RNA–Protein interactions for RNA: ENST00000465030.1

SNX12-203, Transcript of sorting nexin 12, humanhuman

TSL 2

Gene SNX12, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-203ENST00000465030 ERBB3P21860 1342 aa22.67■■□□□ 1.22
SNX12-203ENST00000465030 SYTL4Q96C24 671 aaPredicted RBP22.67■■□□□ 1.22
SNX12-203ENST00000465030 NSD2O96028 1365 aa22.66■■□□□ 1.22
SNX12-203ENST00000465030 DCAF11Q8TEB1 546 aa22.66■■□□□ 1.22
SNX12-203ENST00000465030 ANKRD36BQ8N2N9 1353 aa22.65■■□□□ 1.22
SNX12-203ENST00000465030 PRIM1P49642 420 aaKnown RBP22.65■■□□□ 1.22
SNX12-203ENST00000465030 CABP2Q9NPB3 220 aa22.65■■□□□ 1.22
SNX12-203ENST00000465030 CABP1Q9NZU7 370 aa22.65■■□□□ 1.22
SNX12-203ENST00000465030 QRICH2Q9H0J4 1663 aa22.64■■□□□ 1.21
SNX12-203ENST00000465030 FLAD1Q8NFF5 587 aa22.63■■□□□ 1.21
SNX12-203ENST00000465030 DDX54Q8TDD1 881 aaKnown RBP22.63■■□□□ 1.21
SNX12-203ENST00000465030 STAC3Q96MF2 364 aa22.6■■□□□ 1.21
SNX12-203ENST00000465030 TTC21BQ7Z4L5 1316 aa22.58■■□□□ 1.21
SNX12-203ENST00000465030 C10orf71Q711Q0 1435 aa22.58■■□□□ 1.21
SNX12-203ENST00000465030 DOT1LQ8TEK3 1739 aa22.58■■□□□ 1.21
SNX12-203ENST00000465030 USP47Q96K76 1375 aa22.57■■□□□ 1.2
SNX12-203ENST00000465030 PLEKHG2Q9H7P9 1386 aa22.57■■□□□ 1.2
SNX12-203ENST00000465030 USP54Q70EL1 1684 aa22.56■■□□□ 1.2
SNX12-203ENST00000465030 SMC1BQ8NDV3 1235 aa22.56■■□□□ 1.2
SNX12-203ENST00000465030 C5P01031 1676 aa22.55■■□□□ 1.2
SNX12-203ENST00000465030 FAM161AQ3B820 660 aa22.55■■□□□ 1.2
SNX12-203ENST00000465030 ANKRD24Q8TF21 1146 aa22.55■■□□□ 1.2
SNX12-203ENST00000465030 PXDNLA1KZ92 1463 aa22.54■■□□□ 1.2
SNX12-203ENST00000465030 ARHGAP27Q6ZUM4 889 aa22.54■■□□□ 1.2
SNX12-203ENST00000465030 TTC21AQ8NDW8 1320 aa22.54■■□□□ 1.2
SNX12-203ENST00000465030 KDM2BQ8NHM5 1336 aa22.54■■□□□ 1.2
SNX12-203ENST00000465030 KCPQ6ZWJ8 1503 aa22.53■■□□□ 1.2
SNX12-203ENST00000465030 BCS1LQ9Y276 419 aa22.53■■□□□ 1.2
SNX12-203ENST00000465030 C9orf131Q5VYM1 1079 aa22.51■■□□□ 1.19
SNX12-203ENST00000465030 HMGB2P26583 209 aaKnown RBP22.5■■□□□ 1.19
SNX12-203ENST00000465030 AMIGO3Q86WK7 504 aa22.5■■□□□ 1.19
SNX12-203ENST00000465030 RRAGCQ9HB90 399 aa22.5■■□□□ 1.19
SNX12-203ENST00000465030 ZNF692Q9BU19 519 aaPredicted RBP22.49■■□□□ 1.19
SNX12-203ENST00000465030 CENPJQ9HC77 1338 aaPredicted RBP22.49■■□□□ 1.19
SNX12-203ENST00000465030 AK7Q96M32 723 aa22.47■■□□□ 1.19
SNX12-203ENST00000465030 TOGARAM1Q9Y4F4 1720 aa22.47■■□□□ 1.19
SNX12-203ENST00000465030 KIAA1551Q9HCM1 1747 aa22.46■■□□□ 1.19
SNX12-203ENST00000465030 PHF14O94880 888 aa22.46■■□□□ 1.19
SNX12-203ENST00000465030 TNRC6CQ9HCJ0 1690 aaKnown RBP22.46■■□□□ 1.19
SNX12-203ENST00000465030 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.45■■□□□ 1.18
SNX12-203ENST00000465030 TGFB2P61812 414 aa22.45■■□□□ 1.18
SNX12-203ENST00000465030 C4BP0C0L5 1744 aa22.44■■□□□ 1.18
SNX12-203ENST00000465030 SMIM5Q71RC9 77 aa22.44■■□□□ 1.18
SNX12-203ENST00000465030 PKD1L3Q7Z443 1732 aa22.44■■□□□ 1.18
SNX12-203ENST00000465030 NSD3Q9BZ95 1437 aa22.44■■□□□ 1.18
SNX12-203ENST00000465030 PRDM10Q9NQV6 1147 aa22.44■■□□□ 1.18
SNX12-203ENST00000465030 TAF1LQ8IZX4 1826 aa22.43■■□□□ 1.18
SNX12-203ENST00000465030 A0A0G2JLW4 131 aa22.43■■□□□ 1.18
SNX12-203ENST00000465030 PALLDQ8WX93 1383 aa22.42■■□□□ 1.18
SNX12-203ENST00000465030 FCHSD2O94868 740 aa22.42■■□□□ 1.18
SNX12-203ENST00000465030 KIF13BQ9NQT8 1826 aa22.42■■□□□ 1.18
SNX12-203ENST00000465030 LTN1O94822 1766 aa22.42■■□□□ 1.18
SNX12-203ENST00000465030 N4BP2Q86UW6 1770 aaPredicted RBP22.41■■□□□ 1.18
SNX12-203ENST00000465030 FOXN1O15353 648 aa22.41■■□□□ 1.18
SNX12-203ENST00000465030 ZCRB1Q8TBF4 217 aaKnown RBP22.41■■□□□ 1.18
SNX12-203ENST00000465030 USP31Q70CQ4 1352 aa22.4■■□□□ 1.18
SNX12-203ENST00000465030 UBR3Q6ZT12 1888 aa22.4■■□□□ 1.18
SNX12-203ENST00000465030 KIAA1210Q9ULL0 1709 aa22.4■■□□□ 1.18
SNX12-203ENST00000465030 MMP10P09238 476 aa22.39■■□□□ 1.17
SNX12-203ENST00000465030 SSFA2P28290 1259 aa22.39■■□□□ 1.17
SNX12-203ENST00000465030 RNF181Q9P0P0 153 aa22.39■■□□□ 1.17
SNX12-203ENST00000465030 NBPF1Q3BBV0 1214 aa22.38■■□□□ 1.17
SNX12-203ENST00000465030 KTN1Q86UP2 1357 aaKnown RBP22.38■■□□□ 1.17
SNX12-203ENST00000465030 DPEP1P16444 411 aa22.37■■□□□ 1.17
SNX12-203ENST00000465030 FAM208AQ9UK61 1670 aaKnown RBP22.36■■□□□ 1.17
SNX12-203ENST00000465030 MLLT1Q03111 559 aaPredicted RBP22.36■■□□□ 1.17
SNX12-203ENST00000465030 EVC2Q86UK5 1308 aa22.35■■□□□ 1.17
SNX12-203ENST00000465030 ABHD8Q96I13 439 aa22.35■■□□□ 1.17
SNX12-203ENST00000465030 MEGF6O75095 1541 aa22.35■■□□□ 1.17
SNX12-203ENST00000465030 LTV1Q96GA3 475 aaPredicted RBP22.34■■□□□ 1.17
SNX12-203ENST00000465030 CTCFP49711 727 aaPredicted RBP22.33■■□□□ 1.17
SNX12-203ENST00000465030 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.33■■□□□ 1.17
SNX12-203ENST00000465030 BRCA1P38398 1863 aaKnown RBP22.32■■□□□ 1.16
SNX12-203ENST00000465030 MKRN1Q9UHC7 482 aaKnown RBP22.32■■□□□ 1.16
SNX12-203ENST00000465030 NME9Q86XW9 330 aa22.31■■□□□ 1.16
SNX12-203ENST00000465030 IP6K1Q92551 441 aa22.31■■□□□ 1.16
SNX12-203ENST00000465030 DCAF5Q96JK2 942 aa22.31■■□□□ 1.16
SNX12-203ENST00000465030 ARFGEF1Q9Y6D6 1849 aa22.31■■□□□ 1.16
SNX12-203ENST00000465030 VEGFAP15692 232 aaPredicted RBP22.3■■□□□ 1.16
SNX12-203ENST00000465030 KCNA3P22001 575 aa22.29■■□□□ 1.16
SNX12-203ENST00000465030 MPRIPQ6WCQ1 1025 aa22.29■■□□□ 1.16
SNX12-203ENST00000465030 SMARCC1Q92922 1105 aaPredicted RBP22.29■■□□□ 1.16
SNX12-203ENST00000465030 CREBZFQ9NS37 354 aa22.29■■□□□ 1.16
SNX12-203ENST00000465030 ZC3H4Q9UPT8 1303 aaKnown RBP22.29■■□□□ 1.16
SNX12-203ENST00000465030 MON2Q7Z3U7 1717 aa22.28■■□□□ 1.16
SNX12-203ENST00000465030 AIDAQ96BJ3 306 aa22.28■■□□□ 1.16
SNX12-203ENST00000465030 RGS19P49795 217 aa22.27■■□□□ 1.16
SNX12-203ENST00000465030 LINC00116Q8NCU8 138 aa22.27■■□□□ 1.16
SNX12-203ENST00000465030 CCDC87Q9NVE4 849 aa22.27■■□□□ 1.16
SNX12-203ENST00000465030 GNPATO15228 680 aa22.26■■□□□ 1.15
SNX12-203ENST00000465030 PIM2Q9P1W9 311 aa22.26■■□□□ 1.15
SNX12-203ENST00000465030 SBNO2Q9Y2G9 1366 aa22.25■■□□□ 1.15
SNX12-203ENST00000465030 LBX1P52954 281 aa22.24■■□□□ 1.15
SNX12-203ENST00000465030 DALRD3Q5D0E6 543 aaKnown RBP22.24■■□□□ 1.15
SNX12-203ENST00000465030 CGNL1Q0VF96 1302 aa22.24■■□□□ 1.15
SNX12-203ENST00000465030 CNTNAP1P78357 1384 aa22.24■■□□□ 1.15
SNX12-203ENST00000465030 GLTPD2A6NH11 291 aa22.23■■□□□ 1.15
SNX12-203ENST00000465030 NLGN1Q8N2Q7 840 aa22.23■■□□□ 1.15
SNX12-203ENST00000465030 C4AP0C0L4 1744 aa22.21■■□□□ 1.15
SNX12-203ENST00000465030 TMF1P82094 1093 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms