RNA–Protein interactions for RNA: ENST00000464699.5

KRTCAP3-205, Transcript of keratinocyte associated protein 3, humanhuman

TSL 3

Gene KRTCAP3, Length 724 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-205ENST00000464699 ZEB1P37275 1124 aaPredicted RBP34.39■■■■□ 3.1
KRTCAP3-205ENST00000464699 MEGF6O75095 1541 aa34.39■■■■□ 3.1
KRTCAP3-205ENST00000464699 EIF4A2Q14240 407 aaKnown RBP34.38■■■■□ 3.09
KRTCAP3-205ENST00000464699 CNGB1Q14028 1251 aaPredicted RBP34.37■■■■□ 3.09
KRTCAP3-205ENST00000464699 ZCRB1Q8TBF4 217 aaKnown RBP34.37■■■■□ 3.09
KRTCAP3-205ENST00000464699 DDX54Q8TDD1 881 aaKnown RBP34.37■■■■□ 3.09
KRTCAP3-205ENST00000464699 EYA1Q99502 592 aa34.37■■■■□ 3.09
KRTCAP3-205ENST00000464699 TATP17735 454 aaPredicted RBP34.36■■■■□ 3.09
KRTCAP3-205ENST00000464699 BCL11BQ9C0K0 894 aaPredicted RBP34.34■■■■□ 3.09
KRTCAP3-205ENST00000464699 NCAPD2Q15021 1401 aa34.32■■■■□ 3.08
KRTCAP3-205ENST00000464699 SHANK3Q9BYB0 1731 aa34.31■■■■□ 3.08
KRTCAP3-205ENST00000464699 PTF1AQ7RTS3 328 aa34.31■■■■□ 3.08
KRTCAP3-205ENST00000464699 RGPD3A6NKT7 1758 aaPredicted RBP34.31■■■■□ 3.08
KRTCAP3-205ENST00000464699 RGPD4Q7Z3J3 1758 aa34.31■■■■□ 3.08
KRTCAP3-205ENST00000464699 MTHFSP49914 203 aa34.3■■■■□ 3.08
KRTCAP3-205ENST00000464699 NBPF14Q5TI25 921 aa34.28■■■■□ 3.08
KRTCAP3-205ENST00000464699 ACSBG1Q96GR2 724 aa34.28■■■■□ 3.08
KRTCAP3-205ENST00000464699 KCNQ2O43526 872 aa34.26■■■■□ 3.08
KRTCAP3-205ENST00000464699 NHSQ6T4R5 1651 aa34.25■■■■□ 3.07
KRTCAP3-205ENST00000464699 IGSF1Q8N6C5 1336 aa34.24■■■■□ 3.07
KRTCAP3-205ENST00000464699 PLSCR1O15162 318 aa34.22■■■■□ 3.07
KRTCAP3-205ENST00000464699 PCDH11XQ9BZA7 1347 aa34.21■■■■□ 3.07
KRTCAP3-205ENST00000464699 PCDH11YQ9BZA8 1340 aa34.21■■■■□ 3.07
KRTCAP3-205ENST00000464699 IL13P35225 146 aa34.2■■■■□ 3.07
KRTCAP3-205ENST00000464699 PKD1L3Q7Z443 1732 aa34.2■■■■□ 3.07
KRTCAP3-205ENST00000464699 SPG7Q9UQ90 795 aa34.19■■■■□ 3.06
KRTCAP3-205ENST00000464699 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.17■■■■□ 3.06
KRTCAP3-205ENST00000464699 BTAF1O14981 1849 aa34.16■■■■□ 3.06
KRTCAP3-205ENST00000464699 CYP27B1O15528 508 aa34.16■■■■□ 3.06
KRTCAP3-205ENST00000464699 DOT1LQ8TEK3 1739 aa34.16■■■■□ 3.06
KRTCAP3-205ENST00000464699 PRIM1P49642 420 aaKnown RBP34.14■■■■□ 3.06
KRTCAP3-205ENST00000464699 SPON1Q9HCB6 807 aa34.14■■■■□ 3.06
KRTCAP3-205ENST00000464699 SYTL4Q96C24 671 aaPredicted RBP34.13■■■■□ 3.05
KRTCAP3-205ENST00000464699 CASZ1Q86V15 1759 aa34.13■■■■□ 3.05
KRTCAP3-205ENST00000464699 DIAPH1O60610 1272 aaKnown RBP34.12■■■■□ 3.05
KRTCAP3-205ENST00000464699 DDX10Q13206 875 aaKnown RBP34.12■■■■□ 3.05
KRTCAP3-205ENST00000464699 SULT6B1Q6IMI4 303 aa34.12■■■■□ 3.05
KRTCAP3-205ENST00000464699 AEBP1Q8IUX7 1158 aa34.12■■■■□ 3.05
KRTCAP3-205ENST00000464699 PLEKHG2Q9H7P9 1386 aa34.1■■■■□ 3.05
KRTCAP3-205ENST00000464699 PROM2Q8N271 834 aa34.09■■■■□ 3.05
KRTCAP3-205ENST00000464699 PPP2R1AP30153 589 aa34.08■■■■□ 3.05
KRTCAP3-205ENST00000464699 TXNRD1Q16881 649 aa34.07■■■■□ 3.04
KRTCAP3-205ENST00000464699 PLEKHO1Q53GL0 409 aaPredicted RBP34.07■■■■□ 3.04
KRTCAP3-205ENST00000464699 ANO8Q9HCE9 1232 aaPredicted RBP34.07■■■■□ 3.04
KRTCAP3-205ENST00000464699 KDRP35968 1356 aa34.07■■■■□ 3.04
KRTCAP3-205ENST00000464699 NKX1-1Q15270 411 aaPredicted RBP34.06■■■■□ 3.04
KRTCAP3-205ENST00000464699 IFNL2Q8IZJ0 200 aa34.06■■■■□ 3.04
KRTCAP3-205ENST00000464699 PPP1R1BQ9UD71 204 aaPredicted RBP34.06■■■■□ 3.04
KRTCAP3-205ENST00000464699 YY1P25490 414 aa34.05■■■■□ 3.04
KRTCAP3-205ENST00000464699 COL3A1P02461 1466 aaPredicted RBP34.05■■■■□ 3.04
KRTCAP3-205ENST00000464699 PHKG2P15735 406 aa34.04■■■■□ 3.04
KRTCAP3-205ENST00000464699 AMOTQ4VCS5 1084 aa34.04■■■■□ 3.04
KRTCAP3-205ENST00000464699 CFAP53Q96M91 514 aa34.04■■■■□ 3.04
KRTCAP3-205ENST00000464699 HMOX1P09601 288 aa34.02■■■■□ 3.04
KRTCAP3-205ENST00000464699 ITGB4P16144 1822 aa34.02■■■■□ 3.04
KRTCAP3-205ENST00000464699 TOGARAM1Q9Y4F4 1720 aa34■■■■□ 3.03
KRTCAP3-205ENST00000464699 U2SURPO15042 1029 aaKnown RBP33.99■■■■□ 3.03
KRTCAP3-205ENST00000464699 ZNF530Q6P9A1 599 aaPredicted RBP33.99■■■■□ 3.03
KRTCAP3-205ENST00000464699 MPRIPQ6WCQ1 1025 aa33.98■■■■□ 3.03
KRTCAP3-205ENST00000464699 HSP90AB1P08238 724 aaKnown RBP33.94■■■■□ 3.02
KRTCAP3-205ENST00000464699 C1orf141Q5JVX7 400 aa33.93■■■■□ 3.02
KRTCAP3-205ENST00000464699 PDGFDQ9GZP0 370 aaPredicted RBP33.93■■■■□ 3.02
KRTCAP3-205ENST00000464699 LY75O60449 1722 aa33.93■■■■□ 3.02
KRTCAP3-205ENST00000464699 NUDCQ9Y266 331 aa33.92■■■■□ 3.02
KRTCAP3-205ENST00000464699 DCAF5Q96JK2 942 aa33.91■■■■□ 3.02
KRTCAP3-205ENST00000464699 LRRC4BQ9NT99 713 aa33.91■■■■□ 3.02
KRTCAP3-205ENST00000464699 DCAF8L1A6NGE4 600 aa33.9■■■■□ 3.02
KRTCAP3-205ENST00000464699 SLC27A3Q5K4L6 730 aa33.9■■■■□ 3.02
KRTCAP3-205ENST00000464699 PIGBQ92521 554 aa33.9■■■■□ 3.02
KRTCAP3-205ENST00000464699 RALBP1Q15311 655 aa33.89■■■■□ 3.02
KRTCAP3-205ENST00000464699 STK32BQ9NY57 414 aa33.89■■■■□ 3.02
KRTCAP3-205ENST00000464699 TMOD3Q9NYL9 352 aa33.89■■■■□ 3.02
KRTCAP3-205ENST00000464699 PTGER2P43116 358 aa33.87■■■■□ 3.01
KRTCAP3-205ENST00000464699 ERVV-2B6SEH9 535 aa33.86■■■■□ 3.01
KRTCAP3-205ENST00000464699 ZBTB7AO95365 584 aa33.85■■■■□ 3.01
KRTCAP3-205ENST00000464699 KCNQ4P56696 695 aa33.85■■■■□ 3.01
KRTCAP3-205ENST00000464699 SLC15A2Q16348 729 aa33.85■■■■□ 3.01
KRTCAP3-205ENST00000464699 SMARCC1Q92922 1105 aaPredicted RBP33.85■■■■□ 3.01
KRTCAP3-205ENST00000464699 AKAP4Q5JQC9 854 aa33.84■■■■□ 3.01
KRTCAP3-205ENST00000464699 CCNL1Q9UK58 526 aaPredicted RBP33.84■■■■□ 3.01
KRTCAP3-205ENST00000464699 KDM6AO15550 1401 aaPredicted RBP33.84■■■■□ 3.01
KRTCAP3-205ENST00000464699 PALLDQ8WX93 1383 aa33.84■■■■□ 3.01
KRTCAP3-205ENST00000464699 U2AF1L5P0DN76 240 aaPredicted RBP33.83■■■■□ 3.01
KRTCAP3-205ENST00000464699 U2AF1Q01081 240 aaKnown RBP eCLIP33.83■■■■□ 3.01
KRTCAP3-205ENST00000464699 MTHFSDQ2M296 383 aaKnown RBP33.83■■■■□ 3.01
KRTCAP3-205ENST00000464699 PAPPAQ13219 1627 aa33.82■■■■□ 3.01
KRTCAP3-205ENST00000464699 ZNF316A6NFI3 1004 aaPredicted RBP33.82■■■■□ 3
KRTCAP3-205ENST00000464699 SCN11AQ9UI33 1791 aa33.8■■■■□ 3
KRTCAP3-205ENST00000464699 CABP4P57796 275 aa33.8■■■■□ 3
KRTCAP3-205ENST00000464699 RSPH6AQ9H0K4 717 aa33.79■■■■□ 3
KRTCAP3-205ENST00000464699 ASAP1Q9ULH1 1129 aa33.79■■■■□ 3
KRTCAP3-205ENST00000464699 PRKAR2BP31323 418 aa33.78■■■■□ 3
KRTCAP3-205ENST00000464699 VIRMAQ69YN4 1812 aaKnown RBP33.78■■■■□ 3
KRTCAP3-205ENST00000464699 ATF5Q9Y2D1 282 aaPredicted RBP33.77■■■■□ 3
KRTCAP3-205ENST00000464699 ZNF827Q17R98 1081 aa33.76■■■□□ 2.99
KRTCAP3-205ENST00000464699 FCHSD2O94868 740 aa33.75■■■□□ 2.99
KRTCAP3-205ENST00000464699 AKT1S1Q96B36 256 aa33.75■■■□□ 2.99
KRTCAP3-205ENST00000464699 SGIP1Q9BQI5 828 aa33.75■■■□□ 2.99
KRTCAP3-205ENST00000464699 ATG3Q9NT62 314 aa33.75■■■□□ 2.99
KRTCAP3-205ENST00000464699 NFATC2IPQ8NCF5 419 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms