RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 PARP4Q9UKK3 1724 aaKnown RBP18.44■□□□□ 0.54
PHACTR4-203ENST00000463428 OVOS2A0A0G2JMS6 1433 aa18.44■□□□□ 0.54
PHACTR4-203ENST00000463428 POTEAQ6S8J7 498 aa18.43■□□□□ 0.54
PHACTR4-203ENST00000463428 PKD1L3Q7Z443 1732 aa18.42■□□□□ 0.54
PHACTR4-203ENST00000463428 FAM98CQ17RN3 349 aaKnown RBP18.42■□□□□ 0.54
PHACTR4-203ENST00000463428 CDCA7Q9BWT1 371 aaPredicted RBP18.42■□□□□ 0.54
PHACTR4-203ENST00000463428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.42■□□□□ 0.54
PHACTR4-203ENST00000463428 THSD7AQ9UPZ6 1657 aa18.42■□□□□ 0.54
PHACTR4-203ENST00000463428 SHANK3Q9BYB0 1731 aa18.41■□□□□ 0.54
PHACTR4-203ENST00000463428 RBM6P78332 1123 aaKnown RBP18.4■□□□□ 0.54
PHACTR4-203ENST00000463428 MTHFSDQ2M296 383 aaKnown RBP18.4■□□□□ 0.54
PHACTR4-203ENST00000463428 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
PHACTR4-203ENST00000463428 AMOTQ4VCS5 1084 aa18.4■□□□□ 0.54
PHACTR4-203ENST00000463428 PLEKHO1Q53GL0 409 aaPredicted RBP18.4■□□□□ 0.54
PHACTR4-203ENST00000463428 DLG5Q8TDM6 1919 aa18.38■□□□□ 0.53
PHACTR4-203ENST00000463428 LRRC37A3O60309 1634 aa18.38■□□□□ 0.53
PHACTR4-203ENST00000463428 APAF1O14727 1248 aa18.38■□□□□ 0.53
PHACTR4-203ENST00000463428 ZCRB1Q8TBF4 217 aaKnown RBP18.38■□□□□ 0.53
PHACTR4-203ENST00000463428 MAPK8IP3Q9UPT6 1336 aa18.37■□□□□ 0.53
PHACTR4-203ENST00000463428 RXRBP28702 533 aa18.37■□□□□ 0.53
PHACTR4-203ENST00000463428 TMPOP42166 694 aaKnown RBP18.37■□□□□ 0.53
PHACTR4-203ENST00000463428 SPG7Q9UQ90 795 aa18.37■□□□□ 0.53
PHACTR4-203ENST00000463428 EXOC5O00471 708 aa18.36■□□□□ 0.53
PHACTR4-203ENST00000463428 CYP27B1O15528 508 aa18.36■□□□□ 0.53
PHACTR4-203ENST00000463428 NEFMP07197 916 aa18.36■□□□□ 0.53
PHACTR4-203ENST00000463428 NFE2L2Q16236 605 aa18.36■□□□□ 0.53
PHACTR4-203ENST00000463428 GAS2L2Q8NHY3 880 aa18.36■□□□□ 0.53
PHACTR4-203ENST00000463428 TNS2Q63HR2 1409 aa18.36■□□□□ 0.53
PHACTR4-203ENST00000463428 DDB1Q16531 1140 aa18.35■□□□□ 0.53
PHACTR4-203ENST00000463428 SEPT12Q8IYM1 358 aa18.34■□□□□ 0.53
PHACTR4-203ENST00000463428 BRWD3Q6RI45 1802 aa18.33■□□□□ 0.53
PHACTR4-203ENST00000463428 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.53
PHACTR4-203ENST00000463428 PHKG2P15735 406 aa18.33■□□□□ 0.53
PHACTR4-203ENST00000463428 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.53
PHACTR4-203ENST00000463428 ZNF530Q6P9A1 599 aaPredicted RBP18.33■□□□□ 0.53
PHACTR4-203ENST00000463428 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.53
PHACTR4-203ENST00000463428 AKAP4Q5JQC9 854 aa18.32■□□□□ 0.52
PHACTR4-203ENST00000463428 IFNL2Q8IZJ0 200 aa18.32■□□□□ 0.52
PHACTR4-203ENST00000463428 PCDH11XQ9BZA7 1347 aa18.32■□□□□ 0.52
PHACTR4-203ENST00000463428 PCDH11YQ9BZA8 1340 aa18.32■□□□□ 0.52
PHACTR4-203ENST00000463428 RIPK4P57078 832 aa18.32■□□□□ 0.52
PHACTR4-203ENST00000463428 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
PHACTR4-203ENST00000463428 VIRMAQ69YN4 1812 aaKnown RBP18.31■□□□□ 0.52
PHACTR4-203ENST00000463428 ADAMTS7Q9UKP4 1686 aa18.31■□□□□ 0.52
PHACTR4-203ENST00000463428 NKX1-1Q15270 411 aaPredicted RBP18.31■□□□□ 0.52
PHACTR4-203ENST00000463428 MARCH10Q8NA82 808 aaPredicted RBP18.31■□□□□ 0.52
PHACTR4-203ENST00000463428 DDX54Q8TDD1 881 aaKnown RBP18.31■□□□□ 0.52
PHACTR4-203ENST00000463428 MAP3K5Q99683 1374 aa18.3■□□□□ 0.52
PHACTR4-203ENST00000463428 RGS12O14924 1447 aa18.3■□□□□ 0.52
PHACTR4-203ENST00000463428 GNAT3A8MTJ3 354 aa18.3■□□□□ 0.52
PHACTR4-203ENST00000463428 HTATSF1O43719 755 aaKnown RBP18.3■□□□□ 0.52
PHACTR4-203ENST00000463428 NEUROD2Q15784 382 aa18.3■□□□□ 0.52
PHACTR4-203ENST00000463428 A0A0G2JS52 829 aa18.29■□□□□ 0.52
PHACTR4-203ENST00000463428 MYT1Q01538 1121 aa18.29■□□□□ 0.52
PHACTR4-203ENST00000463428 CCDC27Q2M243 656 aa18.29■□□□□ 0.52
PHACTR4-203ENST00000463428 C1orf141Q5JVX7 400 aa18.29■□□□□ 0.52
PHACTR4-203ENST00000463428 NGEFQ8N5V2 710 aa18.29■□□□□ 0.52
PHACTR4-203ENST00000463428 IL17REQ8NFR9 667 aa18.29■□□□□ 0.52
PHACTR4-203ENST00000463428 SCN11AQ9UI33 1791 aa18.28■□□□□ 0.52
PHACTR4-203ENST00000463428 KDM6AO15550 1401 aaPredicted RBP18.28■□□□□ 0.52
PHACTR4-203ENST00000463428 PDE3BQ13370 1112 aa18.27■□□□□ 0.52
PHACTR4-203ENST00000463428 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.52
PHACTR4-203ENST00000463428 LGR6Q9HBX8 967 aa18.27■□□□□ 0.52
PHACTR4-203ENST00000463428 RNMTO43148 476 aaKnown RBP18.26■□□□□ 0.51
PHACTR4-203ENST00000463428 HNRNPUQ00839 825 aaKnown RBP eCLIP18.26■□□□□ 0.51
PHACTR4-203ENST00000463428 DCTN1Q14203 1278 aa18.26■□□□□ 0.51
PHACTR4-203ENST00000463428 SALL2Q9Y467 1007 aaPredicted RBP18.26■□□□□ 0.51
PHACTR4-203ENST00000463428 ZNF521Q96K83 1311 aa18.26■□□□□ 0.51
PHACTR4-203ENST00000463428 CEMIPQ8WUJ3 1361 aa18.26■□□□□ 0.51
PHACTR4-203ENST00000463428 HSP90AB1P08238 724 aaKnown RBP18.25■□□□□ 0.51
PHACTR4-203ENST00000463428 MCM10Q7L590 875 aa18.25■□□□□ 0.51
PHACTR4-203ENST00000463428 WWC1Q8IX03 1113 aa18.25■□□□□ 0.51
PHACTR4-203ENST00000463428 DCAF5Q96JK2 942 aa18.25■□□□□ 0.51
PHACTR4-203ENST00000463428 TOGARAM1Q9Y4F4 1720 aa18.25■□□□□ 0.51
PHACTR4-203ENST00000463428 BCL9O00512 1426 aa18.24■□□□□ 0.51
PHACTR4-203ENST00000463428 LMOD3Q0VAK6 560 aa18.24■□□□□ 0.51
PHACTR4-203ENST00000463428 KRT27Q7Z3Y8 459 aa18.24■□□□□ 0.51
PHACTR4-203ENST00000463428 RTF1Q92541 710 aaKnown RBP18.24■□□□□ 0.51
PHACTR4-203ENST00000463428 THUMPD2Q9BTF0 503 aaKnown RBP18.23■□□□□ 0.51
PHACTR4-203ENST00000463428 KAT6BQ8WYB5 2073 aa18.23■□□□□ 0.51
PHACTR4-203ENST00000463428 FAM182BQ5T319 152 aa18.23■□□□□ 0.51
PHACTR4-203ENST00000463428 ITGB4P16144 1822 aa18.22■□□□□ 0.51
PHACTR4-203ENST00000463428 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
PHACTR4-203ENST00000463428 SBF2Q86WG5 1849 aa18.22■□□□□ 0.51
PHACTR4-203ENST00000463428 ERVV-2B6SEH9 535 aa18.21■□□□□ 0.51
PHACTR4-203ENST00000463428 DOT1LQ8TEK3 1739 aa18.21■□□□□ 0.51
PHACTR4-203ENST00000463428 MRC1P22897 1456 aa18.21■□□□□ 0.51
PHACTR4-203ENST00000463428 ZBED9Q6R2W3 1325 aa18.2■□□□□ 0.5
PHACTR4-203ENST00000463428 WDR63Q8IWG1 891 aa18.2■□□□□ 0.5
PHACTR4-203ENST00000463428 SLC52A2Q9HAB3 445 aa18.19■□□□□ 0.5
PHACTR4-203ENST00000463428 YTHDC1Q96MU7 727 aaKnown RBP18.18■□□□□ 0.5
PHACTR4-203ENST00000463428 IL16Q14005 1332 aa18.18■□□□□ 0.5
PHACTR4-203ENST00000463428 ZNF853P0CG23 659 aa18.17■□□□□ 0.5
PHACTR4-203ENST00000463428 FAM196AQ6ZSG2 479 aa18.17■□□□□ 0.5
PHACTR4-203ENST00000463428 NFATC2IPQ8NCF5 419 aa18.17■□□□□ 0.5
PHACTR4-203ENST00000463428 SPINK5Q9NQ38 1064 aaPredicted RBP18.17■□□□□ 0.5
PHACTR4-203ENST00000463428 PRIM1P49642 420 aaKnown RBP18.16■□□□□ 0.5
PHACTR4-203ENST00000463428 TEFQ10587 303 aa18.16■□□□□ 0.5
PHACTR4-203ENST00000463428 TAF7Q15545 349 aaPredicted RBP18.16■□□□□ 0.5
PHACTR4-203ENST00000463428 ACSBG1Q96GR2 724 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms