
CRAMP1-204ENST00000466562 PALLDQ8WX93 1383 aa21.56■■□□□ 1.04
CRAMP1-204ENST00000466562 AMOTQ4VCS5 1084 aa21.55■■□□□ 1.04
CRAMP1-204ENST00000466562 MTFR1LQ9H019 292 aa21.55■■□□□ 1.04
CRAMP1-204ENST00000466562 KDRP35968 1356 aa21.54■■□□□ 1.04
CRAMP1-204ENST00000466562 PTGER2P43116 358 aa21.54■■□□□ 1.04
CRAMP1-204ENST00000466562 SMARCC1Q92922 1105 aaPredicted RBP21.54■■□□□ 1.04
CRAMP1-204ENST00000466562 TMOD3Q9NYL9 352 aa21.53■■□□□ 1.04
CRAMP1-204ENST00000466562 TFCP2L1Q9NZI6 479 aa21.53■■□□□ 1.04
CRAMP1-204ENST00000466562 ZNF530Q6P9A1 599 aaPredicted RBP21.52■■□□□ 1.04
CRAMP1-204ENST00000466562 PNPLA7Q6ZV29 1317 aa21.52■■□□□ 1.03
CRAMP1-204ENST00000466562 HSP90AB1P08238 724 aaKnown RBP21.51■■□□□ 1.03
CRAMP1-204ENST00000466562 DCAF5Q96JK2 942 aa21.51■■□□□ 1.03
CRAMP1-204ENST00000466562 ITGB4P16144 1822 aa21.5■■□□□ 1.03
CRAMP1-204ENST00000466562 DIAPH1O60610 1272 aaKnown RBP21.5■■□□□ 1.03
CRAMP1-204ENST00000466562 SGIP1Q9BQI5 828 aa21.5■■□□□ 1.03
CRAMP1-204ENST00000466562 ERVV-2B6SEH9 535 aa21.49■■□□□ 1.03
CRAMP1-204ENST00000466562 ASAP1Q9ULH1 1129 aa21.49■■□□□ 1.03
CRAMP1-204ENST00000466562 HMGB2P26583 209 aaKnown RBP21.48■■□□□ 1.03
CRAMP1-204ENST00000466562 SLC16A10Q8TF71 515 aa21.48■■□□□ 1.03
CRAMP1-204ENST00000466562 HMOX1P09601 288 aa21.47■■□□□ 1.03
CRAMP1-204ENST00000466562 C1orf141Q5JVX7 400 aa21.47■■□□□ 1.03
CRAMP1-204ENST00000466562 ATG3Q9NT62 314 aa21.47■■□□□ 1.03
CRAMP1-204ENST00000466562 KDM6AO15550 1401 aaPredicted RBP21.46■■□□□ 1.03
CRAMP1-204ENST00000466562 LOC102724428A0A0B4J2F2 783 aa21.46■■□□□ 1.03
CRAMP1-204ENST00000466562 SIK1P57059 783 aa21.46■■□□□ 1.03
CRAMP1-204ENST00000466562 QSER1Q2KHR3 1735 aa21.46■■□□□ 1.03
CRAMP1-204ENST00000466562 COL23A1Q86Y22 540 aaPredicted RBP21.45■■□□□ 1.02
CRAMP1-204ENST00000466562 COL3A1P02461 1466 aaPredicted RBP21.44■■□□□ 1.02
CRAMP1-204ENST00000466562 CABP4P57796 275 aa21.43■■□□□ 1.02
CRAMP1-204ENST00000466562 ARXQ96QS3 562 aa21.43■■□□□ 1.02
CRAMP1-204ENST00000466562 C5P01031 1676 aa21.43■■□□□ 1.02
CRAMP1-204ENST00000466562 AKAP4Q5JQC9 854 aa21.42■■□□□ 1.02
CRAMP1-204ENST00000466562 TUBGCP6Q96RT7 1819 aa21.42■■□□□ 1.02
CRAMP1-204ENST00000466562 MSH5O43196 834 aa21.41■■□□□ 1.02
CRAMP1-204ENST00000466562 ATP6V1AP38606 617 aa21.41■■□□□ 1.02
CRAMP1-204ENST00000466562 ITPK1Q13572 414 aa21.41■■□□□ 1.02
CRAMP1-204ENST00000466562 LINC00116Q8NCU8 138 aa21.41■■□□□ 1.02
CRAMP1-204ENST00000466562 AK7Q96M32 723 aa21.41■■□□□ 1.02
CRAMP1-204ENST00000466562 FHDC1Q9C0D6 1143 aaPredicted RBP21.41■■□□□ 1.02
CRAMP1-204ENST00000466562 U2SURPO15042 1029 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 244.2 ms