RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CARNS1A5YM72 827 aa7.78□□□□□ -1.16
CDC42BPA-211ENST00000466538 ERVH48-1M5A8F1 160 aa7.78□□□□□ -1.16
CDC42BPA-211ENST00000466538 WNT7AO00755 349 aa7.78□□□□□ -1.16
CDC42BPA-211ENST00000466538 DKK1O94907 266 aa7.78□□□□□ -1.16
CDC42BPA-211ENST00000466538 GRM5P41594 1212 aa7.78□□□□□ -1.16
CDC42BPA-211ENST00000466538 SEC13P55735 322 aa7.78□□□□□ -1.16
CDC42BPA-211ENST00000466538 FAM69CQ0P6D2 419 aa7.78□□□□□ -1.16
CDC42BPA-211ENST00000466538 NR5A1Q13285 461 aa7.78□□□□□ -1.16
CDC42BPA-211ENST00000466538 CCDC102BQ68D86 513 aa7.78□□□□□ -1.16
CDC42BPA-211ENST00000466538 ARID5BQ14865 1188 aa7.77□□□□□ -1.17
CDC42BPA-211ENST00000466538 ZNF594Q96JF6 807 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-211ENST00000466538 GZF1Q9H116 711 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-211ENST00000466538 SSFA2P28290 1259 aa7.76□□□□□ -1.17
CDC42BPA-211ENST00000466538 ERVK-9P63128 1117 aa7.76□□□□□ -1.17
CDC42BPA-211ENST00000466538 GNEQ9Y223 722 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-211ENST00000466538 M0R2N6 131 aa7.75□□□□□ -1.17
CDC42BPA-211ENST00000466538 ADH1CP00326 375 aa7.75□□□□□ -1.17
CDC42BPA-211ENST00000466538 ARID4AP29374 1257 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPA-211ENST00000466538 RAB15P59190 212 aa7.75□□□□□ -1.17
CDC42BPA-211ENST00000466538 PSME1Q06323 249 aa7.75□□□□□ -1.17
CDC42BPA-211ENST00000466538 SPRYD7Q5W111 196 aa7.75□□□□□ -1.17
CDC42BPA-211ENST00000466538 CC2D2BQ6DHV5 1058 aa7.75□□□□□ -1.17
CDC42BPA-211ENST00000466538 TPCN2Q8NHX9 752 aa7.75□□□□□ -1.17
CDC42BPA-211ENST00000466538 CCER1Q8TC90 406 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPA-211ENST00000466538 EMID1Q96A84 441 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPA-211ENST00000466538 KIAA1024Q9UPX6 916 aa7.75□□□□□ -1.17
CDC42BPA-211ENST00000466538 CCDC116Q8IYX3 515 aa7.74□□□□□ -1.17
CDC42BPA-211ENST00000466538 ZNF598Q86UK7 904 aaKnown RBP7.73□□□□□ -1.17
CDC42BPA-211ENST00000466538 C1orf216Q8TAB5 229 aa7.73□□□□□ -1.17
CDC42BPA-211ENST00000466538 MRGPRX2Q96LB1 330 aa7.73□□□□□ -1.17
CDC42BPA-211ENST00000466538 ATP2B4P23634 1241 aa7.72□□□□□ -1.17
CDC42BPA-211ENST00000466538 FSHRP23945 695 aa7.72□□□□□ -1.17
CDC42BPA-211ENST00000466538 MYT1Q01538 1121 aa7.72□□□□□ -1.17
CDC42BPA-211ENST00000466538 TMCO4Q5TGY1 634 aa7.72□□□□□ -1.17
CDC42BPA-211ENST00000466538 PHLDB3Q6NSJ2 640 aa7.72□□□□□ -1.17
CDC42BPA-211ENST00000466538 TXNDC2Q86VQ3 553 aa7.72□□□□□ -1.17
CDC42BPA-211ENST00000466538 EMILIN1Q9Y6C2 1016 aa7.72□□□□□ -1.17
CDC42BPA-211ENST00000466538 IVNS1ABPQ9Y6Y0 642 aa7.72□□□□□ -1.17
CDC42BPA-211ENST00000466538 V9GY48 417 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-211ENST00000466538 SFI1A8K8P3 1242 aa7.71□□□□□ -1.18
CDC42BPA-211ENST00000466538 WASLO00401 505 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-211ENST00000466538 SCTRP47872 440 aa7.71□□□□□ -1.18
CDC42BPA-211ENST00000466538 PPP1R26Q5T8A7 1209 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-211ENST00000466538 OSBPL3Q9H4L5 887 aa7.71□□□□□ -1.18
CDC42BPA-211ENST00000466538 PGPEP1Q9NXJ5 209 aa7.71□□□□□ -1.18
CDC42BPA-211ENST00000466538 SLAIN2Q9P270 581 aa7.71□□□□□ -1.18
CDC42BPA-211ENST00000466538 MTMR7Q9Y216 660 aa7.71□□□□□ -1.18
CDC42BPA-211ENST00000466538 TLL2Q9Y6L7 1015 aa7.71□□□□□ -1.18
CDC42BPA-211ENST00000466538 A0A0G2JS52 829 aa7.7□□□□□ -1.18
CDC42BPA-211ENST00000466538 BACH1O14867 736 aa7.7□□□□□ -1.18
CDC42BPA-211ENST00000466538 GNRH1P01148 92 aa7.7□□□□□ -1.18
CDC42BPA-211ENST00000466538 ZNF697Q5TEC3 545 aa7.7□□□□□ -1.18
CDC42BPA-211ENST00000466538 HINFPQ9BQA5 517 aa7.7□□□□□ -1.18
CDC42BPA-211ENST00000466538 TMPRSS4Q9NRS4 437 aa7.7□□□□□ -1.18
CDC42BPA-211ENST00000466538 PLA2G2EQ9NZK7 142 aa7.7□□□□□ -1.18
CDC42BPA-211ENST00000466538 LILRA1O75019 489 aa7.69□□□□□ -1.18
CDC42BPA-211ENST00000466538 TAS1R3Q7RTX0 852 aa7.69□□□□□ -1.18
CDC42BPA-211ENST00000466538 CYP2U1Q7Z449 544 aa7.69□□□□□ -1.18
CDC42BPA-211ENST00000466538 ZNF784Q8NCA9 323 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-211ENST00000466538 OCLNQ16625 522 aa7.68□□□□□ -1.18
CDC42BPA-211ENST00000466538 ESCO1Q5FWF5 840 aa7.68□□□□□ -1.18
CDC42BPA-211ENST00000466538 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.68□□□□□ -1.18
CDC42BPA-211ENST00000466538 SNIP1Q8TAD8 396 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-211ENST00000466538 CYLDQ9NQC7 956 aa7.68□□□□□ -1.18
CDC42BPA-211ENST00000466538 TMEM229AB2RXF0 380 aa7.67□□□□□ -1.18
CDC42BPA-211ENST00000466538 ALDH1A1P00352 501 aa7.67□□□□□ -1.18
CDC42BPA-211ENST00000466538 INHAP05111 366 aa7.67□□□□□ -1.18
CDC42BPA-211ENST00000466538 WEE1P30291 646 aa7.67□□□□□ -1.18
CDC42BPA-211ENST00000466538 GDF10P55107 478 aa7.67□□□□□ -1.18
CDC42BPA-211ENST00000466538 SND1Q7KZF4 910 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDC42BPA-211ENST00000466538 GAS2L2Q8NHY3 880 aa7.67□□□□□ -1.18
CDC42BPA-211ENST00000466538 SLC4A9Q96Q91 983 aa7.67□□□□□ -1.18
CDC42BPA-211ENST00000466538 PRKD2Q9BZL6 878 aa7.67□□□□□ -1.18
CDC42BPA-211ENST00000466538 ZNF358Q9NW07 568 aa7.67□□□□□ -1.18
CDC42BPA-211ENST00000466538 PKD2L1Q9P0L9 805 aa7.67□□□□□ -1.18
CDC42BPA-211ENST00000466538 CXXC1Q9P0U4 656 aaPredicted RBP7.67□□□□□ -1.18
CDC42BPA-211ENST00000466538 WASF2Q9Y6W5 498 aa7.67□□□□□ -1.18
CDC42BPA-211ENST00000466538 PRMT3O60678 531 aa7.66□□□□□ -1.18
CDC42BPA-211ENST00000466538 NR3C2P08235 984 aa7.66□□□□□ -1.18
CDC42BPA-211ENST00000466538 ADD1P35611 737 aaKnown RBP7.66□□□□□ -1.18
CDC42BPA-211ENST00000466538 SCNN1DP51172 638 aa7.66□□□□□ -1.18
CDC42BPA-211ENST00000466538 MFAP1P55081 439 aaKnown RBP7.65□□□□□ -1.18
CDC42BPA-211ENST00000466538 FOXC1Q12948 553 aa7.65□□□□□ -1.18
CDC42BPA-211ENST00000466538 TSEN2Q8NCE0 465 aaKnown RBP7.65□□□□□ -1.18
CDC42BPA-211ENST00000466538 PRIMPOLQ96LW4 560 aa7.65□□□□□ -1.18
CDC42BPA-211ENST00000466538 GDF9O60383 454 aa7.64□□□□□ -1.19
CDC42BPA-211ENST00000466538 PTCD1O75127 700 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-211ENST00000466538 IGFBP4P22692 258 aa7.64□□□□□ -1.19
CDC42BPA-211ENST00000466538 NNTQ13423 1086 aa7.64□□□□□ -1.19
CDC42BPA-211ENST00000466538 COL26A1Q96A83 441 aa7.64□□□□□ -1.19
CDC42BPA-211ENST00000466538 XAGE2Q96GT9 111 aa7.64□□□□□ -1.19
CDC42BPA-211ENST00000466538 ETNK1Q9HBU6 452 aa7.64□□□□□ -1.19
CDC42BPA-211ENST00000466538 CCDC27Q2M243 656 aa7.63□□□□□ -1.19
CDC42BPA-211ENST00000466538 CYP4X1Q8N118 509 aa7.63□□□□□ -1.19
CDC42BPA-211ENST00000466538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.63□□□□□ -1.19
CDC42BPA-211ENST00000466538 EGFL7Q9UHF1 273 aa7.63□□□□□ -1.19
CDC42BPA-211ENST00000466538 ATAD2Q6PL18 1390 aa7.62□□□□□ -1.19
CDC42BPA-211ENST00000466538 TTC24A2A3L6 582 aaPredicted RBP7.62□□□□□ -1.19
CDC42BPA-211ENST00000466538 FOXO3O43524 673 aa7.62□□□□□ -1.19
CDC42BPA-211ENST00000466538 ADH1AP07327 375 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms