RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 TRIM44Q96DX7 344 aaPredicted RBP11.45□□□□□ -0.58
SCAF11-205ENST00000465950 HYPKQ9NX55 129 aa11.45□□□□□ -0.58
SCAF11-205ENST00000465950 TRMT112Q9UI30 125 aaKnown RBP11.45□□□□□ -0.58
SCAF11-205ENST00000465950 BAG3O95817 575 aa11.44□□□□□ -0.58
SCAF11-205ENST00000465950 GRM1Q13255 1194 aa11.44□□□□□ -0.58
SCAF11-205ENST00000465950 BRDTQ58F21 947 aaPredicted RBP11.44□□□□□ -0.58
SCAF11-205ENST00000465950 GRIPAP1Q4V328 841 aa11.44□□□□□ -0.58
SCAF11-205ENST00000465950 PPP4R3AQ6IN85 833 aa11.44□□□□□ -0.58
SCAF11-205ENST00000465950 WAPLQ7Z5K2 1190 aa11.44□□□□□ -0.58
SCAF11-205ENST00000465950 SLC5A4Q9NY91 659 aa11.44□□□□□ -0.58
SCAF11-205ENST00000465950 CT47B1P0C2W7 299 aaPredicted RBP11.44□□□□□ -0.58
SCAF11-205ENST00000465950 HSCBQ8IWL3 235 aa11.44□□□□□ -0.58
SCAF11-205ENST00000465950 ANKRD18BA2A2Z9 1011 aa11.44□□□□□ -0.58
SCAF11-205ENST00000465950 H7C1D1 291 aa11.44□□□□□ -0.58
SCAF11-205ENST00000465950 PTCD1O75127 700 aaKnown RBP11.44□□□□□ -0.58
SCAF11-205ENST00000465950 TMEM2Q9UHN6 1383 aa11.44□□□□□ -0.58
SCAF11-205ENST00000465950 MAGI3Q5TCQ9 1506 aa11.43□□□□□ -0.58
SCAF11-205ENST00000465950 ABCA8O94911 1581 aa11.43□□□□□ -0.58
SCAF11-205ENST00000465950 CNKSR1Q969H4 720 aa11.43□□□□□ -0.58
SCAF11-205ENST00000465950 ZC3H12CQ9C0D7 883 aaKnown RBP11.43□□□□□ -0.58
SCAF11-205ENST00000465950 ACEP12821 1306 aa11.43□□□□□ -0.58
SCAF11-205ENST00000465950 SNRPA1P09661 255 aaKnown RBP11.43□□□□□ -0.58
SCAF11-205ENST00000465950 SRCIN1Q9C0H9 1055 aa11.43□□□□□ -0.58
SCAF11-205ENST00000465950 HOOK1Q9UJC3 728 aaKnown RBP11.43□□□□□ -0.58
SCAF11-205ENST00000465950 TIAM1Q13009 1591 aa11.43□□□□□ -0.58
SCAF11-205ENST00000465950 DZIP1Q86YF9 867 aaKnown RBP11.43□□□□□ -0.58
SCAF11-205ENST00000465950 ANKRD2Q9GZV1 360 aa11.43□□□□□ -0.58
SCAF11-205ENST00000465950 MAST3O60307 1309 aa11.42□□□□□ -0.58
SCAF11-205ENST00000465950 TAF7Q15545 349 aaPredicted RBP11.42□□□□□ -0.58
SCAF11-205ENST00000465950 PRKAR2BP31323 418 aa11.42□□□□□ -0.58
SCAF11-205ENST00000465950 FEZ1Q99689 392 aa11.42□□□□□ -0.58
SCAF11-205ENST00000465950 ZNF804AQ7Z570 1209 aa11.42□□□□□ -0.58
SCAF11-205ENST00000465950 NKTRP30414 1462 aaKnown RBP11.42□□□□□ -0.58
SCAF11-205ENST00000465950 PIK3C2GO75747 1445 aa11.42□□□□□ -0.58
SCAF11-205ENST00000465950 WDR78Q5VTH9 848 aa11.42□□□□□ -0.58
SCAF11-205ENST00000465950 NIM1KQ8IY84 436 aa11.42□□□□□ -0.58
SCAF11-205ENST00000465950 FAM98CQ17RN3 349 aaKnown RBP11.41□□□□□ -0.58
SCAF11-205ENST00000465950 GLRX3O76003 335 aaKnown RBP11.41□□□□□ -0.58
SCAF11-205ENST00000465950 FYB1O15117 783 aa11.41□□□□□ -0.58
SCAF11-205ENST00000465950 CHRNA2Q15822 529 aa11.41□□□□□ -0.58
SCAF11-205ENST00000465950 CC2D2BQ6DHV5 1058 aa11.41□□□□□ -0.58
SCAF11-205ENST00000465950 FAM184AQ8NB25 1140 aa11.41□□□□□ -0.58
SCAF11-205ENST00000465950 TMEM94Q12767 1356 aa11.41□□□□□ -0.58
SCAF11-205ENST00000465950 PARP10Q53GL7 1025 aa11.41□□□□□ -0.58
SCAF11-205ENST00000465950 UNC5CLQ8IV45 518 aa11.41□□□□□ -0.58
SCAF11-205ENST00000465950 RAI14Q9P0K7 980 aa11.41□□□□□ -0.58
SCAF11-205ENST00000465950 PABPC4Q13310 644 aaKnown RBP eCLIP11.4□□□□□ -0.58
SCAF11-205ENST00000465950 IFIT5Q13325 482 aaKnown RBP11.4□□□□□ -0.58
SCAF11-205ENST00000465950 NOS1P29475 1434 aa11.4□□□□□ -0.58
SCAF11-205ENST00000465950 RFX1P22670 979 aa11.4□□□□□ -0.58
SCAF11-205ENST00000465950 SH2D4AQ9H788 454 aa11.4□□□□□ -0.58
SCAF11-205ENST00000465950 PLCG2P16885 1265 aa11.4□□□□□ -0.58
SCAF11-205ENST00000465950 ATP2B2Q01814 1243 aa11.4□□□□□ -0.58
SCAF11-205ENST00000465950 CCDC178Q5BJE1 867 aa11.4□□□□□ -0.58
SCAF11-205ENST00000465950 CERS3Q8IU89 383 aa11.4□□□□□ -0.58
SCAF11-205ENST00000465950 PBRM1Q86U86 1689 aa11.4□□□□□ -0.58
SCAF11-205ENST00000465950 NPATQ14207 1427 aa11.4□□□□□ -0.58
SCAF11-205ENST00000465950 TNPO1Q92973 898 aaKnown RBP11.4□□□□□ -0.59
SCAF11-205ENST00000465950 TCERG1O14776 1098 aaKnown RBP11.39□□□□□ -0.59
SCAF11-205ENST00000465950 SF3A1Q15459 793 aaKnown RBP11.39□□□□□ -0.59
SCAF11-205ENST00000465950 DCAF5Q96JK2 942 aa11.39□□□□□ -0.59
SCAF11-205ENST00000465950 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
SCAF11-205ENST00000465950 LRP2BPQ9P2M1 347 aa11.39□□□□□ -0.59
SCAF11-205ENST00000465950 ARHGAP27Q6ZUM4 889 aa11.39□□□□□ -0.59
SCAF11-205ENST00000465950 CNBD1Q8NA66 436 aa11.39□□□□□ -0.59
SCAF11-205ENST00000465950 DESP17661 470 aa11.39□□□□□ -0.59
SCAF11-205ENST00000465950 ELL2O00472 640 aaPredicted RBP11.38□□□□□ -0.59
SCAF11-205ENST00000465950 HSP90AA2PQ14568 343 aaPredicted RBP11.38□□□□□ -0.59
SCAF11-205ENST00000465950 NECTIN2Q92692 538 aa11.38□□□□□ -0.59
SCAF11-205ENST00000465950 GNPATO15228 680 aa11.38□□□□□ -0.59
SCAF11-205ENST00000465950 BMS1Q14692 1282 aaKnown RBP11.38□□□□□ -0.59
SCAF11-205ENST00000465950 TMC4Q7Z404 712 aa11.38□□□□□ -0.59
SCAF11-205ENST00000465950 ANKRD18AQ8IVF6 992 aa11.38□□□□□ -0.59
SCAF11-205ENST00000465950 LRRFIP2Q9Y608 721 aaKnown RBP11.38□□□□□ -0.59
SCAF11-205ENST00000465950 TNFAIP1Q13829 316 aa11.38□□□□□ -0.59
SCAF11-205ENST00000465950 CUL5Q93034 780 aa11.38□□□□□ -0.59
SCAF11-205ENST00000465950 ACSBG1Q96GR2 724 aa11.38□□□□□ -0.59
SCAF11-205ENST00000465950 LRRCC1Q9C099 1032 aa11.38□□□□□ -0.59
SCAF11-205ENST00000465950 SCAF11Q99590 1463 aaKnown RBP11.38□□□□□ -0.59
SCAF11-205ENST00000465950 ATP7AQ04656 1500 aa11.38□□□□□ -0.59
SCAF11-205ENST00000465950 LPXNO60711 386 aa11.38□□□□□ -0.59
SCAF11-205ENST00000465950 USP5P45974 858 aa11.38□□□□□ -0.59
SCAF11-205ENST00000465950 CTNNA3Q9UI47 895 aa11.38□□□□□ -0.59
SCAF11-205ENST00000465950 ATP6V1DQ9Y5K8 247 aa11.38□□□□□ -0.59
SCAF11-205ENST00000465950 METTL24Q5JXM2 366 aa11.37□□□□□ -0.59
SCAF11-205ENST00000465950 CCDC146Q8IYE0 955 aa11.37□□□□□ -0.59
SCAF11-205ENST00000465950 POLR3DP05423 398 aaPredicted RBP11.37□□□□□ -0.59
SCAF11-205ENST00000465950 SHANK2Q9UPX8 1470 aa11.37□□□□□ -0.59
SCAF11-205ENST00000465950 MYL6BP14649 208 aa11.37□□□□□ -0.59
SCAF11-205ENST00000465950 UTP14AQ9BVJ6 771 aaKnown RBP11.37□□□□□ -0.59
SCAF11-205ENST00000465950 PLEKHG1Q9ULL1 1385 aa11.37□□□□□ -0.59
SCAF11-205ENST00000465950 REC8O95072 547 aa11.37□□□□□ -0.59
SCAF11-205ENST00000465950 ANKRD20A12PQ8NF67 263 aa11.37□□□□□ -0.59
SCAF11-205ENST00000465950 DBF4Q9UBU7 674 aaPredicted RBP11.37□□□□□ -0.59
SCAF11-205ENST00000465950 GCP02774 474 aa11.36□□□□□ -0.59
SCAF11-205ENST00000465950 SLC4A3P48751 1232 aa11.36□□□□□ -0.59
SCAF11-205ENST00000465950 VTI1AQ96AJ9 217 aa11.36□□□□□ -0.59
SCAF11-205ENST00000465950 PRKAG2Q9UGJ0 569 aa11.36□□□□□ -0.59
SCAF11-205ENST00000465950 BCS1LQ9Y276 419 aa11.36□□□□□ -0.59
SCAF11-205ENST00000465950 KDM2BQ8NHM5 1336 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms