RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 ANP32AP39687 249 aaKnown RBP12.94□□□□□ -0.34
MSH5-211ENST00000463144 USHBP1Q8N6Y0 703 aa12.94□□□□□ -0.34
MSH5-211ENST00000463144 GAS2L2Q8NHY3 880 aa12.94□□□□□ -0.34
MSH5-211ENST00000463144 PDZRN3Q9UPQ7 1066 aa12.94□□□□□ -0.34
MSH5-211ENST00000463144 KIAA0232Q92628 1395 aa12.94□□□□□ -0.34
MSH5-211ENST00000463144 RGPD2P0DJD1 1756 aa12.94□□□□□ -0.34
MSH5-211ENST00000463144 KCNH5Q8NCM2 988 aa12.93□□□□□ -0.34
MSH5-211ENST00000463144 STRCQ7RTU9 1775 aa12.93□□□□□ -0.34
MSH5-211ENST00000463144 SLIT3O75094 1523 aa12.93□□□□□ -0.34
MSH5-211ENST00000463144 ZBTB7BO15156 539 aaPredicted RBP12.93□□□□□ -0.34
MSH5-211ENST00000463144 GCP02774 474 aa12.93□□□□□ -0.34
MSH5-211ENST00000463144 HSPA2P54652 639 aa12.93□□□□□ -0.34
MSH5-211ENST00000463144 HDAC1Q13547 482 aaPredicted RBP12.93□□□□□ -0.34
MSH5-211ENST00000463144 KRT28Q7Z3Y7 464 aa12.93□□□□□ -0.34
MSH5-211ENST00000463144 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
MSH5-211ENST00000463144 RTF1Q92541 710 aaKnown RBP12.93□□□□□ -0.34
MSH5-211ENST00000463144 IPO9Q96P70 1041 aaKnown RBP12.93□□□□□ -0.34
MSH5-211ENST00000463144 LRRC37A3O60309 1634 aa12.93□□□□□ -0.34
MSH5-211ENST00000463144 ABCC4O15439 1325 aa12.93□□□□□ -0.34
MSH5-211ENST00000463144 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
MSH5-211ENST00000463144 MSH6P52701 1360 aa12.92□□□□□ -0.34
MSH5-211ENST00000463144 TMEM94Q12767 1356 aa12.92□□□□□ -0.34
MSH5-211ENST00000463144 HTATSF1O43719 755 aaKnown RBP12.92□□□□□ -0.34
MSH5-211ENST00000463144 NBPF6Q5VWK0 638 aa12.92□□□□□ -0.34
MSH5-211ENST00000463144 NBPF4Q96M43 638 aa12.92□□□□□ -0.34
MSH5-211ENST00000463144 ZBTB7CA1YPR0 619 aa12.91□□□□□ -0.34
MSH5-211ENST00000463144 GNAT3A8MTJ3 354 aa12.91□□□□□ -0.34
MSH5-211ENST00000463144 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
MSH5-211ENST00000463144 ANP32EQ9BTT0 268 aa12.91□□□□□ -0.34
MSH5-211ENST00000463144 MST1RQ04912 1400 aa12.91□□□□□ -0.34
MSH5-211ENST00000463144 USP19O94966 1318 aa12.91□□□□□ -0.34
MSH5-211ENST00000463144 PLEKHG5O94827 1062 aa12.91□□□□□ -0.34
MSH5-211ENST00000463144 IL17REQ8NFR9 667 aa12.91□□□□□ -0.34
MSH5-211ENST00000463144 LMOD2Q6P5Q4 547 aa12.9□□□□□ -0.34
MSH5-211ENST00000463144 TSPYL4Q9UJ04 414 aa12.9□□□□□ -0.34
MSH5-211ENST00000463144 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.34
MSH5-211ENST00000463144 ALS2Q96Q42 1657 aa12.9□□□□□ -0.34
MSH5-211ENST00000463144 LRRC59Q96AG4 307 aaKnown RBP12.9□□□□□ -0.35
MSH5-211ENST00000463144 API5Q9BZZ5 524 aaKnown RBP12.9□□□□□ -0.35
MSH5-211ENST00000463144 MAP3K5Q99683 1374 aa12.89□□□□□ -0.35
MSH5-211ENST00000463144 RGS12O14924 1447 aa12.89□□□□□ -0.35
MSH5-211ENST00000463144 SMC5Q8IY18 1101 aa12.89□□□□□ -0.35
MSH5-211ENST00000463144 ATF3P18847 181 aa12.88□□□□□ -0.35
MSH5-211ENST00000463144 DDX17Q92841 729 aaKnown RBP12.88□□□□□ -0.35
MSH5-211ENST00000463144 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
MSH5-211ENST00000463144 AXIN2Q9Y2T1 843 aa12.88□□□□□ -0.35
MSH5-211ENST00000463144 MED1Q15648 1581 aaPredicted RBP12.88□□□□□ -0.35
MSH5-211ENST00000463144 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
MSH5-211ENST00000463144 C1orf115Q9H7X2 142 aa12.87□□□□□ -0.35
MSH5-211ENST00000463144 NOP58Q9Y2X3 529 aaKnown RBP12.87□□□□□ -0.35
