RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 PARP4Q9UKK3 1724 aaKnown RBP17.66■□□□□ 0.42
ATF3-208ENST00000465155 USP21Q9UK80 565 aa17.65■□□□□ 0.42
ATF3-208ENST00000465155 MEGF6O75095 1541 aa17.65■□□□□ 0.42
ATF3-208ENST00000465155 AFF2P51816 1311 aa17.65■□□□□ 0.42
ATF3-208ENST00000465155 NFE2L2Q16236 605 aa17.65■□□□□ 0.42
ATF3-208ENST00000465155 CCDC9Q9Y3X0 531 aaKnown RBP17.65■□□□□ 0.42
ATF3-208ENST00000465155 WNK3Q9BYP7 1800 aa17.65■□□□□ 0.42
ATF3-208ENST00000465155 ZBED9Q6R2W3 1325 aa17.64■□□□□ 0.42
ATF3-208ENST00000465155 TATP17735 454 aaPredicted RBP17.64■□□□□ 0.41
ATF3-208ENST00000465155 MTHFSDQ2M296 383 aaKnown RBP17.64■□□□□ 0.41
ATF3-208ENST00000465155 RIPK4P57078 832 aa17.63■□□□□ 0.41
ATF3-208ENST00000465155 SPATA31A1Q5TZJ5 1347 aa17.63■□□□□ 0.41
ATF3-208ENST00000465155 NGEFQ8N5V2 710 aa17.62■□□□□ 0.41
ATF3-208ENST00000465155 GAS2L2Q8NHY3 880 aa17.62■□□□□ 0.41
ATF3-208ENST00000465155 SPATA31A5Q5VU36 1347 aa17.62■□□□□ 0.41
ATF3-208ENST00000465155 SPATA31A7Q8IWB4 1347 aa17.62■□□□□ 0.41
ATF3-208ENST00000465155 PKD1L3Q7Z443 1732 aa17.62■□□□□ 0.41
ATF3-208ENST00000465155 IL2RBP14784 551 aa17.61■□□□□ 0.41
ATF3-208ENST00000465155 VPS72Q15906 364 aa17.61■□□□□ 0.41
ATF3-208ENST00000465155 AMOTQ4VCS5 1084 aa17.61■□□□□ 0.41
ATF3-208ENST00000465155 PLEKHO1Q53GL0 409 aaPredicted RBP17.61■□□□□ 0.41
ATF3-208ENST00000465155 OVOS2A0A0G2JMS6 1433 aa17.61■□□□□ 0.41
ATF3-208ENST00000465155 PLEKHG2Q9H7P9 1386 aa17.6■□□□□ 0.41
ATF3-208ENST00000465155 THRAP3Q9Y2W1 955 aaKnown RBP17.6■□□□□ 0.41
ATF3-208ENST00000465155 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
ATF3-208ENST00000465155 WWC1Q8IX03 1113 aa17.59■□□□□ 0.41
ATF3-208ENST00000465155 TRIM35Q9UPQ4 493 aa17.59■□□□□ 0.41
ATF3-208ENST00000465155 DISP2A7MBM2 1401 aa17.59■□□□□ 0.41
ATF3-208ENST00000465155 ZNF530Q6P9A1 599 aaPredicted RBP17.58■□□□□ 0.41
ATF3-208ENST00000465155 SPG7Q9UQ90 795 aa17.58■□□□□ 0.41
ATF3-208ENST00000465155 ZNF521Q96K83 1311 aa17.58■□□□□ 0.4
ATF3-208ENST00000465155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.58■□□□□ 0.4
ATF3-208ENST00000465155 SHANK3Q9BYB0 1731 aa17.57■□□□□ 0.4
ATF3-208ENST00000465155 VIRMAQ69YN4 1812 aaKnown RBP17.57■□□□□ 0.4
ATF3-208ENST00000465155 LMOD3Q0VAK6 560 aa17.57■□□□□ 0.4
ATF3-208ENST00000465155 ATRNO75882 1429 aa17.56■□□□□ 0.4
ATF3-208ENST00000465155 MAP3K5Q99683 1374 aa17.56■□□□□ 0.4
ATF3-208ENST00000465155 GNAT3A8MTJ3 354 aa17.56■□□□□ 0.4
ATF3-208ENST00000465155 C1orf141Q5JVX7 400 aa17.56■□□□□ 0.4
ATF3-208ENST00000465155 ZCRB1Q8TBF4 217 aaKnown RBP17.56■□□□□ 0.4
ATF3-208ENST00000465155 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
ATF3-208ENST00000465155 AKAP4Q5JQC9 854 aa17.55■□□□□ 0.4
ATF3-208ENST00000465155 BARGINQ6ZT62 677 aa17.55■□□□□ 0.4
ATF3-208ENST00000465155 RTF1Q92541 710 aaKnown RBP17.55■□□□□ 0.4
ATF3-208ENST00000465155 GLI3P10071 1580 aa17.55■□□□□ 0.4
ATF3-208ENST00000465155 DCTN1Q14203 1278 aa17.54■□□□□ 0.4
ATF3-208ENST00000465155 FAM98CQ17RN3 349 aaKnown RBP17.54■□□□□ 0.4
ATF3-208ENST00000465155 CDCA7Q9BWT1 371 aaPredicted RBP17.54■□□□□ 0.4
ATF3-208ENST00000465155 PCDH11XQ9BZA7 1347 aa17.54■□□□□ 0.4
ATF3-208ENST00000465155 PCDH11YQ9BZA8 1340 aa17.54■□□□□ 0.4
ATF3-208ENST00000465155 MCM10Q7L590 875 aa17.54■□□□□ 0.4
ATF3-208ENST00000465155 GJD4Q96KN9 370 aaPredicted RBP17.54■□□□□ 0.4
ATF3-208ENST00000465155 THUMPD2Q9BTF0 503 aaKnown RBP17.54■□□□□ 0.4
ATF3-208ENST00000465155 QTRT2Q9H974 415 aaKnown RBP17.54■□□□□ 0.4
ATF3-208ENST00000465155 LRRC37A3O60309 1634 aa17.53■□□□□ 0.4
ATF3-208ENST00000465155 DCAF8L1A6NGE4 600 aa17.53■□□□□ 0.4
ATF3-208ENST00000465155 HTATSF1O43719 755 aaKnown RBP17.53■□□□□ 0.4
ATF3-208ENST00000465155 PHKG2P15735 406 aa17.53■□□□□ 0.4
ATF3-208ENST00000465155 GOLGA2Q08379 1002 aa17.53■□□□□ 0.4
ATF3-208ENST00000465155 WDR63Q8IWG1 891 aa17.53■□□□□ 0.4
ATF3-208ENST00000465155 IFNL2Q8IZJ0 200 aa17.53■□□□□ 0.4
ATF3-208ENST00000465155 CYP27B1O15528 508 aa17.52■□□□□ 0.4
ATF3-208ENST00000465155 PDE3BQ13370 1112 aa17.52■□□□□ 0.4
ATF3-208ENST00000465155 ZNF772Q68DY9 489 aaPredicted RBP17.52■□□□□ 0.4
ATF3-208ENST00000465155 ILDR1Q86SU0 546 aaPredicted RBP17.52■□□□□ 0.4
ATF3-208ENST00000465155 CDCA7LQ96GN5 454 aa17.52■□□□□ 0.4
ATF3-208ENST00000465155 TNS2Q63HR2 1409 aa17.52■□□□□ 0.39
ATF3-208ENST00000465155 EXOC5O00471 708 aa17.51■□□□□ 0.39
ATF3-208ENST00000465155 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
ATF3-208ENST00000465155 SCN11AQ9UI33 1791 aa17.51■□□□□ 0.39
ATF3-208ENST00000465155 DDB1Q16531 1140 aa17.5■□□□□ 0.39
ATF3-208ENST00000465155 MPRIPQ6WCQ1 1025 aa17.5■□□□□ 0.39
ATF3-208ENST00000465155 THSD7AQ9UPZ6 1657 aa17.5■□□□□ 0.39
ATF3-208ENST00000465155 A0A0G2JS52 829 aa17.5■□□□□ 0.39
ATF3-208ENST00000465155 MYT1Q01538 1121 aa17.5■□□□□ 0.39
ATF3-208ENST00000465155 IL17REQ8NFR9 667 aa17.5■□□□□ 0.39
ATF3-208ENST00000465155 SPINK5Q9NQ38 1064 aaPredicted RBP17.5■□□□□ 0.39
ATF3-208ENST00000465155 ADAMTS7Q9UKP4 1686 aa17.49■□□□□ 0.39
ATF3-208ENST00000465155 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
ATF3-208ENST00000465155 LGR6Q9HBX8 967 aa17.49■□□□□ 0.39
ATF3-208ENST00000465155 CENPBP07199 599 aaPredicted RBP17.48■□□□□ 0.39
ATF3-208ENST00000465155 IL16Q14005 1332 aa17.48■□□□□ 0.39
ATF3-208ENST00000465155 CEMIPQ8WUJ3 1361 aa17.48■□□□□ 0.39
ATF3-208ENST00000465155 E9PSI1 815 aa17.47■□□□□ 0.39
ATF3-208ENST00000465155 KDM6AO15550 1401 aaPredicted RBP17.47■□□□□ 0.39
ATF3-208ENST00000465155 RNMTO43148 476 aaKnown RBP17.47■□□□□ 0.39
ATF3-208ENST00000465155 HSP90AB1P08238 724 aaKnown RBP17.47■□□□□ 0.39
ATF3-208ENST00000465155 SLFN5Q08AF3 891 aa17.47■□□□□ 0.39
ATF3-208ENST00000465155 LAS1LQ9Y4W2 734 aaKnown RBP17.47■□□□□ 0.39
ATF3-208ENST00000465155 DCAF5Q96JK2 942 aa17.46■□□□□ 0.39
ATF3-208ENST00000465155 IFT57Q9NWB7 429 aa17.45■□□□□ 0.38
ATF3-208ENST00000465155 SIPA1L3O60292 1781 aaPredicted RBP17.45■□□□□ 0.38
ATF3-208ENST00000465155 ONECUT3O60422 494 aaPredicted RBP17.44■□□□□ 0.38
ATF3-208ENST00000465155 GNAI1P63096 354 aa17.44■□□□□ 0.38
ATF3-208ENST00000465155 TEFQ10587 303 aa17.44■□□□□ 0.38
ATF3-208ENST00000465155 NKX1-1Q15270 411 aaPredicted RBP17.44■□□□□ 0.38
ATF3-208ENST00000465155 TRMT2AQ8IZ69 625 aaKnown RBP17.44■□□□□ 0.38
ATF3-208ENST00000465155 CFAP44Q96MT7 982 aa17.44■□□□□ 0.38
ATF3-208ENST00000465155 MYH16Q9H6N6 1097 aa17.44■□□□□ 0.38
ATF3-208ENST00000465155 TOGARAM1Q9Y4F4 1720 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms