RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 CCDC155Q8N6L0 562 aa12.37□□□□□ -0.43
SSB-207ENST00000465871 SLC35F4A4IF30 521 aa12.36□□□□□ -0.43
SSB-207ENST00000465871 VAC14Q08AM6 782 aa12.36□□□□□ -0.43
SSB-207ENST00000465871 TRAK2O60296 914 aa12.35□□□□□ -0.43
SSB-207ENST00000465871 RNF144AP50876 292 aaPredicted RBP12.35□□□□□ -0.43
SSB-207ENST00000465871 WASHC4Q2M389 1173 aa12.35□□□□□ -0.43
SSB-207ENST00000465871 CCDC85AQ96PX6 553 aaPredicted RBP12.35□□□□□ -0.43
SSB-207ENST00000465871 OSBPL3Q9H4L5 887 aa12.35□□□□□ -0.43
SSB-207ENST00000465871 LYSMD3Q7Z3D4 306 aa12.34□□□□□ -0.43
SSB-207ENST00000465871 ESF1Q9H501 851 aaKnown RBP12.34□□□□□ -0.43
SSB-207ENST00000465871 STK17AQ9UEE5 414 aa12.34□□□□□ -0.43
SSB-207ENST00000465871 A0A1W2PRU2 124 aa12.33□□□□□ -0.44
SSB-207ENST00000465871 MEN1O00255 615 aa12.33□□□□□ -0.44
SSB-207ENST00000465871 GPC1P35052 558 aa12.33□□□□□ -0.44
SSB-207ENST00000465871 COG6Q9Y2V7 657 aa12.32□□□□□ -0.44
SSB-207ENST00000465871 SENP3-EIF4A1A0A087X0R7 540 aa12.31□□□□□ -0.44
SSB-207ENST00000465871 MYCP01106 439 aaPredicted RBP12.31□□□□□ -0.44
SSB-207ENST00000465871 ITGA6P23229 1130 aa12.31□□□□□ -0.44
SSB-207ENST00000465871 CLN3Q13286 438 aa12.31□□□□□ -0.44
SSB-207ENST00000465871 SLFNL1Q499Z3 407 aa12.31□□□□□ -0.44
SSB-207ENST00000465871 PHTF2Q8N3S3 785 aa12.31□□□□□ -0.44
SSB-207ENST00000465871 CDCA7Q9BWT1 371 aaPredicted RBP12.31□□□□□ -0.44
SSB-207ENST00000465871 ARHGEF10LQ9HCE6 1279 aa12.31□□□□□ -0.44
SSB-207ENST00000465871 NANOS1Q8WY41 292 aaKnown RBP12.3□□□□□ -0.44
SSB-207ENST00000465871 SOX11P35716 441 aa12.29□□□□□ -0.44
SSB-207ENST00000465871 PRICKLE2Q7Z3G6 844 aa12.29□□□□□ -0.44
SSB-207ENST00000465871 RNF135Q8IUD6 432 aa12.29□□□□□ -0.44
SSB-207ENST00000465871 ZSCAN1Q8NBB4 408 aa12.29□□□□□ -0.44
SSB-207ENST00000465871 NLRP3Q96P20 1036 aa12.29□□□□□ -0.44
SSB-207ENST00000465871 DOLKQ9UPQ8 538 aa12.29□□□□□ -0.44
SSB-207ENST00000465871 LORP23490 312 aaPredicted RBP12.28□□□□□ -0.44
SSB-207ENST00000465871 GNRH1P01148 92 aa12.27□□□□□ -0.45
SSB-207ENST00000465871 CHIC2Q9UKJ5 165 aa12.27□□□□□ -0.45
SSB-207ENST00000465871 FLIIQ13045 1269 aa12.26□□□□□ -0.45
SSB-207ENST00000465871 SLC27A3Q5K4L6 730 aa12.26□□□□□ -0.45
SSB-207ENST00000465871 RAB6BQ9NRW1 208 aa12.26□□□□□ -0.45
SSB-207ENST00000465871 RHOQP17081 205 aa12.25□□□□□ -0.45
SSB-207ENST00000465871 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
SSB-207ENST00000465871 TSGA10IPQ3SY00 556 aa12.25□□□□□ -0.45
SSB-207ENST00000465871 GPR161Q8N6U8 529 aaKnown RBP12.25□□□□□ -0.45
SSB-207ENST00000465871 USP4Q13107 963 aa12.24□□□□□ -0.45
SSB-207ENST00000465871 TMEM132AQ24JP5 1023 aa12.24□□□□□ -0.45
SSB-207ENST00000465871 GRIP2Q9C0E4 1043 aa12.24□□□□□ -0.45
SSB-207ENST00000465871 CDC14CA4D256 554 aa12.23□□□□□ -0.45
SSB-207ENST00000465871 FAM181BA6NEQ2 426 aa12.23□□□□□ -0.45
SSB-207ENST00000465871 WWC1Q8IX03 1113 aa12.23□□□□□ -0.45
SSB-207ENST00000465871 POM121Q96HA1 1249 aa12.23□□□□□ -0.45
SSB-207ENST00000465871 RAD21O60216 631 aa12.22□□□□□ -0.45
SSB-207ENST00000465871 IL2RAP01589 272 aa12.22□□□□□ -0.45
SSB-207ENST00000465871 OXLD1Q5BKU9 147 aa12.22□□□□□ -0.45
SSB-207ENST00000465871 SV2AQ7L0J3 742 aa12.22□□□□□ -0.45
SSB-207ENST00000465871 VWA5B2Q8N398 1253 aa12.22□□□□□ -0.45
SSB-207ENST00000465871 CNKSR1Q969H4 720 aa12.22□□□□□ -0.45
SSB-207ENST00000465871 ESYT1Q9BSJ8 1104 aa12.22□□□□□ -0.45
SSB-207ENST00000465871 UBTFP17480 764 aaKnown RBP12.21□□□□□ -0.45
SSB-207ENST00000465871 KRT76Q01546 638 aa12.21□□□□□ -0.45
SSB-207ENST00000465871 SIRT1Q96EB6 747 aa12.21□□□□□ -0.45
SSB-207ENST00000465871 SPATA31C2B4DYI2 1134 aa12.2□□□□□ -0.46
SSB-207ENST00000465871 MAP7D1Q3KQU3 841 aa12.2□□□□□ -0.46
SSB-207ENST00000465871 PLPP7Q8NBV4 271 aa12.2□□□□□ -0.46
SSB-207ENST00000465871 COL25A1Q9BXS0 654 aaPredicted RBP12.2□□□□□ -0.46
SSB-207ENST00000465871 POU4F2Q12837 409 aa12.19□□□□□ -0.46
SSB-207ENST00000465871 ESCO1Q5FWF5 840 aa12.19□□□□□ -0.46
SSB-207ENST00000465871 NBPF10Q6P3W6 841 aaKnown RBP12.19□□□□□ -0.46
SSB-207ENST00000465871 NBPF15Q8N660 670 aa12.19□□□□□ -0.46
SSB-207ENST00000465871 CNTNAP3BQ96NU0 1288 aa12.19□□□□□ -0.46
SSB-207ENST00000465871 CNTNAP3Q9BZ76 1288 aa12.19□□□□□ -0.46
SSB-207ENST00000465871 WDR44Q5JSH3 913 aa12.18□□□□□ -0.46
SSB-207ENST00000465871 XAGE2Q96GT9 111 aa12.18□□□□□ -0.46
SSB-207ENST00000465871 CUEDC1Q9NWM3 386 aaPredicted RBP12.18□□□□□ -0.46
SSB-207ENST00000465871 DYRK1BQ9Y463 629 aa12.18□□□□□ -0.46
SSB-207ENST00000465871 HRH3Q9Y5N1 445 aa12.18□□□□□ -0.46
SSB-207ENST00000465871 CENPCQ03188 943 aa12.17□□□□□ -0.46
SSB-207ENST00000465871 TAS1R3Q7RTX0 852 aa12.17□□□□□ -0.46
SSB-207ENST00000465871 ALG2Q9H553 416 aa12.17□□□□□ -0.46
SSB-207ENST00000465871 WASLO00401 505 aaPredicted RBP12.16□□□□□ -0.46
SSB-207ENST00000465871 RNFT1Q5M7Z0 435 aa12.16□□□□□ -0.46
SSB-207ENST00000465871 ETNK1Q9HBU6 452 aa12.16□□□□□ -0.46
SSB-207ENST00000465871 ZNF837Q96EG3 531 aaPredicted RBP12.15□□□□□ -0.46
SSB-207ENST00000465871 GMCL1Q96IK5 515 aa12.15□□□□□ -0.46
SSB-207ENST00000465871 ZSCAN10Q96SZ4 725 aaPredicted RBP12.15□□□□□ -0.46
SSB-207ENST00000465871 FHDC1Q9C0D6 1143 aaPredicted RBP12.15□□□□□ -0.46
SSB-207ENST00000465871 PIK3CDO00329 1044 aa12.14□□□□□ -0.47
SSB-207ENST00000465871 TRIM22Q8IYM9 498 aa12.14□□□□□ -0.47
SSB-207ENST00000465871 TIMMDC1Q9NPL8 285 aa12.14□□□□□ -0.47
SSB-207ENST00000465871 STAU1O95793 577 aaKnown RBP12.13□□□□□ -0.47
SSB-207ENST00000465871 RIPOR1Q6ZS17 1223 aa12.13□□□□□ -0.47
SSB-207ENST00000465871 GAS2L1Q99501 681 aaPredicted RBP12.12□□□□□ -0.47
SSB-207ENST00000465871 GTF2E1P29083 439 aaPredicted RBP12.11□□□□□ -0.47
SSB-207ENST00000465871 SCNN1DP51172 638 aa12.11□□□□□ -0.47
SSB-207ENST00000465871 NFATC2IPQ8NCF5 419 aa12.11□□□□□ -0.47
SSB-207ENST00000465871 H7C1W4 665 aa12.1□□□□□ -0.47
SSB-207ENST00000465871 TLR1Q15399 786 aa12.1□□□□□ -0.47
SSB-207ENST00000465871 DBN1Q16643 649 aa12.1□□□□□ -0.47
SSB-207ENST00000465871 GNASQ5JWF2 1037 aa12.1□□□□□ -0.47
SSB-207ENST00000465871 TMEM214Q6NUQ4 689 aaKnown RBP12.1□□□□□ -0.47
SSB-207ENST00000465871 POM121CA8CG34 1229 aa12.09□□□□□ -0.47
SSB-207ENST00000465871 INHAP05111 366 aa12.09□□□□□ -0.47
SSB-207ENST00000465871 SKIP12755 728 aa12.09□□□□□ -0.47
SSB-207ENST00000465871 GDF10P55107 478 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 308.7 ms