MSH5-211ENST00000463144 DCCP43146 1447 aa12.87□□□□□ -0.35
MSH5-211ENST00000463144 RGPD5Q99666 1765 aa12.87□□□□□ -0.35
MSH5-211ENST00000463144 XIRP1Q702N8 1843 aaKnown RBP12.87□□□□□ -0.35
MSH5-211ENST00000463144 NCAPD2Q15021 1401 aa12.86□□□□□ -0.35
MSH5-211ENST00000463144 INTS3Q68E01 1043 aaKnown RBP12.86□□□□□ -0.35
MSH5-211ENST00000463144 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
MSH5-211ENST00000463144 SIRT2Q8IXJ6 389 aa12.86□□□□□ -0.35
MSH5-211ENST00000463144 TAF7Q15545 349 aaPredicted RBP12.85□□□□□ -0.35
MSH5-211ENST00000463144 G2E3Q7L622 706 aa12.85□□□□□ -0.35
MSH5-211ENST00000463144 ANKRD24Q8TF21 1146 aa12.85□□□□□ -0.35
MSH5-211ENST00000463144 CEMIPQ8WUJ3 1361 aa12.85□□□□□ -0.35
MSH5-211ENST00000463144 SEC24BO95487 1268 aa12.85□□□□□ -0.35
MSH5-211ENST00000463144 CHMP4BQ9H444 224 aaKnown RBP12.85□□□□□ -0.35
MSH5-211ENST00000463144 LGR6Q9HBX8 967 aa12.85□□□□□ -0.35
MSH5-211ENST00000463144 ZBTB47Q9UFB7 747 aaPredicted RBP12.85□□□□□ -0.35
MSH5-211ENST00000463144 CAMTA1Q9Y6Y1 1673 aa12.85□□□□□ -0.35
MSH5-211ENST00000463144 LMO7Q8WWI1 1683 aa12.84□□□□□ -0.35
MSH5-211ENST00000463144 PTPRCP08575 1304 aa12.84□□□□□ -0.35
MSH5-211ENST00000463144 ZC3H6P61129 1189 aaKnown RBP12.83□□□□□ -0.35
MSH5-211ENST00000463144 NUCB1Q02818 461 aa12.83□□□□□ -0.35
MSH5-211ENST00000463144 ERICH6Q7L0X2 663 aa12.83□□□□□ -0.35
MSH5-211ENST00000463144 CADPS2Q86UW7 1296 aa12.83□□□□□ -0.35
MSH5-211ENST00000463144 BABAM1Q9NWV8 329 aa12.83□□□□□ -0.35
MSH5-211ENST00000463144 FAM208AQ9UK61 1670 aaKnown RBP12.82□□□□□ -0.36
MSH5-211ENST00000463144 COL18A1P39060 1754 aa12.81□□□□□ -0.36
MSH5-211ENST00000463144 PXDNQ92626 1479 aa12.81□□□□□ -0.36
MSH5-211ENST00000463144 PLEKHO1Q53GL0 409 aaPredicted RBP12.81□□□□□ -0.36
MSH5-211ENST00000463144 AKAP4Q5JQC9 854 aa12.81□□□□□ -0.36
MSH5-211ENST00000463144 ZNF530Q6P9A1 599 aaPredicted RBP12.81□□□□□ -0.36
MSH5-211ENST00000463144 KDM3BQ7LBC6 1761 aa12.81□□□□□ -0.36
MSH5-211ENST00000463144 ERBB3P21860 1342 aa12.8□□□□□ -0.36
MSH5-211ENST00000463144 NPHP3Q7Z494 1330 aa12.8□□□□□ -0.36
MSH5-211ENST00000463144 F6X3S4 739 aa12.8□□□□□ -0.36
MSH5-211ENST00000463144 CHD1LQ86WJ1 897 aa12.8□□□□□ -0.36
MSH5-211ENST00000463144 CABLES1Q8TDN4 633 aa12.8□□□□□ -0.36
MSH5-211ENST00000463144 NECTIN2Q92692 538 aa12.8□□□□□ -0.36
MSH5-211ENST00000463144 LNPKQ9C0E8 428 aa12.8□□□□□ -0.36
MSH5-211ENST00000463144 CRYBG1Q9Y4K1 1723 aa12.8□□□□□ -0.36
MSH5-211ENST00000463144 AMOTQ4VCS5 1084 aa12.79□□□□□ -0.36
MSH5-211ENST00000463144 CCDC30Q5VVM6 783 aa12.79□□□□□ -0.36
MSH5-211ENST00000463144 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
MSH5-211ENST00000463144 GCC1Q96CN9 775 aa12.79□□□□□ -0.36
MSH5-211ENST00000463144 TNS3Q68CZ2 1445 aa12.79□□□□□ -0.36
MSH5-211ENST00000463144 ATP10DQ9P241 1426 aa12.79□□□□□ -0.36
MSH5-211ENST00000463144 MEIS3Q99687 375 aa12.79□□□□□ -0.36
MSH5-211ENST00000463144 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
MSH5-211ENST00000463144 CACNA1FO60840 1977 aa12.79□□□□□ -0.36
MSH5-211ENST00000463144 KCNQ3O43525 872 aa12.78□□□□□ -0.36
MSH5-211ENST00000463144 EIF4A1P60842 406 aaKnown RBP12.78□□□□□ -0.36
MSH5-211ENST00000463144 STK31Q9BXU1 1019 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms