RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 SPC24Q8NBT2 197 aa16.91■□□□□ 0.3
TGFBR3-204ENST00000465892 BRPF1P55201 1214 aaPredicted RBP16.91■□□□□ 0.3
TGFBR3-204ENST00000465892 SYAP1Q96A49 352 aaPredicted RBP16.91■□□□□ 0.3
TGFBR3-204ENST00000465892 PRIMPOLQ96LW4 560 aa16.91■□□□□ 0.3
TGFBR3-204ENST00000465892 KIF1BO60333 1816 aa16.9■□□□□ 0.3
TGFBR3-204ENST00000465892 API5Q9BZZ5 524 aaKnown RBP16.9■□□□□ 0.3
TGFBR3-204ENST00000465892 MYO3AQ8NEV4 1616 aa16.9■□□□□ 0.3
TGFBR3-204ENST00000465892 GNAI1P63096 354 aa16.9■□□□□ 0.3
TGFBR3-204ENST00000465892 HMGN5P82970 282 aaKnown RBP16.9■□□□□ 0.3
TGFBR3-204ENST00000465892 NFE2L2Q16236 605 aa16.9■□□□□ 0.3
TGFBR3-204ENST00000465892 MEIS3Q99687 375 aa16.9■□□□□ 0.3
TGFBR3-204ENST00000465892 COL3A1P02461 1466 aaPredicted RBP16.9■□□□□ 0.3
TGFBR3-204ENST00000465892 PTCH1Q13635 1447 aa16.9■□□□□ 0.3
TGFBR3-204ENST00000465892 PPRC1Q5VV67 1664 aaKnown RBP16.9■□□□□ 0.3
TGFBR3-204ENST00000465892 CEP85Q6P2H3 762 aa16.9■□□□□ 0.3
TGFBR3-204ENST00000465892 PDCL2Q8N4E4 241 aa16.9■□□□□ 0.3
TGFBR3-204ENST00000465892 ANO2Q9NQ90 1003 aa16.9■□□□□ 0.3
TGFBR3-204ENST00000465892 ZNF428Q96B54 188 aa16.89■□□□□ 0.29
TGFBR3-204ENST00000465892 ZFYVE16Q7Z3T8 1539 aa16.89■□□□□ 0.29
TGFBR3-204ENST00000465892 TULP4Q9NRJ4 1543 aa16.89■□□□□ 0.29
TGFBR3-204ENST00000465892 ANKRD44Q8N8A2 993 aa16.89■□□□□ 0.29
TGFBR3-204ENST00000465892 PIK3R4Q99570 1358 aa16.88■□□□□ 0.29
TGFBR3-204ENST00000465892 RILPL2Q969X0 211 aa16.88■□□□□ 0.29
TGFBR3-204ENST00000465892 CNPY2Q9Y2B0 182 aa16.88■□□□□ 0.29
TGFBR3-204ENST00000465892 RIOK3O14730 519 aaKnown RBP16.88■□□□□ 0.29
TGFBR3-204ENST00000465892 CFAP44Q96MT7 982 aa16.87■□□□□ 0.29
TGFBR3-204ENST00000465892 PYCARDQ9ULZ3 195 aa16.87■□□□□ 0.29
TGFBR3-204ENST00000465892 TERF2IPQ9NYB0 399 aa16.87■□□□□ 0.29
TGFBR3-204ENST00000465892 CABP1Q9NZU7 370 aa16.87■□□□□ 0.29
TGFBR3-204ENST00000465892 EMILIN1Q9Y6C2 1016 aa16.87■□□□□ 0.29
TGFBR3-204ENST00000465892 TRIM6-TRIM34B2RNG4 842 aa16.86■□□□□ 0.29
TGFBR3-204ENST00000465892 GIMAP6Q6P9H5 292 aa16.86■□□□□ 0.29
TGFBR3-204ENST00000465892 EXOC6BQ9Y2D4 811 aa16.86■□□□□ 0.29
TGFBR3-204ENST00000465892 ERCC6L2Q5T890 1561 aa16.86■□□□□ 0.29
TGFBR3-204ENST00000465892 NRXN1Q9ULB1 1477 aa16.86■□□□□ 0.29
TGFBR3-204ENST00000465892 FKBP5Q13451 457 aaPredicted RBP16.86■□□□□ 0.29
TGFBR3-204ENST00000465892 SLC4A10Q6U841 1118 aa16.86■□□□□ 0.29
TGFBR3-204ENST00000465892 IFT57Q9NWB7 429 aa16.86■□□□□ 0.29
TGFBR3-204ENST00000465892 POLKQ9UBT6 870 aa16.86■□□□□ 0.29
TGFBR3-204ENST00000465892 KNDC1Q76NI1 1749 aa16.86■□□□□ 0.29
TGFBR3-204ENST00000465892 ADGRB1O14514 1584 aa16.86■□□□□ 0.29
TGFBR3-204ENST00000465892 PHF14O94880 888 aa16.86■□□□□ 0.29
TGFBR3-204ENST00000465892 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
TGFBR3-204ENST00000465892 AP5Z1O43299 807 aa16.85■□□□□ 0.29
TGFBR3-204ENST00000465892 FIBPO43427 364 aa16.85■□□□□ 0.29
TGFBR3-204ENST00000465892 GTF2F1P35269 517 aaKnown RBP eCLIP16.85■□□□□ 0.292e-6■□□□□ 9.9
TGFBR3-204ENST00000465892 USP32Q8NFA0 1604 aa16.84■□□□□ 0.29
TGFBR3-204ENST00000465892 PDE1AP54750 535 aa16.84■□□□□ 0.29
TGFBR3-204ENST00000465892 SRCIN1Q9C0H9 1055 aa16.84■□□□□ 0.29
TGFBR3-204ENST00000465892 TCHHQ07283 1943 aa16.84■□□□□ 0.29
TGFBR3-204ENST00000465892 FGD1P98174 961 aa16.84■□□□□ 0.29
TGFBR3-204ENST00000465892 PRAM1Q96QH2 718 aa16.84■□□□□ 0.29
TGFBR3-204ENST00000465892 GTPBP4Q9BZE4 634 aaKnown RBP16.84■□□□□ 0.29
TGFBR3-204ENST00000465892 KCNF1Q9H3M0 494 aa16.83■□□□□ 0.29
TGFBR3-204ENST00000465892 CHMP3Q9Y3E7 222 aa16.83■□□□□ 0.29
TGFBR3-204ENST00000465892 MSH6P52701 1360 aa16.83■□□□□ 0.28
TGFBR3-204ENST00000465892 RPAP2Q8IXW5 612 aaPredicted RBP16.83■□□□□ 0.28
TGFBR3-204ENST00000465892 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.83■□□□□ 0.28
TGFBR3-204ENST00000465892 BBXQ8WY36 941 aaPredicted RBP16.83■□□□□ 0.28
TGFBR3-204ENST00000465892 ZC3H13Q5T200 1668 aaKnown RBP16.83■□□□□ 0.28
TGFBR3-204ENST00000465892 F6X3S4 739 aa16.82■□□□□ 0.28
TGFBR3-204ENST00000465892 KDM4AO75164 1064 aa16.82■□□□□ 0.28
TGFBR3-204ENST00000465892 ZNF853P0CG23 659 aa16.82■□□□□ 0.28
TGFBR3-204ENST00000465892 CUL4AQ13619 759 aa16.82■□□□□ 0.28
TGFBR3-204ENST00000465892 DEPDC5O75140 1603 aa16.82■□□□□ 0.28
TGFBR3-204ENST00000465892 ATP10DQ9P241 1426 aa16.82■□□□□ 0.28
TGFBR3-204ENST00000465892 NAA30Q147X3 362 aaPredicted RBP16.82■□□□□ 0.28
TGFBR3-204ENST00000465892 FAM184AQ8NB25 1140 aa16.82■□□□□ 0.28
TGFBR3-204ENST00000465892 ESYT1Q9BSJ8 1104 aa16.82■□□□□ 0.28
TGFBR3-204ENST00000465892 IFT172Q9UG01 1749 aa16.81■□□□□ 0.28
TGFBR3-204ENST00000465892 INO80Q9ULG1 1556 aaPredicted RBP16.81■□□□□ 0.28
TGFBR3-204ENST00000465892 ZBTB22O15209 634 aa16.81■□□□□ 0.28
TGFBR3-204ENST00000465892 CHAF1AQ13111 956 aaPredicted RBP16.81■□□□□ 0.28
TGFBR3-204ENST00000465892 CCDC183Q5T5S1 534 aa16.81■□□□□ 0.28
TGFBR3-204ENST00000465892 HDGFL2Q7Z4V5 671 aaPredicted RBP16.81■□□□□ 0.28
TGFBR3-204ENST00000465892 ZRANB1Q9UGI0 708 aa16.81■□□□□ 0.28
TGFBR3-204ENST00000465892 SETBP1Q9Y6X0 1596 aa16.81■□□□□ 0.28
TGFBR3-204ENST00000465892 ZNF771Q7L3S4 317 aaPredicted RBP16.81■□□□□ 0.28
TGFBR3-204ENST00000465892 SPTLC3Q9NUV7 552 aa16.81■□□□□ 0.28
TGFBR3-204ENST00000465892 ATP7AQ04656 1500 aa16.81■□□□□ 0.28
TGFBR3-204ENST00000465892 FAM135BQ49AJ0 1406 aa16.81■□□□□ 0.28
TGFBR3-204ENST00000465892 MAP4K4O95819 1239 aaPredicted RBP16.8■□□□□ 0.28
TGFBR3-204ENST00000465892 IL25Q9H293 177 aa16.8■□□□□ 0.28
TGFBR3-204ENST00000465892 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
TGFBR3-204ENST00000465892 CGNQ9P2M7 1197 aaKnown RBP16.8■□□□□ 0.28
TGFBR3-204ENST00000465892 MX1P20591 662 aa16.8■□□□□ 0.28
TGFBR3-204ENST00000465892 UVSSAQ2YD98 709 aa16.8■□□□□ 0.28
TGFBR3-204ENST00000465892 KIAA1524Q8TCG1 905 aa16.8■□□□□ 0.28
TGFBR3-204ENST00000465892 RTL1A6NKG5 1358 aa16.8■□□□□ 0.28
TGFBR3-204ENST00000465892 KIF20AO95235 890 aa16.8■□□□□ 0.28
TGFBR3-204ENST00000465892 MCCP23508 829 aa16.8■□□□□ 0.28
TGFBR3-204ENST00000465892 UNC5CLQ8IV45 518 aa16.8■□□□□ 0.28
TGFBR3-204ENST00000465892 RRS1Q15050 365 aaKnown RBP16.79■□□□□ 0.28
TGFBR3-204ENST00000465892 WDR33Q9C0J8 1336 aaKnown RBP16.79■□□□□ 0.28
TGFBR3-204ENST00000465892 PNPLA6Q8IY17 1366 aa16.79■□□□□ 0.28
TGFBR3-204ENST00000465892 VGFO15240 615 aaPredicted RBP16.79■□□□□ 0.28
TGFBR3-204ENST00000465892 LETM1O95202 739 aaPredicted RBP16.79■□□□□ 0.28
TGFBR3-204ENST00000465892 MCM2P49736 904 aa16.79■□□□□ 0.28
TGFBR3-204ENST00000465892 VWDEQ8N2E2 1590 aa16.79■□□□□ 0.28
TGFBR3-204ENST00000465892 MCM10Q7L590 875 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms